iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mdo-062351

UUCD1 version

UUC-MoD-00309

Ensembl Protein ID

ENSMODP00000012370.3

UniProt Accession

F6VD42; F6VD42_MONDO

Protein Name

Uncharacterized protein

Gene Name

POC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000009882.3	ENSMODT00000012595.3	ENSMODP00000012370.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-54	178.3	143	174
UBD/Beta-Prp	2.90e-71	240.2	98	358

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht +v+c +f  d +l+vs+s D+t+k+WD+ 
   Q: 143  HTHWVCCAKFsADgRLIVSCSEDKTVKIWDTN 174
           9**********666****************75 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghe 94
           +++h++++++v+fs d+++lat+s+d++ikvw++ ++ +l sl+ h+  v + kfs dg ++v++seD+t+k+wd ++  c+ +++  e
   Q: 98   FKAHTAPVRSVDFSCDGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVCCAKFSADGRLIVSCSEDKTVKIWDTNNKLCINSFTDSE 186
           679999*********************************************************************************** PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsv 183
             +  +sf+psg  ++s+++d t+++wd++ ++ l+   ++h+g+vnc+++hp+gn+l+++s D+t+++ dl  g+l++tl+g ht++v
   Q: 187  GFANFVSFNPSGTCIASAGSDHTVKLWDIRVNKLLQ-NYQVHSGAVNCLSFHPSGNYLITASSDGTLKILDLVEGRLIYTLQG-HTGPV 273
           ***********************************9.*********************************************9.***** PP
   S: 184  yslsfdsngkelvsgsldgtvklwdlqtgec.........................vrtlnghtdnvksvrfspnderlvsgssD 243
             +sf++ g+++ sg+ d ++ lw     e+                          rt + h++ + sv+  p+ e +   +sD
   Q: 274  FAVSFSKGGQQFTSGGADAQILLWKTNFDEMsykdllkknikrlhfdapphlldiyPRTAHHHDRKPDSVEINPKLEVVNLQTSD 358
           ************************9984443333334444455666666666665556666666666666666655555555555 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MAFAPEDPIL ERYFKGHKAA VTSVDFSPSA KRLASASWDT FLMLWDFKPQ PKAFRYVGHK 60
DVVTSVQFSP LGNLVASASR DRTVRLWIPD RKGKSSEFKA HTAPVRSVDF SCDGQFLATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTTCG CTCCGGTAAG GATGGATAGG CTTGGGTGGG GAGAGTGAGG GGGGGGGGGG 60
GCNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000922--C:spindle pole
GO:0008283--P:cell proliferation
GO:0060271--P:cilium assembly
GO:0001895--P:retina homeostasis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002219	Ailuropoda melanoleuca	71.10	0.00e+00	688.00
IUUC-Apl-004219	Anas platyrhynchos	58.69	1.00e-155	542.00
IUUC-Aca-005197	Anolis carolinensis	55.77	7.00e-162	563.00
IUUC-Ame-011000	Astyanax mexicanus	51.29	7.00e-142	496.00
IUUC-Bta-012706	Bos taurus	72.53	0.00e+00	744.00
IUUC-Cja-019185	Callithrix jacchus	67.06	0.00e+00	668.00
IUUC-Cfa-021274	Canis familiaris	72.26	0.00e+00	735.00
IUUC-Cpo-022351	Cavia porcellus	68.84	0.00e+00	704.00
IUUC-Csa-023032	Chlorocebus sabaeus	66.47	0.00e+00	664.00
IUUC-Cho-024508	Choloepus hoffmanni	66.07	3.00e-165	574.00
IUUC-Dre-028703	Danio rerio	61.54	5.00e-139	487.00
IUUC-Dno-028915	Dasypus novemcinctus	73.78	0.00e+00	705.00
IUUC-Dor-030306	Dipodomys ordii	60.13	1.00e-157	549.00
IUUC-Ete-032353	Echinops telfairi	60.84	2.00e-169	588.00
IUUC-Eca-034136	Equus caballus	71.97	0.00e+00	694.00
IUUC-Eeu-034611	Erinaceus europaeus	60.58	1.00e-138	485.00
IUUC-Fca-036205	Felis catus	70.11	0.00e+00	653.00
IUUC-Fal-036947	Ficedula albicollis	47.14	2.00e-127	449.00
IUUC-Gga-040847	Gallus gallus	56.83	4.00e-157	547.00
IUUC-Ggo-045194	Gorilla gorilla	71.01	0.00e+00	731.00
IUUC-Hsa-047026	Homo sapiens	71.20	0.00e+00	734.00
IUUC-Itr-048943	Ictidomys tridecemlineatus	69.54	0.00e+00	674.00
IUUC-Lch-050067	Latimeria chalumnae	57.25	3.00e-167	581.00
IUUC-Loc-052409	Lepisosteus oculatus	55.53	2.00e-160	558.00
IUUC-Laf-053428	Loxodonta africana	72.42	0.00e+00	736.00
IUUC-Mcc-054772	Macaca mulatta	71.79	0.00e+00	738.00
IUUC-Meu-056496	Macropus eugenii	87.67	0.00e+00	666.00
IUUC-Mga-059276	Meleagris gallopavo	55.34	7.00e-158	550.00
IUUC-Mmr-061525	Microcebus murinus	71.94	0.00e+00	733.00
IUUC-Mmu-063834	Mus musculus	67.65	0.00e+00	687.00
IUUC-Mpu-066453	Mustela putorius furo	69.20	0.00e+00	724.00
IUUC-Mlu-067909	Myotis lucifugus	70.61	0.00e+00	676.00
IUUC-Nle-069206	Nomascus leucogenys	70.81	0.00e+00	730.00
IUUC-Opr-070566	Ochotona princeps	61.16	1.00e-171	596.00
IUUC-Ont-072587	Oreochromis niloticus	59.07	1.00e-132	466.00
IUUC-Oan-073726	Ornithorhynchus anatinus	65.30	4.00e-173	600.00
IUUC-Ocu-074639	Oryctolagus cuniculus	72.39	0.00e+00	738.00
IUUC-Ola-086913	Oryzias latipes	46.25	8.00e-125	440.00
IUUC-Oga-088061	Otolemur garnettii	80.64	1.00e-174	605.00
IUUC-Oar-090228	Ovis aries	72.50	0.00e+00	748.00
IUUC-Ptr-091420	Pan troglodytes	71.20	0.00e+00	733.00
IUUC-Pan-092228	Papio anubis	71.60	0.00e+00	736.00
IUUC-Psi-093309	Pelodiscus sinensis	59.40	3.00e-165	574.00
IUUC-Pab-098109	Pongo abelii	71.20	0.00e+00	733.00
IUUC-Pca-101012	Procavia capensis	55.03	1.00e-147	516.00
IUUC-Pva-102712	Pteropus vampyrus	72.28	0.00e+00	741.00
IUUC-Rno-105260	Rattus norvegicus	68.64	0.00e+00	709.00
IUUC-Sar-113446	Sorex araneus	63.51	0.00e+00	631.00
IUUC-Ssc-115794	Sus scrofa	83.29	0.00e+00	655.00
IUUC-Tgu-116770	Taeniopygia guttata	50.80	3.00e-139	488.00
IUUC-Tru-117968	Takifugu rubripes	49.71	6.00e-138	484.00
IUUC-Tsy-119316	Tarsius syrichta	59.83	3.00e-153	534.00
IUUC-Tbe-128071	Tupaia belangeri	68.02	1.00e-180	625.00
IUUC-Ttr-129267	Tursiops truncatus	71.74	0.00e+00	731.00
IUUC-Vpa-130823	Vicugna pacos	73.89	8.00e-160	556.00
IUUC-Xtr-131768	Xenopus tropicalis	56.04	8.00e-161	560.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence