iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d023795	Zm00001d023795_T016	Zm00001d023795_T016
Zm00001d023795	Zm00001d023795_T004	Zm00001d023795_T004
Zm00001d023795	Zm00001d023795_T010	Zm00001d023795_T010
Zm00001d023795	Zm00001d023795_T005	Zm00001d023795_T005
Zm00001d023795	Zm00001d023795_T044	Zm00001d023795_T044
Zm00001d023795	Zm00001d023795_T033	Zm00001d023795_T033
Zm00001d023795	Zm00001d023795_T028	Zm00001d023795_T028
Zm00001d023795	Zm00001d023795_T038	Zm00001d023795_T038
Zm00001d023795	Zm00001d023795_T014	Zm00001d023795_T014
Zm00001d023795	Zm00001d023795_T024	Zm00001d023795_T024
Zm00001d023795	Zm00001d023795_T035	Zm00001d023795_T035
Zm00001d023795	Zm00001d023795_T058	Zm00001d023795_T058
Zm00001d023795	Zm00001d023795_T047	Zm00001d023795_T047
Zm00001d023795	Zm00001d023795_T041	Zm00001d023795_T041
Zm00001d023795	Zm00001d023795_T048	Zm00001d023795_T048
Zm00001d023795	Zm00001d023795_T051	Zm00001d023795_T051
Zm00001d023795	Zm00001d023795_T003	Zm00001d023795_T003
Zm00001d023795	Zm00001d023795_T009	Zm00001d023795_T009
Zm00001d023795	Zm00001d023795_T006	Zm00001d023795_T006
Zm00001d023795	Zm00001d023795_T043	Zm00001d023795_T043
Zm00001d023795	Zm00001d023795_T052	Zm00001d023795_T052
Zm00001d023795	Zm00001d023795_T036	Zm00001d023795_T036
Zm00001d023795	Zm00001d023795_T057	Zm00001d023795_T057
Zm00001d023795	Zm00001d023795_T023	Zm00001d023795_T023
Zm00001d023795	Zm00001d023795_T013	Zm00001d023795_T013

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/HECT	1.60e-121	407.8	3302	3641
UBD/Alpha-Helix/UBA	5.70e-07	31.5	1300	1339

Active Site

Position(s)	Description	Evidence
3609	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 activity/HECT

   S: 2    ksdlkkrlevefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknpehlklFeflGrllgkalqdgrlld 89
           ++dlk rl v+f+gEeg+d+gG+tre+++ +s+ + ++++ lf ++ +++ t+qpnp+s ++ +ehl++F+f+Gr++gkal+dg+lld
   Q: 3302 PQDLKGRLTVQFQGEEGIDAGGLTREWYQSISRVIVDKSALLF-TTVGNDLTFQPNPNSVYQ-TEHLSYFKFVGRVVGKALFDGQLLD 3387
           689************************************9999.556678899******986.5************************ PP
   S: 90   lplsksfyklllgkklsledleevdpelykslkeikenaesdieelgldltfsvseei.....lgetkeee..LkpgGenipVtneNk 170
           +++++sfyk++lg+k++++d+e++dp +yk+lk+++en   di++  ldltfs++ ++     ++++++++  L+pgG+ni+Vt+eNk
   Q: 3388 AHFTRSFYKHILGVKVTYHDIEAIDPSYYKNLKWMLEN---DISDV-LDLTFSMDADEeklilYEKAEVTDceLIPGGRNIRVTEENK 3471
           ************************************99...99998.99999977776779996555555455*************** PP
   S: 171  eeYvklvveyrlkegikeqveafreGfneviplellslFteeelellicGeeeidvedlkketkykggytedspaiqwFwevleefss 258
           +eYv++v+e+rl++ i+ q++af eGfne+ip el+s+F+ +elelli+G ++id++dlk +t+y +gy+  sp++qwFwe++++fs+
   Q: 3472 HEYVDRVAEHRLTTAIRPQINAFLEGFNELIPRELISIFNDKELELLISGLPDIDLDDLKTNTEY-SGYSIASPVVQWFWEIVQGFSK 3558
           *****************************************************************.55******************** PP
   S: 259  eerkafLqFvTgssrlPlgGfaelk....prlfvirk.dasddrlPssnTCfnyLkLPeYsskeilkekLlyAieet.kgFel 335
           e++++fLqFvTg+s++Pl+Gf el+    p++f+i+k ++s+++lPs++TCfn+L+LPeY+ske+l+e+Ll+Ai+e+ +gF++
   Q: 3559 EDKARFLQFVTGTSKVPLEGFSELQgisgPQRFQIHKaYGSTNHLPSAHTCFNQLDLPEYTSKEQLQERLLLAIHEAnEGFGF 3641
           *************************************99999***********************************9***85 PP

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLldg 41
           de+++  +veMGF+r +a +aLr+   n++e A+++L+ +
   Q: 1300 DESAISLIVEMGFSRARAEEALRQVgTNSVEIATDWLFAH 1339
           89***********************************976 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAAAAAAMAA HRASFPLRLQ QILAGSRAVS PAIKIESEPP ANIKAFIDRV VNIPLHDIAI 60
PLSGFCWEFN KGNFHHWRPL FIHFDTYFKT YISSRKDLLL SDDMTEADPM PKNAILKILR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCAAACAA CAATCACAGC CCTCTCTCCC TCTCCCCTCC TTTACGTCGC CGCCTCCGAA 60
TCCCCACCTC TTTGCTCCTC CGCCATCCTC CTCCGCGGCC GATGTGTGTG CCCCGCCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR025527--DUF4414
IPR010309--E3_Ub_ligase_DUF908
IPR010314--E3_Ub_ligase_DUF913
IPR000569--HECT_dom
IPR015940--UBA
IPR009060--UBA-like
IPR003903--UIM_dom

PROSITE

PS50237--HECT
PS50030--UBA
PS50330--UIM

Pfam

PF14377--DUF4414
PF06012--DUF908
PF06025--DUF913
PF00632--HECT
PF00627--UBA

SMART

SM00119--HECTc
SM00165--UBA

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001684	Ailuropoda melanoleuca	51.61	9.00e-128	452.00
IUUC-Atr-002582	Amborella trichopoda	57.50	0.00e+00	2113.00
IUUC-Apl-003400	Anas platyrhynchos	43.02	7.00e-99	354.00
IUUC-Aca-005263	Anolis carolinensis	44.40	1.00e-128	456.00
IUUC-Aly-006157	Arabidopsis lyrata	54.95	0.00e+00	2132.00
IUUC-Ago-008005	Ashbya gossypii	40.96	2.00e-128	454.00
IUUC-Acl-008254	Aspergillus clavatus	43.22	1.00e-138	489.00
IUUC-Afl-008712	Aspergillus flavus	43.99	8.00e-140	491.00
IUUC-Afu-009022	Aspergillus fumigatus	43.22	2.00e-138	488.00
IUUC-Ang-009771	Aspergillus niger	43.51	4.00e-141	497.00
IUUC-Aor-010186	Aspergillus oryzae	43.39	9.00e-130	457.00
IUUC-Ate-010253	Aspergillus terreus	43.17	3.00e-139	491.00
IUUC-Ame-011067	Astyanax mexicanus	51.75	8.00e-126	446.00
IUUC-Bgr-012043	Blumeria graminis	32.94	1.00e-145	512.00
IUUC-Bta-012813	Bos taurus	51.61	6.00e-128	453.00
IUUC-Bci-013995	Botrytis cinerea	42.45	7.00e-139	489.00
IUUC-Bdi-014884	Brachypodium distachyon	82.69	0.00e+00	5458.00
IUUC-Cel-018179	Caenorhabditis elegans	47.72	1.00e-121	432.00
IUUC-Cja-018741	Callithrix jacchus	51.72	2.00e-127	451.00
IUUC-Cfa-020083	Canis familiaris	51.61	7.00e-128	453.00
IUUC-Cpo-021766	Cavia porcellus	41.00	2.00e-101	362.00
IUUC-Cre-022900	Chlamydomonas reinhardtii	60.56	4.00e-157	546.00
IUUC-Csa-023853	Chlorocebus sabaeus	51.61	7.00e-128	453.00
IUUC-Cho-024718	Choloepus hoffmanni	53.93	4.00e-117	417.00
IUUC-Cin-025627	Ciona intestinalis	49.43	4.00e-122	434.00
IUUC-Csv-025872	Ciona savignyi	49.66	2.00e-119	421.00
IUUC-Cne-027095	Cryptococcus neoformans	41.65	3.00e-108	387.00
IUUC-Cme-027267	Cyanidioschyzon merolae	53.76	2.00e-129	457.00
IUUC-Dre-028525	Danio rerio	50.64	2.00e-112	402.00
IUUC-Dno-029680	Dasypus novemcinctus	51.61	5.00e-128	453.00
IUUC-Dse-031197	Dothistroma septosporum	33.30	1.00e-134	476.00
IUUC-Dme-032122	Drosophila melanogaster	48.16	1.00e-122	436.00
IUUC-Ete-032966	Echinops telfairi	36.55	3.00e-102	365.00
IUUC-Eca-033915	Equus caballus	51.03	2.00e-125	445.00
IUUC-Eeu-034963	Erinaceus europaeus	51.26	7.00e-126	446.00
IUUC-Fca-035824	Felis catus	51.61	7.00e-128	453.00
IUUC-Fal-036687	Ficedula albicollis	43.05	1.00e-99	357.00
IUUC-Fox-037756	Fusarium oxysporum	32.89	2.00e-155	545.00
IUUC-Gmo-039073	Gadus morhua	51.99	2.00e-127	452.00
IUUC-Gga-040845	Gallus gallus	43.02	3.00e-99	356.00
IUUC-Gac-042430	Gasterosteus aculeatus	51.99	2.00e-127	452.00
IUUC-Gma-043129	Glycine max	58.11	0.00e+00	3832.00
IUUC-Ggo-044465	Gorilla gorilla	41.58	2.00e-99	357.00
IUUC-Hsa-046879	Homo sapiens	51.61	7.00e-128	453.00
IUUC-Hvu-047697	Hordeum vulgare	82.17	0.00e+00	5413.00
IUUC-Itr-048430	Ictidomys tridecemlineatus	51.61	6.00e-128	452.00
IUUC-Lch-050252	Latimeria chalumnae	51.49	1.00e-126	449.00
IUUC-Lpe-051550	Leersia perrieri	81.58	0.00e+00	5294.00
IUUC-Loc-052472	Lepisosteus oculatus	51.38	1.00e-127	452.00
IUUC-Lma-053159	Leptosphaeria maculans	33.47	8.00e-148	519.00
IUUC-Laf-054154	Loxodonta africana	51.61	5.00e-128	454.00
IUUC-Mcc-055085	Macaca mulatta	51.61	9.00e-128	452.00
IUUC-Meu-056436	Macropus eugenii	40.10	2.00e-77	283.00
IUUC-Mor-057201	Magnaporthe oryzae	32.15	3.00e-142	501.00
IUUC-Mpo-057597	Magnaporthe poae	41.58	7.00e-134	473.00
IUUC-Mtr-057633	Medicago truncatula	58.50	0.00e+00	3813.00
IUUC-Mla-058888	Melampsora laricipopulina	46.34	3.00e-114	404.00
IUUC-Mga-059935	Meleagris gallopavo	43.02	2.00e-99	356.00
IUUC-Mvi-060320	Microbotryum violaceum	39.40	5.00e-122	433.00
IUUC-Mmr-060820	Microcebus murinus	51.61	5.00e-128	454.00
IUUC-Mdo-062930	Monodelphis domestica	44.40	3.00e-128	454.00
IUUC-Mmu-063601	Mus musculus	51.61	7.00e-128	453.00
IUUC-Mac-065499	Musa acuminata	66.00	0.00e+00	4226.00
IUUC-Mpu-066653	Mustela putorius furo	51.61	9.00e-128	452.00
IUUC-Mlu-067418	Myotis lucifugus	44.40	4.00e-128	454.00
IUUC-Nfi-068278	Neosartorya fischeri	43.41	2.00e-139	491.00
IUUC-Ncr-068813	Neurospora crassa	44.46	2.00e-144	508.00
IUUC-Nle-069418	Nomascus leucogenys	51.61	7.00e-128	453.00
IUUC-Opr-070585	Ochotona princeps	44.53	4.00e-93	335.00
IUUC-Ont-071300	Oreochromis niloticus	51.99	4.00e-127	451.00
IUUC-Oan-073046	Ornithorhynchus anatinus	51.37	1.00e-126	449.00
IUUC-Ocu-074178	Oryctolagus cuniculus	51.61	4.00e-128	454.00
IUUC-Oba-075757	Oryza barthii	83.20	0.00e+00	5378.00
IUUC-Obr-076553	Oryza brachyantha	82.97	0.00e+00	5444.00
IUUC-Ogl-077520	Oryza glaberrima	83.39	0.00e+00	5514.00
IUUC-Ogu-078278	Oryza glumaepatula	82.45	0.00e+00	5441.00
IUUC-Oin-079767	Oryza indica	82.95	0.00e+00	5476.00
IUUC-Olo-080380	Oryza longistaminata	81.91	0.00e+00	5420.00
IUUC-Ome-081925	Oryza meridionalis	83.22	0.00e+00	5497.00
IUUC-Oni-082619	Oryza nivara	83.28	0.00e+00	5503.00
IUUC-Opu-083684	Oryza punctata	81.47	0.00e+00	5374.00
IUUC-Oru-084501	Oryza rufipogon	83.45	0.00e+00	5518.00
IUUC-Osa-086251	Oryza sativa	88.02	0.00e+00	1390.00
IUUC-Ola-086777	Oryzias latipes	41.86	4.00e-100	358.00
IUUC-Olu-087813	Ostreococcus lucimarinus	50.12	9.00e-122	429.00
IUUC-Oga-088903	Otolemur garnettii	51.61	7.00e-128	453.00
IUUC-Oar-090210	Ovis aries	51.61	8.00e-128	453.00
IUUC-Ptr-090529	Pan troglodytes	40.70	3.00e-101	362.00
IUUC-Pan-092368	Papio anubis	50.50	5.00e-114	407.00
IUUC-Psi-093969	Pelodiscus sinensis	42.83	2.00e-99	356.00
IUUC-Pno-094871	Phaeosphaeria nodorum	33.36	4.00e-144	507.00
IUUC-Pfo-096232	Poecilia formosa	51.99	2.00e-127	452.00
IUUC-Pab-098583	Pongo abelii	51.61	8.00e-128	453.00
IUUC-Pca-100596	Procavia capensis	43.23	1.00e-87	317.00
IUUC-Pva-102116	Pteropus vampyrus	47.82	1.00e-113	406.00
IUUC-Pgr-103465	Puccinia graminis	40.83	1.00e-125	445.00
IUUC-Ptt-103813	Puccinia triticina	41.79	1.00e-116	416.00
IUUC-Pte-104018	Pyrenophora teres	33.59	6.00e-149	523.00
IUUC-Rno-105153	Rattus norvegicus	36.54	6.00e-101	361.00
IUUC-Sce-106449	Saccharomyces cerevisiae	43.10	1.00e-123	439.00
IUUC-Sha-106961	Sarcophilus harrisii	44.58	2.00e-128	455.00
IUUC-Sja-107814	Schizosaccharomyces japonicus	38.20	3.00e-132	467.00
IUUC-Spo-108024	Schizosaccharomyces pombe	42.54	7.00e-135	476.00
IUUC-Sit-110598	Setaria italica	89.26	0.00e+00	5810.00
IUUC-Sar-113291	Sorex araneus	52.14	3.00e-123	437.00
IUUC-Sbi-114042	Sorghum bicolor	92.72	0.00e+00	6134.00
IUUC-Sre-114958	Sporisorium reilianum	47.93	9.00e-142	496.00
IUUC-Ssc-115754	Sus scrofa	51.61	9.00e-128	453.00
IUUC-Tgu-117225	Taeniopygia guttata	43.02	2.00e-99	356.00
IUUC-Tru-118570	Takifugu rubripes	52.22	9.00e-128	452.00
IUUC-Tsy-119407	Tarsius syrichta	46.04	9.00e-95	341.00
IUUC-Tni-120836	Tetraodon nigroviridis	51.52	1.00e-123	439.00
IUUC-Tca-121479	Theobroma cacao	60.31	0.00e+00	3923.00
IUUC-Tre-121909	Trichoderma reesei	32.79	9.00e-151	529.00
IUUC-Tvi-122370	Trichoderma virens	32.87	7.00e-147	516.00
IUUC-Tae-125214	Triticum aestivum	81.95	0.00e+00	2266.00
IUUC-Tme-127172	Tuber melanosporum	41.02	4.00e-135	477.00
IUUC-Tbe-127793	Tupaia belangeri	42.45	2.00e-84	306.00
IUUC-Ttr-129253	Tursiops truncatus	51.61	1.00e-127	452.00
IUUC-Uma-129355	Ustilago maydis	47.04	4.00e-144	504.00
IUUC-Vpa-130708	Vicugna pacos	51.61	2.00e-127	452.00
IUUC-Vvi-131078	Vitis vinifera	58.86	0.00e+00	3777.00
IUUC-Xtr-132123	Xenopus tropicalis	49.32	2.00e-116	415.00
IUUC-Xma-133869	Xiphophorus maculatus	51.99	2.00e-127	452.00
IUUC-Yli-134657	Yarrowia lipolytica	46.90	2.00e-135	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence