iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099955

Ensembl Protein ID

POPTR_0008s02910.1

UniProt Accession

U5G1K4; U5G1K4_POPTR

Genbank Protein ID

ERP57295.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTR_0008s02910g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s02910	POPTR_0008s02910.1	POPTR_0008s02910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-09	36.4	206	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H +++t++af ++ +l+++++  ++ik+WDlr++ +l+
   Q: 206  HPGPITAMAFhPNgNLMATSGKEKKIKIWDLRKFEVLQ 243
           899********777******************998876 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MPSKGGYLEA EGIEKTWRIK QDAINHEVDI SSAKNQYDIV LPDFGPYTLD FTSSGRYMAA 60
AGRKGHLAVV DMKNMSLIKE MQVRETVRDI VFLHNELFFA AAQKKYPYIY NRDGVELHCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAATTGTCTC ACGAGTTGGA TACGAAAGTA AAGAAGTATC TTAGAGGAGA AGGGGCTAAT 60
TTGGAGGTCA GAAATTGGTG TCCAACATTT CCAGTCGAAA TACTTTTATT TCTTTGGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR012952--BING4_C_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08149--BING4CT
PF00400--WD40

SMART

SM01033--BING4CT
SM00320--WD40

Gene Ontology

GO:0030686--C:90S preribosome
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pop:POPTR_0008s02910g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Eeu-034982	Erinaceus europaeus	45.69	1.00e-50	193.00
IUUC-Gmo-039548	Gadus morhua	43.63	3.00e-88	318.00
IUUC-Gac-042249	Gasterosteus aculeatus	43.43	6.00e-91	327.00
IUUC-Meu-056419	Macropus eugenii	45.20	3.00e-78	285.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence