iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121575

Ensembl Protein ID

EOX96162

UniProt Accession

A0A061DUX8; A0A061DUX8_THECC

Genbank Protein ID

EOX96162.1

Protein Name

Beige-related and WD-40 repeat-containing protein isoform 1

Genbank Nucleotide ID

CM001879

Gene Name

TCM_005474

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_005474	EOX96163	EOX96163
TCM_005474	EOX96162	EOX96162

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-07	30.8	2697	2728

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH ++vtcla+ sd ++lv+Gs+D t+ +W++
   Q: 2697 GHCAPVTCLALsSDsNYLVTGSRDTTVLLWRI 2728
           8***********999***************96 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEEEEEKKFG ETSVRGSDTP EVASVVDDRI GRSYQQNVNV TDGEEAIVRN DNAVPQGAHS 60
ASLIGDEDQF EPVSLENQDK AAGESGHADS NRSSNSDYER GSSGGVEEYS EHLTRTYGKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATAGTTA ATCTTGATTA TAAAAAATAT ATTATTAATT TGAGTGATGA TATTTGTATA 60
ATTATTGATG ACGTTCATTG ATATCAAATC CATTATGATA ATGGAAGTGT TTTAACAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001003	Aegilops tauschii	54.52	0.00e+00	2667.00
IUUC-Atr-002854	Amborella trichopoda	67.52	0.00e+00	1679.00
IUUC-Aly-006298	Arabidopsis lyrata	73.75	0.00e+00	3769.00
IUUC-Ath-006607	Arabidopsis thaliana	71.75	0.00e+00	3710.00
IUUC-Ame-011863	Astyanax mexicanus	35.19	1.00e-139	491.00
IUUC-Bdi-014211	Brachypodium distachyon	66.03	0.00e+00	3288.00
IUUC-Bol-016214	Brassica oleracea	73.01	0.00e+00	3756.00
IUUC-Bra-017047	Brassica rapa	72.94	0.00e+00	3787.00
IUUC-Cfa-020738	Canis familiaris	35.93	9.00e-137	481.00
IUUC-Cpo-022242	Cavia porcellus	36.91	2.00e-136	480.00
IUUC-Csa-023466	Chlorocebus sabaeus	36.73	2.00e-138	487.00
IUUC-Cho-024721	Choloepus hoffmanni	52.75	7.00e-99	355.00
IUUC-Dre-027616	Danio rerio	33.62	3.00e-139	490.00
IUUC-Dno-029597	Dasypus novemcinctus	37.97	2.00e-134	474.00
IUUC-Eca-033286	Equus caballus	35.95	6.00e-134	472.00
IUUC-Fca-035638	Felis catus	34.25	2.00e-136	481.00
IUUC-Fal-037533	Ficedula albicollis	39.04	6.00e-140	492.00
IUUC-Gma-044286	Glycine max	75.49	0.00e+00	4048.00
IUUC-Hsa-046607	Homo sapiens	36.89	8.00e-137	482.00
IUUC-Hvu-047804	Hordeum vulgare	61.30	7.00e-172	595.00
IUUC-Itr-048531	Ictidomys tridecemlineatus	36.60	2.00e-136	481.00
IUUC-Lch-049963	Latimeria chalumnae	33.04	1.00e-140	495.00
IUUC-Lpe-051515	Leersia perrieri	65.79	0.00e+00	3294.00
IUUC-Laf-053913	Loxodonta africana	36.34	2.00e-136	480.00
IUUC-Mcc-055769	Macaca mulatta	37.20	8.00e-138	485.00
IUUC-Meu-056286	Macropus eugenii	36.10	2.00e-134	473.00
IUUC-Mtr-057650	Medicago truncatula	71.24	0.00e+00	3784.00
IUUC-Mmr-061713	Microcebus murinus	36.77	9.00e-136	478.00
IUUC-Mac-065578	Musa acuminata	71.33	0.00e+00	3514.00
IUUC-Mpu-066234	Mustela putorius furo	38.07	3.00e-141	496.00
IUUC-Mlu-067920	Myotis lucifugus	36.29	1.00e-134	474.00
IUUC-Opr-070275	Ochotona princeps	46.53	1.00e-118	421.00
IUUC-Ocu-074927	Oryctolagus cuniculus	36.91	3.00e-137	483.00
IUUC-Oba-075324	Oryza barthii	65.54	0.00e+00	3282.00
IUUC-Obr-076283	Oryza brachyantha	66.10	0.00e+00	3344.00
IUUC-Ogl-077738	Oryza glaberrima	58.18	0.00e+00	2859.00
IUUC-Ogu-078046	Oryza glumaepatula	65.43	0.00e+00	3274.00
IUUC-Oin-079301	Oryza indica	65.79	0.00e+00	3288.00
IUUC-Olo-080322	Oryza longistaminata	61.11	0.00e+00	3029.00
IUUC-Ome-081680	Oryza meridionalis	65.40	0.00e+00	3266.00
IUUC-Oni-082114	Oryza nivara	65.48	0.00e+00	2990.00
IUUC-Opu-083624	Oryza punctata	65.47	0.00e+00	3023.00
IUUC-Oru-084853	Oryza rufipogon	64.95	0.00e+00	3284.00
IUUC-Osa-085661	Oryza sativa	55.54	0.00e+00	2024.00
IUUC-Ola-086673	Oryzias latipes	33.30	1.00e-134	475.00
IUUC-Oga-089117	Otolemur garnettii	36.74	1.00e-136	481.00
IUUC-Oar-089873	Ovis aries	36.45	6.00e-137	482.00
IUUC-Ptr-091015	Pan troglodytes	36.89	7.00e-137	482.00
IUUC-Pab-098213	Pongo abelii	37.01	4.00e-136	479.00
IUUC-Pop-099812	Populus trichocarpa	79.47	0.00e+00	1913.00
IUUC-Pca-100386	Procavia capensis	35.66	8.00e-130	458.00
IUUC-Ppe-102010	Prunus persica	79.65	0.00e+00	4153.00
IUUC-Pva-102854	Pteropus vampyrus	37.01	3.00e-131	462.00
IUUC-Rno-105792	Rattus norvegicus	37.31	2.00e-138	487.00
IUUC-Sit-110476	Setaria italica	65.48	0.00e+00	3183.00
IUUC-Sly-111319	Solanum lycopersicum	75.24	0.00e+00	2426.00
IUUC-Sar-113411	Sorex araneus	31.99	4.00e-120	425.00
IUUC-Sbi-113954	Sorghum bicolor	67.61	0.00e+00	1137.00
IUUC-Tsy-119218	Tarsius syrichta	36.34	2.00e-112	399.00
IUUC-Tni-120641	Tetraodon nigroviridis	34.40	2.00e-135	478.00
IUUC-Tae-125245	Triticum aestivum	64.10	0.00e+00	1493.00
IUUC-Tur-126576	Triticum urartu	63.74	0.00e+00	2921.00
IUUC-Tbe-127556	Tupaia belangeri	48.77	7.00e-101	361.00
IUUC-Ttr-128451	Tursiops truncatus	35.52	5.00e-134	472.00
IUUC-Vpa-130417	Vicugna pacos	49.87	3.00e-110	392.00
IUUC-Vvi-131542	Vitis vinifera	81.40	0.00e+00	2357.00
IUUC-Xma-133685	Xiphophorus maculatus	33.94	5.00e-139	489.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence