iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-109478

Ensembl Protein ID

EFJ04889

UniProt Accession

D8TEM6; D8TEM6_SELML

Genbank Protein ID

EFJ04889.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377745

Gene Name

SELMODRAFT_138092

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_138092	EFJ04889	EFJ04889

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-10	41.3	29	59

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH++ v+cla+  d ++++sG+ D+ti vW 
   Q: 29   GHKGAVYCLAYsRDgKRFASGGADKTIIVWT 59
           8***********888***************5 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

DGSQLIAAVG SRVLMYDAAT GDLLHSLKGH KGAVYCLAYS RDGKRFASGG ADKTIIVWTY 60
KARGAAAQLL LLTCILKYSH AHSIQCLAYN PVTQQLASGT ASDFGIWSPE QKSVLKHTTV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATGGAAGCC AGCTTATTGC TGCAGTGGGT AGCCGAGTCC TCATGTATGA TGCAGCAACC 60
GGCGACCTTC TGCATTCGCT CAAAGGTGGA AGGATGGACA GATCCCCCTT TATAATGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_138092

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	39.26	0.00e+00	763.00
IUUC-Apl-003504	Anas platyrhynchos	42.83	0.00e+00	988.00
IUUC-Aca-004767	Anolis carolinensis	38.81	0.00e+00	916.00
IUUC-Ame-011642	Astyanax mexicanus	36.57	0.00e+00	830.00
IUUC-Bta-012969	Bos taurus	39.04	0.00e+00	763.00
IUUC-Cel-018670	Caenorhabditis elegans	30.21	8.00e-170	590.00
IUUC-Cfa-020915	Canis familiaris	39.36	0.00e+00	767.00
IUUC-Cpo-021888	Cavia porcellus	41.05	0.00e+00	942.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	42.83	0.00e+00	961.00
IUUC-Cin-025121	Ciona intestinalis	37.98	0.00e+00	843.00
IUUC-Csv-026240	Ciona savignyi	36.52	0.00e+00	810.00
IUUC-Dno-029685	Dasypus novemcinctus	41.84	0.00e+00	952.00
IUUC-Ete-032682	Echinops telfairi	39.04	0.00e+00	650.00
IUUC-Eca-033831	Equus caballus	39.54	0.00e+00	771.00
IUUC-Fal-037340	Ficedula albicollis	42.28	0.00e+00	970.00
IUUC-Gga-040595	Gallus gallus	42.87	0.00e+00	991.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	40.96	0.00e+00	682.00
IUUC-Lch-050183	Latimeria chalumnae	34.79	6.00e-123	434.00
IUUC-Loc-052049	Lepisosteus oculatus	41.91	0.00e+00	977.00
IUUC-Meu-056446	Macropus eugenii	50.00	4.00e-137	482.00
IUUC-Mga-059296	Meleagris gallopavo	40.28	0.00e+00	786.00
IUUC-Mdo-062115	Monodelphis domestica	39.56	0.00e+00	773.00
IUUC-Mpu-066136	Mustela putorius furo	36.68	0.00e+00	687.00
IUUC-Ont-072080	Oreochromis niloticus	38.22	0.00e+00	909.00
IUUC-Oan-072891	Ornithorhynchus anatinus	52.38	2.00e-159	554.00
IUUC-Ola-086538	Oryzias latipes	38.10	0.00e+00	760.00
IUUC-Oga-088722	Otolemur garnettii	39.09	0.00e+00	748.00
IUUC-Oar-089249	Ovis aries	41.76	0.00e+00	951.00
IUUC-Psi-093335	Pelodiscus sinensis	42.03	0.00e+00	957.00
IUUC-Pma-094520	Petromyzon marinus	39.84	0.00e+00	841.00
IUUC-Ppa-095600	Physcomitrella patens	78.95	2.00e-38	149.00
IUUC-Pfo-096526	Poecilia formosa	34.18	0.00e+00	745.00
IUUC-Pca-100233	Procavia capensis	42.89	2.00e-114	406.00
IUUC-Pva-103064	Pteropus vampyrus	46.39	5.00e-117	415.00
IUUC-Sha-106649	Sarcophilus harrisii	39.25	0.00e+00	762.00
IUUC-Tgu-116870	Taeniopygia guttata	39.16	0.00e+00	892.00
IUUC-Tru-118661	Takifugu rubripes	38.27	0.00e+00	895.00
IUUC-Tsy-119640	Tarsius syrichta	45.51	7.00e-41	162.00
IUUC-Tni-120812	Tetraodon nigroviridis	35.83	0.00e+00	805.00
IUUC-Vpa-130049	Vicugna pacos	37.68	5.00e-97	348.00
IUUC-Xtr-131914	Xenopus tropicalis	41.03	0.00e+00	942.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence