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Tag Content
iUUCD ID IUUC-Lch-050067
Ensembl Protein ID ENSLACP00000003496.1
UniProt Accession H3A1H5; H3A1H5_LATCH
Genbank Protein ID ENSLACP00000003496
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01171447
Gene Name POC1B
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000003118.1 ENSLACT00000003527.1 ENSLACP00000003496.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.80e-51 170.0 142 173
UBD/Beta-Prp 4.00e-81 272.7 63 320
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
    +Ht++v+c +f +d +l++s+sdD+t+++WD+
   Q: 142 QHTNWVRCARFsPDgRLIASCSDDKTVRIWDI 173
    5***********999****************7 PP
   


   UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
    it+v+fsp+++l+a++srd+ti++w + ++ h+a+v++v+fs+dg+ lvt+s+D+ ikvw++ + + +l++h++ v++ +
   Q: 63 ITSVQFSPSGNLVASASRDKTIRLWVPNIKGESTVYKAHTATVRSVSFSSDGQCLVTASDDKSIKVWSVHRRRFLFSLNQHTNWVRCAR 151
    89***********************99998887777***************************************************** PP
   S: 102 fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
    fsp+g ++s s+d+t+r+wd++++ c++ t++ g+ ++v ++p+g +++s + D+t++lWd++++kll++ + h + ++lsf++
   Q: 152 FSPDGRLIASCSDDKTVRIWDISNRMCIN-TFTDSGGFASYVDFNPSGTCVASTGWDNTLNLWDIRMNKLLQHYQV-HSGVTNCLSFHP 238
    *****************************.*********************************************8.************ PP
   S: 191 ngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW..dlrsgdllktlqlhnssvisv 270
    +g++l+++s+d+t+k+ dl +g+ ++tl+gh+ +v+ v+fs+ +e+++sg++D ++++W + + ++ + l++hn++++
   Q: 239 TGNYLITASDDSTLKILDLLEGRLIYTLHGHEGPVLTVAFSRGGEYFASGGHDAQVFLWktNFDAFNYKQILKNHNKRISLD 320
    ****************************************************************************998764 PP
   

Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MASVLEDPTL ERHFKGHKDV VTSVDFNPNT KQLASASKDT FLMIWNLKPQ TKAYRFLGHR 60
EAITSVQFSP SGNLVASASR DKTIRLWVPN IKGESTVYKA HTATVRSVSF SSDGQCLVTA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Lch-050067|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAAAAAGTGA AGGCTGGGCT TTAAGAAATT TTAAAATTTG AGTCCCCCTT GTTAAAGAGA 60
CAGCATTGAC TTTTGGAGAT TTAAAAAGAG CTCTCCAGAC AATACCAAAT GTATTAAACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Lch-050067|E3,WD_repeat;UBD,Beta-Prp|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0060271--P:cilium assembly
GO:0060287--P:epithelial cilium movement involved in determination of left/right asymmetry
GO:0007507--P:heart development
GO:0007634--P:optokinetic behavior
GO:0003014--P:renal system process
GO:0010842--P:retina layer formation

KEGG lcm:102352521
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002219 Ailuropoda melanoleuca 57.84 2.00e-158 551.00
IUUC-Apl-004219 Anas platyrhynchos 61.59 5.00e-164 570.00
IUUC-Aca-005197 Anolis carolinensis 56.53 7.00e-164 570.00
IUUC-Ame-011000 Astyanax mexicanus 62.14 1.00e-179 622.00
IUUC-Bta-012706 Bos taurus 59.05 1.00e-171 595.00
IUUC-Cja-019185 Callithrix jacchus 57.58 3.00e-155 541.00
IUUC-Cfa-021274 Canis familiaris 59.79 5.00e-171 593.00
IUUC-Cpo-022351 Cavia porcellus 58.52 3.00e-170 591.00
IUUC-Csa-023032 Chlorocebus sabaeus 57.02 1.00e-161 562.00
IUUC-Cho-024508 Choloepus hoffmanni 51.91 1.00e-122 432.00
IUUC-Dre-028703 Danio rerio 61.92 2.00e-176 612.00
IUUC-Dno-028915 Dasypus novemcinctus 60.14 9.00e-162 563.00
IUUC-Ete-032353 Echinops telfairi 49.47 1.00e-130 459.00
IUUC-Eca-034136 Equus caballus 57.39 7.00e-158 550.00
IUUC-Eeu-034611 Erinaceus europaeus 52.63 3.00e-115 408.00
IUUC-Fca-036205 Felis catus 56.95 1.00e-153 535.00
IUUC-Fal-036947 Ficedula albicollis 52.77 2.00e-141 495.00
IUUC-Gga-040847 Gallus gallus 60.08 4.00e-168 583.00
IUUC-Ggo-045194 Gorilla gorilla 58.88 7.00e-172 596.00
IUUC-Hsa-047026 Homo sapiens 59.09 5.00e-172 597.00
IUUC-Itr-048943 Ictidomys tridecemlineatus 57.52 2.00e-153 535.00
IUUC-Loc-052409 Lepisosteus oculatus 67.84 0.00e+00 679.00
IUUC-Laf-053428 Loxodonta africana 61.10 8.00e-172 596.00
IUUC-Mcc-054772 Macaca mulatta 59.71 6.00e-174 603.00
IUUC-Meu-056496 Macropus eugenii 59.67 2.00e-130 458.00
IUUC-Mga-059276 Meleagris gallopavo 58.66 3.00e-169 587.00
IUUC-Mmr-061525 Microcebus murinus 59.18 9.00e-172 596.00
IUUC-Mdo-062351 Monodelphis domestica 57.37 3.00e-164 571.00
IUUC-Mmu-063834 Mus musculus 57.70 2.00e-163 568.00
IUUC-Mpu-066453 Mustela putorius furo 59.83 2.00e-169 588.00
IUUC-Mlu-067909 Myotis lucifugus 58.04 2.00e-157 548.00
IUUC-Nle-069206 Nomascus leucogenys 59.71 4.00e-174 604.00
IUUC-Opr-070566 Ochotona princeps 52.64 1.00e-139 489.00
IUUC-Oan-073726 Ornithorhynchus anatinus 60.36 3.00e-161 561.00
IUUC-Ocu-074639 Oryctolagus cuniculus 58.88 2.00e-170 591.00
IUUC-Ola-086913 Oryzias latipes 56.85 4.00e-158 550.00
IUUC-Oga-088061 Otolemur garnettii 67.05 2.00e-147 514.00
IUUC-Oar-090228 Ovis aries 55.95 2.00e-169 588.00
IUUC-Ptr-091420 Pan troglodytes 59.09 2.00e-172 598.00
IUUC-Pan-092228 Papio anubis 59.50 1.00e-173 602.00
IUUC-Psi-093309 Pelodiscus sinensis 63.69 8.00e-175 606.00
IUUC-Pab-098109 Pongo abelii 59.09 2.00e-172 598.00
IUUC-Pva-102712 Pteropus vampyrus 59.30 2.00e-173 601.00
IUUC-Rno-105260 Rattus norvegicus 57.38 1.00e-163 569.00
IUUC-Sar-113446 Sorex araneus 53.40 9.00e-149 520.00
IUUC-Ssc-115794 Sus scrofa 66.48 5.00e-156 543.00
IUUC-Tgu-116770 Taeniopygia guttata 52.71 1.00e-141 496.00
IUUC-Tru-117968 Takifugu rubripes 58.73 5.00e-159 553.00
IUUC-Tsy-119316 Tarsius syrichta 51.11 3.00e-128 451.00
IUUC-Tni-119953 Tetraodon nigroviridis 55.65 6.00e-147 513.00
IUUC-Tbe-128071 Tupaia belangeri 54.75 7.00e-140 490.00
IUUC-Ttr-129267 Tursiops truncatus 57.61 5.00e-168 583.00
IUUC-Vpa-130823 Vicugna pacos 59.33 1.00e-128 453.00
IUUC-Xtr-131768 Xenopus tropicalis 62.76 0.00e+00 630.00
Created Date 25-Jun-2017

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