iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135097

UUCD1 version

UUC-ZeM-01011

Ensembl Protein ID

Zm00001d048691_T001

UniProt Accession

A0A1D6PNQ5; A0A1D6PNQ5_MAIZE

Genbank Protein ID

AQK48475.1

Protein Name

WD repeat-containing protein VIP3

Genbank Nucleotide ID

CM000780

Gene Name

ZEAMMB73_Zm00001d048691

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d048691	Zm00001d048691_T001	Zm00001d048691_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.60e-30	103.5	137	162
UBD/Beta-Prp	4.00e-42	146.4	94	296

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sd.tllvsGsdDgtikvWD 29
           v ++a+ +d +ll++Gs Dgti v+D
   Q: 137  VLSVAWsPDgRLLACGSMDGTIAVYD 162
           789****999**************** PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheae............vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           l a+g+ +g++k+wd++++k++ sl    +e            v +v +spdg +l+ gs D+ti v+d    k +h+l+gh   v+s+ 
   Q: 94   LAAAGGGSGSVKLWDTEKWKAITSLAVPRPEgarpdktgsgkfVLSVAWSPDGRLLACGSMDGTIAVYDAVRMKFLHHLEGHHMPVRSMV 183
           5678999******************99999999********************************************************* PP
   S: 102  fsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           fsp + ++l ++ +d  ++++d +++  +    sgh ++v ++  +pdg  +++Gs DrtvrlWdl++ + ++t++  h d+v  ++f++
   Q: 184  FSPvDPHVLFTACDDCHVHIYDAREKGLVG-AMSGHASWVLSIDASPDGLAVATGSSDRTVRLWDLNMRTSVQTMSN-HSDQVWAVAFRP 271
           ***5559**********************9.********************************************87.************ PP
   S: 191  ng......kelvsgsldgtvklwdl 209
            g       +l+s+s+d++v l+d+
   Q: 272  PGgagvraGRLASASDDKSVSLYDY 296
           999****99***************8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MKLAGLKSVD GAHEESIWAA AWAPAADHRP TAVLLTGALD ETVRAWLPDD LAALGSPTRG 60
HALGVVSLAA HPAGSLAAAV SLDSFIRVFD GNALAAAGGG SGSVKLWDTE KWKAITSLAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCG CGGGGCTCAA GTCTGTGGAC GGCGCCCACG AGGAGTCCAT CTGGGCGGCG 60
GCGTGGGCGC CCGCCGCTGA CCACCGCCCC ACGGCGGTGC TCCTCACTGG CGCGCTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	90.58	2.00e-102	365.00
IUUC-Aml-002245	Ailuropoda melanoleuca	37.50	2.00e-39	155.00
IUUC-Atr-003142	Amborella trichopoda	68.18	1.00e-79	288.00
IUUC-Apl-003179	Anas platyrhynchos	37.05	2.00e-42	165.00
IUUC-Aca-004880	Anolis carolinensis	37.05	3.00e-46	177.00
IUUC-Aly-005956	Arabidopsis lyrata	63.78	2.00e-106	378.00
IUUC-Ath-007230	Arabidopsis thaliana	64.09	3.00e-99	354.00
IUUC-Acl-008297	Aspergillus clavatus	31.55	5.00e-16	78.20
IUUC-Ame-011511	Astyanax mexicanus	36.24	2.00e-42	165.00
IUUC-Bta-012936	Bos taurus	37.50	1.00e-39	155.00
IUUC-Bdi-015020	Brachypodium distachyon	81.06	8.00e-131	459.00
IUUC-Bol-016345	Brassica oleracea	64.40	1.00e-106	379.00
IUUC-Bra-017323	Brassica rapa	64.40	1.00e-106	379.00
IUUC-Cja-019961	Callithrix jacchus	37.50	2.00e-39	155.00
IUUC-Cfa-020862	Canis familiaris	37.50	2.00e-39	155.00
IUUC-Cpo-021356	Cavia porcellus	37.14	8.00e-40	156.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	42.20	1.00e-44	172.00
IUUC-Csa-024067	Chlorocebus sabaeus	37.50	2.00e-39	155.00
IUUC-Cho-024421	Choloepus hoffmanni	35.19	2.00e-19	88.20
IUUC-Cin-025261	Ciona intestinalis	35.46	6.00e-45	173.00
IUUC-Cne-026846	Cryptococcus neoformans	37.93	5.00e-24	104.00
IUUC-Dre-027706	Danio rerio	27.54	7.00e-23	100.00
IUUC-Dno-029084	Dasypus novemcinctus	37.23	3.00e-39	155.00
IUUC-Dor-030353	Dipodomys ordii	34.16	9.00e-30	123.00
IUUC-Dse-031348	Dothistroma septosporum	31.62	6.00e-18	84.30
IUUC-Dme-031836	Drosophila melanogaster	38.08	6.00e-47	180.00
IUUC-Ete-032261	Echinops telfairi	36.92	6.00e-39	153.00
IUUC-Eca-034231	Equus caballus	34.89	1.00e-30	126.00
IUUC-Eeu-034828	Erinaceus europaeus	37.41	7.00e-37	147.00
IUUC-Fca-036569	Felis catus	37.50	1.00e-39	155.00
IUUC-Fal-037469	Ficedula albicollis	36.33	2.00e-41	162.00
IUUC-Gmo-039579	Gadus morhua	37.50	5.00e-44	170.00
IUUC-Gga-040808	Gallus gallus	36.49	2.00e-41	162.00
IUUC-Gac-042100	Gasterosteus aculeatus	35.81	4.00e-42	164.00
IUUC-Gma-044408	Glycine max	65.33	3.00e-107	380.00
IUUC-Ggo-045227	Gorilla gorilla	37.50	2.00e-39	155.00
IUUC-Hsa-045839	Homo sapiens	37.50	2.00e-39	155.00
IUUC-Hvu-047591	Hordeum vulgare	80.12	3.00e-128	450.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	37.50	1.00e-39	155.00
IUUC-Lch-049549	Latimeria chalumnae	33.68	5.00e-37	147.00
IUUC-Lpe-050746	Leersia perrieri	78.70	9.00e-123	432.00
IUUC-Loc-052540	Lepisosteus oculatus	35.47	2.00e-38	152.00
IUUC-Laf-053907	Loxodonta africana	37.50	1.00e-39	155.00
IUUC-Mcc-055828	Macaca mulatta	34.49	4.00e-37	148.00
IUUC-Meu-056075	Macropus eugenii	38.96	3.00e-40	157.00
IUUC-Mor-056971	Magnaporthe oryzae	34.73	2.00e-18	86.30
IUUC-Mtr-057728	Medicago truncatula	63.16	1.00e-96	345.00
IUUC-Mga-059872	Meleagris gallopavo	36.49	9.00e-42	163.00
IUUC-Mmr-060985	Microcebus murinus	37.14	7.00e-39	153.00
IUUC-Mdo-062758	Monodelphis domestica	37.41	5.00e-43	167.00
IUUC-Mmu-063580	Mus musculus	37.82	2.00e-39	155.00
IUUC-Mac-064880	Musa acuminata	71.74	3.00e-121	427.00
IUUC-Mpu-066577	Mustela putorius furo	37.77	2.00e-39	155.00
IUUC-Nle-069573	Nomascus leucogenys	37.50	2.00e-39	155.00
IUUC-Opr-070216	Ochotona princeps	37.86	1.00e-39	156.00
IUUC-Ont-071981	Oreochromis niloticus	36.49	5.00e-43	167.00
IUUC-Oan-073223	Ornithorhynchus anatinus	40.76	1.00e-30	125.00
IUUC-Ocu-074199	Oryctolagus cuniculus	33.96	1.00e-30	126.00
IUUC-Oba-075255	Oryza barthii	72.00	2.00e-108	384.00
IUUC-Obr-076168	Oryza brachyantha	90.38	9.00e-106	375.00
IUUC-Ogl-077777	Oryza glaberrima	78.33	4.00e-122	430.00
IUUC-Ogu-078780	Oryza glumaepatula	78.33	4.00e-122	430.00
IUUC-Oin-079228	Oryza indica	78.02	3.00e-126	444.00
IUUC-Olo-080617	Oryza longistaminata	89.58	3.00e-76	276.00
IUUC-Ome-081421	Oryza meridionalis	78.02	6.00e-122	429.00
IUUC-Oni-082997	Oryza nivara	78.02	3.00e-126	444.00
IUUC-Opu-083931	Oryza punctata	82.92	3.00e-128	450.00
IUUC-Oru-084645	Oryza rufipogon	78.33	4.00e-122	430.00
IUUC-Osa-085842	Oryza sativa	78.02	3.00e-126	444.00
IUUC-Ola-086696	Oryzias latipes	35.81	4.00e-40	157.00
IUUC-Olu-087643	Ostreococcus lucimarinus	48.45	7.00e-45	172.00
IUUC-Oga-088272	Otolemur garnettii	38.55	4.00e-40	157.00
IUUC-Oar-089416	Ovis aries	37.50	1.00e-39	155.00
IUUC-Ptr-090944	Pan troglodytes	37.50	2.00e-39	155.00
IUUC-Pan-091861	Papio anubis	37.50	2.00e-39	155.00
IUUC-Psi-093750	Pelodiscus sinensis	36.15	4.00e-41	161.00
IUUC-Pma-094608	Petromyzon marinus	37.46	1.00e-35	143.00
IUUC-Ppa-095737	Physcomitrella patens	58.59	4.00e-93	333.00
IUUC-Pfo-096479	Poecilia formosa	36.15	2.00e-40	158.00
IUUC-Pab-098179	Pongo abelii	37.50	2.00e-39	155.00
IUUC-Pop-099532	Populus trichocarpa	63.39	3.00e-95	341.00
IUUC-Pca-100664	Procavia capensis	32.72	5.00e-17	80.90
IUUC-Ppe-102056	Prunus persica	64.40	7.00e-105	372.00
IUUC-Pva-102859	Pteropus vampyrus	37.14	2.00e-38	152.00
IUUC-Rno-105826	Rattus norvegicus	37.82	2.00e-39	155.00
IUUC-Sha-106660	Sarcophilus harrisii	37.05	1.00e-39	156.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	29.61	7.00e-19	87.00
IUUC-Spo-108244	Schizosaccharomyces pombe	30.43	2.00e-18	86.30
IUUC-Smo-109382	Selaginella moellendorffii	51.10	3.00e-78	284.00
IUUC-Sit-110048	Setaria italica	86.34	2.00e-126	444.00
IUUC-Sly-111249	Solanum lycopersicum	57.23	3.00e-92	330.00
IUUC-Stu-112659	Solanum tuberosum	58.15	1.00e-91	328.00
IUUC-Sar-113743	Sorex araneus	38.38	2.00e-24	105.00
IUUC-Sbi-114309	Sorghum bicolor	86.96	2.00e-128	451.00
IUUC-Ssc-115560	Sus scrofa	36.52	3.00e-35	141.00
IUUC-Tgu-117300	Taeniopygia guttata	36.15	2.00e-41	162.00
IUUC-Tru-117933	Takifugu rubripes	36.49	1.00e-43	169.00
IUUC-Tsy-119574	Tarsius syrichta	30.71	4.00e-22	97.80
IUUC-Tni-120191	Tetraodon nigroviridis	45.06	3.00e-36	144.00
IUUC-Tca-120983	Theobroma cacao	63.27	1.00e-97	348.00
IUUC-Tae-124056	Triticum aestivum	77.33	1.00e-127	448.00
IUUC-Tur-126711	Triticum urartu	76.47	5.00e-124	436.00
IUUC-Tbe-127802	Tupaia belangeri	37.50	1.00e-39	155.00
IUUC-Vda-129720	Verticillium dahliae	28.80	4.00e-14	71.60
IUUC-Vpa-130618	Vicugna pacos	38.97	1.00e-32	132.00
IUUC-Vvi-130981	Vitis vinifera	66.87	8.00e-102	362.00
IUUC-Xtr-132460	Xenopus tropicalis	36.69	3.00e-40	158.00
IUUC-Xma-134154	Xiphophorus maculatus	36.15	2.00e-40	158.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence