iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d021314	Zm00001d021314_T001	Zm00001d021314_T001
Zm00001d021314	Zm00001d021314_T003	Zm00001d021314_T003
Zm00001d021314	Zm00001d021314_T005	Zm00001d021314_T005
Zm00001d021314	Zm00001d021314_T009	Zm00001d021314_T009
Zm00001d021314	Zm00001d021314_T007	Zm00001d021314_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.40e-06	28.6	270	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++++g  ++ lpC+H++h +C+++w       + +  CP C
   Q: 270  CVICRVELEEGesLIALPCKHLYHPECINQW------LQINKVCPMC 310
           ****999977666999***************......********** PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDGSKGSVGG GDGTGPEKPS ADSNPSLDPP QPTAAAVEAT DDGAAAAAAE AARRPFTALS 60
QEEADLALAR VLQEQERAYM LLRMNGGGGE GSDYGSSDEG SYEYDEEGEE DYEEELEHRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCCGGGGG CCTTTAACTC GAGTCGCTAA TCCGTTTCCT TGTATCGCCC CGTCTCCGAC 60
CTCGCTCGCC GCCATGGATG GTTCGAAGGG GAGCGTAGGT GGCGGGGACG GGACCGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002551	Amborella trichopoda	64.94	7.00e-55	206.00
IUUC-Apl-003783	Anas platyrhynchos	37.50	7.00e-15	73.90
IUUC-Aly-005825	Arabidopsis lyrata	64.90	2.00e-49	188.00
IUUC-Ath-007389	Arabidopsis thaliana	65.56	2.00e-49	189.00
IUUC-Bdi-014786	Brachypodium distachyon	85.03	4.00e-63	234.00
IUUC-Bol-015622	Brassica oleracea	61.44	4.00e-48	184.00
IUUC-Gga-040277	Gallus gallus	37.50	3.00e-15	75.10
IUUC-Gma-043972	Glycine max	64.33	9.00e-49	186.00
IUUC-Hvu-047849	Hordeum vulgare	83.59	3.00e-60	224.00
IUUC-Itr-048602	Ictidomys tridecemlineatus	31.43	2.00e-15	75.90
IUUC-Lpe-051230	Leersia perrieri	75.69	1.00e-57	216.00
IUUC-Mtr-058625	Medicago truncatula	64.46	3.00e-43	168.00
IUUC-Mga-059245	Meleagris gallopavo	36.27	1.00e-14	72.00
IUUC-Mac-065545	Musa acuminata	70.92	2.00e-58	218.00
IUUC-Obr-076047	Oryza brachyantha	81.94	7.00e-68	249.00
IUUC-Ogl-077938	Oryza glaberrima	84.72	1.00e-67	249.00
IUUC-Ogu-078317	Oryza glumaepatula	67.44	8.00e-61	226.00
IUUC-Oin-080031	Oryza indica	84.03	5.00e-67	247.00
IUUC-Olo-080905	Oryza longistaminata	74.22	2.00e-48	187.00
IUUC-Oni-082691	Oryza nivara	75.00	9.00e-56	209.00
IUUC-Osa-085452	Oryza sativa	84.03	5.00e-67	247.00
IUUC-Psi-092966	Pelodiscus sinensis	36.54	1.00e-14	73.20
IUUC-Pop-098888	Populus trichocarpa	62.34	2.00e-54	205.00
IUUC-Ppe-102055	Prunus persica	69.43	1.00e-61	229.00
IUUC-Pgr-103448	Puccinia graminis	41.03	8.00e-11	59.70
IUUC-Smo-108692	Selaginella moellendorffii	60.87	2.00e-29	119.00
IUUC-Sit-109831	Setaria italica	92.90	2.00e-84	305.00
IUUC-Sbi-114295	Sorghum bicolor	96.75	2.00e-86	311.00
IUUC-Tru-118054	Takifugu rubripes	36.94	6.00e-14	72.80
IUUC-Tca-121858	Theobroma cacao	69.03	2.00e-52	199.00
IUUC-Tae-123101	Triticum aestivum	84.35	2.00e-70	259.00
IUUC-Tur-126249	Triticum urartu	72.22	1.00e-63	235.00
IUUC-Vvi-131462	Vitis vinifera	65.58	6.00e-57	213.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence