iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000003221.6	ENSGALT00000053720.1	ENSGALP00000044766.1
ENSGALG00000003221.6	ENSGALT00000086316.1	ENSGALP00000064540.1
ENSGALG00000003221.6	ENSGALT00000045626.2	ENSGALP00000043388.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-43	144.5	249	287
UBD/Beta-Prp	7.30e-75	252.3	33	322

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH ++v  +af +d t++vs+s D+++kvWD  t ++++
   Q: 249  GHGSWVLNVAFcPDdTHFVSSSSDKSVKVWDAGTRTCVH 287
           8***********777****************88877776 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkf....spdksllatgsrdgtikvwdvttgkl..lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtl 90
           +h++ i +v++    +++++ +++gs d+ +kvw++ ++kl   ++l+gh+ +v +v++s++g+i +++s D++i++wdl+tgk++ ++
   Q: 33   AHDDAIWSVAWgknkKDGSETVISGSLDDLVKVWKWNDEKLdlQWTLEGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSI 121
           67777777888877778899********************9999********************************************* PP
   S: 91   kghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltggh 179
            +   +++sl+fsp++++l++Gsh+  ++++ +etg++ +  l+ + +++ +++++pdg++l+sG+ D++++++d++tgkll+tl+g h
   Q: 122  DAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKKEY-SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG-H 208
           ****************************************.*********************************************9.* PP
   S: 180  tdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvi 268
             +++sl+f+++++ lv++s+dg++k++d+q+ +   tl gh ++v+ v+f+p+d+++vs ssD+s+++Wd  ++++++t+  h+++v+
   Q: 209  AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDAGTRTCVHTFFDHQDQVW 297
           ***************************************************************************************** PP
   S: 269  svavlsfgdnvlvlgsedskvniwkl 294
            v++ + +++++v++++d++++i+++
   Q: 298  GVKY-NGSGSKIVSVGDDQEIHIYDC 322
           ****.999****************97 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

ATAATAVGRV AVCGGPARAF LLRSLPRRHD HTAHDDAIWS VAWGKNKKDG SETVISGSLD 60
DLVKVWKWND EKLDLQWTLE GHQLGVVSVD ISHTGSIAAS SSLDAHIRLW DLETGKQIKS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTCCGGCTC GGGGCAGGGG GCGGAAAGGC AGCGCTGCAG CCCCGCGCGG AGAAGCCGCG 60
GCTCCGGGCA GAGCAGGGCA GCTGTGCCTC CGGACAGGAC CGCCGGCCCT TACAGGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	33.83	3.00e-46	178.00
IUUC-Aml-002245	Ailuropoda melanoleuca	93.49	1.00e-152	531.00
IUUC-Atr-003142	Amborella trichopoda	50.93	2.00e-37	148.00
IUUC-Apl-003179	Anas platyrhynchos	96.92	2.00e-157	548.00
IUUC-Aca-004880	Anolis carolinensis	91.10	5.00e-154	536.00
IUUC-Aly-005956	Arabidopsis lyrata	38.34	2.00e-56	212.00
IUUC-Ath-007230	Arabidopsis thaliana	37.50	3.00e-51	194.00
IUUC-Acl-008297	Aspergillus clavatus	29.87	2.00e-26	112.00
IUUC-Ame-011511	Astyanax mexicanus	84.49	1.00e-146	511.00
IUUC-Bgr-012189	Blumeria graminis	31.90	2.00e-30	126.00
IUUC-Bta-012936	Bos taurus	93.84	7.00e-153	532.00
IUUC-Bdi-015020	Brachypodium distachyon	37.85	6.00e-46	177.00
IUUC-Bol-015927	Brassica oleracea	38.14	5.00e-57	214.00
IUUC-Bra-017323	Brassica rapa	37.82	1.00e-56	213.00
IUUC-Cja-019961	Callithrix jacchus	93.49	2.00e-152	531.00
IUUC-Cfa-020862	Canis familiaris	93.15	1.00e-151	528.00
IUUC-Cpo-021356	Cavia porcellus	93.15	4.00e-152	530.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	41.20	1.00e-58	219.00
IUUC-Csa-024067	Chlorocebus sabaeus	93.15	9.00e-152	528.00
IUUC-Cho-024421	Choloepus hoffmanni	79.80	4.00e-80	290.00
IUUC-Cin-025261	Ciona intestinalis	63.70	5.00e-110	390.00
IUUC-Cgl-026446	Colletotrichum gloeosporioides	29.58	7.00e-29	120.00
IUUC-Cne-026846	Cryptococcus neoformans	27.92	6.00e-23	101.00
IUUC-Dre-027706	Danio rerio	64.78	9.00e-107	379.00
IUUC-Dno-029084	Dasypus novemcinctus	92.86	5.00e-151	526.00
IUUC-Dor-030353	Dipodomys ordii	81.68	4.00e-116	410.00
IUUC-Dse-031348	Dothistroma septosporum	30.80	4.00e-26	111.00
IUUC-Dme-031836	Drosophila melanogaster	51.10	6.00e-85	307.00
IUUC-Ete-032261	Echinops telfairi	90.41	2.00e-146	511.00
IUUC-Eca-034231	Equus caballus	85.27	9.00e-137	479.00
IUUC-Eeu-034828	Erinaceus europaeus	92.78	3.00e-149	520.00
IUUC-Fca-036569	Felis catus	93.84	2.00e-152	531.00
IUUC-Fal-037469	Ficedula albicollis	98.63	6.00e-161	559.00
IUUC-Gmo-039579	Gadus morhua	82.72	5.00e-141	493.00
IUUC-Gac-042100	Gasterosteus aculeatus	85.71	2.00e-145	507.00
IUUC-Gma-044408	Glycine max	41.03	9.00e-60	223.00
IUUC-Ggo-045227	Gorilla gorilla	93.49	2.00e-152	531.00
IUUC-Hsa-045839	Homo sapiens	93.49	2.00e-152	531.00
IUUC-Hvu-047591	Hordeum vulgare	37.74	2.00e-48	186.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	93.49	1.00e-152	531.00
IUUC-Lch-049549	Latimeria chalumnae	84.59	7.00e-142	496.00
IUUC-Lpe-050746	Leersia perrieri	38.26	4.00e-47	181.00
IUUC-Loc-052540	Lepisosteus oculatus	86.38	1.00e-145	508.00
IUUC-Lma-052992	Leptosphaeria maculans	29.73	6.00e-27	114.00
IUUC-Laf-053907	Loxodonta africana	93.49	1.00e-152	531.00
IUUC-Mcc-055828	Macaca mulatta	87.18	2.00e-148	517.00
IUUC-Meu-056075	Macropus eugenii	95.69	4.00e-136	476.00
IUUC-Mor-056971	Magnaporthe oryzae	31.84	4.00e-25	108.00
IUUC-Mtr-057728	Medicago truncatula	41.48	2.00e-58	218.00
IUUC-Mga-059872	Meleagris gallopavo	100.00	1.00e-162	565.00
IUUC-Mvi-060564	Microbotryum violaceum	32.55	5.00e-32	131.00
IUUC-Mmr-060985	Microcebus murinus	93.84	1.00e-152	531.00
IUUC-Mdo-062758	Monodelphis domestica	92.10	2.00e-153	534.00
IUUC-Mmu-063580	Mus musculus	91.10	4.00e-150	523.00
IUUC-Mac-064880	Musa acuminata	39.87	1.00e-57	216.00
IUUC-Mpu-066577	Mustela putorius furo	93.15	2.00e-151	528.00
IUUC-Nle-069573	Nomascus leucogenys	93.49	2.00e-152	531.00
IUUC-Opr-070216	Ochotona princeps	92.81	4.00e-152	530.00
IUUC-Ont-071981	Oreochromis niloticus	85.38	3.00e-147	513.00
IUUC-Oan-073223	Ornithorhynchus anatinus	96.46	6.00e-110	389.00
IUUC-Ocu-074199	Oryctolagus cuniculus	79.45	6.00e-124	436.00
IUUC-Oba-075255	Oryza barthii	40.00	4.00e-41	161.00
IUUC-Obr-076168	Oryza brachyantha	46.58	1.00e-34	139.00
IUUC-Ogl-077777	Oryza glaberrima	38.06	1.00e-47	183.00
IUUC-Ogu-078780	Oryza glumaepatula	38.06	1.00e-47	183.00
IUUC-Oin-079228	Oryza indica	38.06	2.00e-50	192.00
IUUC-Olo-080617	Oryza longistaminata	45.07	2.00e-28	117.00
IUUC-Ome-081421	Oryza meridionalis	38.06	4.00e-47	181.00
IUUC-Oni-082997	Oryza nivara	38.06	2.00e-50	192.00
IUUC-Opu-083931	Oryza punctata	38.39	9.00e-48	183.00
IUUC-Oru-084645	Oryza rufipogon	38.06	1.00e-47	183.00
IUUC-Osa-085842	Oryza sativa	38.06	2.00e-50	192.00
IUUC-Ola-086696	Oryzias latipes	87.67	1.00e-143	501.00
IUUC-Olu-087643	Ostreococcus lucimarinus	39.91	4.00e-41	160.00
IUUC-Oga-088272	Otolemur garnettii	93.13	2.00e-150	525.00
IUUC-Oar-089416	Ovis aries	93.84	7.00e-153	532.00
IUUC-Ptr-090944	Pan troglodytes	93.49	2.00e-152	531.00
IUUC-Pan-091861	Papio anubis	93.49	2.00e-152	531.00
IUUC-Psi-093750	Pelodiscus sinensis	97.26	3.00e-159	553.00
IUUC-Pma-094608	Petromyzon marinus	82.15	1.00e-132	465.00
IUUC-Pno-094832	Phaeosphaeria nodorum	36.81	5.00e-26	111.00
IUUC-Ppa-095737	Physcomitrella patens	39.74	1.00e-56	213.00
IUUC-Pfo-096479	Poecilia formosa	86.71	2.00e-140	491.00
IUUC-Pab-098179	Pongo abelii	93.49	2.00e-152	531.00
IUUC-Pop-099532	Populus trichocarpa	40.91	2.00e-56	212.00
IUUC-Pca-100664	Procavia capensis	80.62	2.00e-93	335.00
IUUC-Ppe-102056	Prunus persica	39.54	3.00e-57	214.00
IUUC-Pva-102859	Pteropus vampyrus	93.49	1.00e-151	528.00
IUUC-Pte-104236	Pyrenophora teres	36.26	3.00e-25	108.00
IUUC-Rno-105826	Rattus norvegicus	91.10	2.00e-149	521.00
IUUC-Sha-106660	Sarcophilus harrisii	93.47	1.00e-147	515.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	34.85	8.00e-35	140.00
IUUC-Spo-108244	Schizosaccharomyces pombe	32.84	1.00e-33	136.00
IUUC-Smo-109234	Selaginella moellendorffii	42.81	2.00e-61	229.00
IUUC-Sit-110048	Setaria italica	36.77	7.00e-40	157.00
IUUC-Sly-111618	Solanum lycopersicum	38.91	1.00e-52	199.00
IUUC-Stu-112543	Solanum tuberosum	38.59	3.00e-55	208.00
IUUC-Sar-113743	Sorex araneus	72.95	5.00e-116	410.00
IUUC-Sbi-114309	Sorghum bicolor	38.83	2.00e-41	162.00
IUUC-Ssc-115560	Sus scrofa	88.36	3.00e-141	493.00
IUUC-Tgu-117300	Taeniopygia guttata	98.97	2.00e-161	561.00
IUUC-Tru-117933	Takifugu rubripes	86.05	7.00e-147	512.00
IUUC-Tsy-119574	Tarsius syrichta	82.19	2.00e-128	451.00
IUUC-Tni-120191	Tetraodon nigroviridis	88.61	3.00e-114	404.00
IUUC-Tca-120983	Theobroma cacao	41.04	3.00e-58	218.00
IUUC-Tae-124056	Triticum aestivum	36.77	4.00e-48	184.00
IUUC-Tur-126711	Triticum urartu	36.66	7.00e-47	180.00
IUUC-Tme-127066	Tuber melanosporum	34.57	1.00e-35	143.00
IUUC-Tbe-127802	Tupaia belangeri	93.84	2.00e-152	531.00
IUUC-Ttr-128861	Tursiops truncatus	89.68	4.00e-52	197.00
IUUC-Vda-129720	Verticillium dahliae	29.97	5.00e-24	104.00
IUUC-Vpa-130618	Vicugna pacos	93.56	1.00e-126	444.00
IUUC-Vvi-130981	Vitis vinifera	40.71	2.00e-56	212.00
IUUC-Xtr-132460	Xenopus tropicalis	87.04	4.00e-144	503.00
IUUC-Xma-134154	Xiphophorus maculatus	86.71	1.00e-140	492.00
IUUC-Yli-134554	Yarrowia lipolytica	30.62	4.00e-23	101.00
IUUC-Zma-135097	Zea mays	36.15	2.00e-35	142.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence