iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091552

Ensembl Protein ID

ENSPTRP00000046606.4

UniProt Accession

H2R452; H2R452_PANTR

Genbank Protein ID

JAA25860.1

Protein Name

Polymerase (DNA directed) kappa

Genbank Nucleotide ID

AACZ03041065

Gene Name

POLK

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000016997.5	ENSPTRT00000045956.4	ENSPTRP00000046606.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	3.00e-14	52.8	778	803

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvC...qkmvdqtdfeeHlDeCl 24
           lvCPvC   qk+ d+t+f+ H+D Cl
   Q: 778  LVCPVCnveQKTSDLTLFNVHVDVCL 803
           89****999999*************8 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MDSTKEKCDS YKDDLLLRMG LNDNKAGMEG LDKEKINKII MEATKGSRFY GNELKKEKQV 60
NQRIENMMQQ KAQITSQQLR KAQLQVDRFA MELEQSRNLS NTIVHIDMDA FYAAVEMRDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCTGTGCTG CATTCTGGGA AGGGCGTTGG TCCGTCGCTC GCGCAGCCTC CTGGGAGTTG 60
TAGTCGCGAT CCTGAGGTAA CGGGTGAGTA TCCCGCGCGG GGATCGCTTG TCCCCTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017961--DNA_pol_Y-fam_little_finger
IPR022880--DNApol_IV
IPR024728--PolY_HhH_motif
IPR001126--UmuC
IPR006642--Znf_Rad18_put

PROSITE

PS50173--UMUC

Pfam

PF00817--IMS
PF11799--IMS_C
PF11798--IMS_HHH

SMART

SM00734--ZnF_Rad18

Gene Ontology

GO:0016604--C:nuclear body
GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0006297--P:nucleotide-excision repair, DNA gap filling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001908	Ailuropoda melanoleuca	84.44	0.00e+00	1465.00
IUUC-Apl-003228	Anas platyrhynchos	57.38	0.00e+00	849.00
IUUC-Aca-005080	Anolis carolinensis	57.23	0.00e+00	870.00
IUUC-Afl-008688	Aspergillus flavus	30.05	1.00e-36	147.00
IUUC-Afu-008792	Aspergillus fumigatus	33.15	3.00e-51	196.00
IUUC-Aor-010225	Aspergillus oryzae	43.72	1.00e-43	171.00
IUUC-Ame-011889	Astyanax mexicanus	59.44	0.00e+00	698.00
IUUC-Bta-013127	Bos taurus	83.49	0.00e+00	1455.00
IUUC-Bra-017144	Brassica rapa	55.61	1.00e-59	224.00
IUUC-Cel-018629	Caenorhabditis elegans	43.05	3.00e-101	362.00
IUUC-Cja-019598	Callithrix jacchus	90.39	0.00e+00	1523.00
IUUC-Cfa-020661	Canis familiaris	83.64	0.00e+00	1442.00
IUUC-Cpo-022040	Cavia porcellus	75.00	0.00e+00	1229.00
IUUC-Csa-023669	Chlorocebus sabaeus	94.31	0.00e+00	1609.00
IUUC-Cho-024910	Choloepus hoffmanni	69.18	0.00e+00	709.00
IUUC-Csv-026293	Ciona savignyi	51.09	5.00e-136	477.00
IUUC-Dre-028317	Danio rerio	57.46	0.00e+00	715.00
IUUC-Dno-029973	Dasypus novemcinctus	82.95	0.00e+00	1401.00
IUUC-Dor-030667	Dipodomys ordii	80.39	0.00e+00	1402.00
IUUC-Dse-031339	Dothistroma septosporum	47.78	6.00e-50	192.00
IUUC-Ete-033030	Echinops telfairi	77.29	0.00e+00	1316.00
IUUC-Eca-033959	Equus caballus	84.40	0.00e+00	1481.00
IUUC-Fca-036160	Felis catus	80.78	0.00e+00	1397.00
IUUC-Fal-037116	Ficedula albicollis	58.89	0.00e+00	866.00
IUUC-Gmo-039003	Gadus morhua	50.31	0.00e+00	712.00
IUUC-Gga-040431	Gallus gallus	66.62	0.00e+00	831.00
IUUC-Gac-042455	Gasterosteus aculeatus	57.70	0.00e+00	704.00
IUUC-Gma-043303	Glycine max	54.35	1.00e-56	214.00
IUUC-Ggo-045024	Gorilla gorilla	98.28	0.00e+00	1709.00
IUUC-Hsa-046294	Homo sapiens	99.08	0.00e+00	1746.00
IUUC-Itr-048670	Ictidomys tridecemlineatus	80.96	0.00e+00	1360.00
IUUC-Lch-050251	Latimeria chalumnae	51.56	0.00e+00	793.00
IUUC-Loc-051939	Lepisosteus oculatus	59.12	0.00e+00	723.00
IUUC-Laf-054562	Loxodonta africana	76.97	0.00e+00	1312.00
IUUC-Mcc-055653	Macaca mulatta	94.60	0.00e+00	1666.00
IUUC-Meu-055994	Macropus eugenii	76.54	6.00e-148	518.00
IUUC-Mga-059228	Meleagris gallopavo	46.07	0.00e+00	637.00
IUUC-Mvi-060383	Microbotryum violaceum	34.34	2.00e-39	157.00
IUUC-Mmr-061202	Microcebus murinus	87.39	0.00e+00	1523.00
IUUC-Mdo-062829	Monodelphis domestica	67.89	0.00e+00	1078.00
IUUC-Mmu-063675	Mus musculus	75.69	0.00e+00	1319.00
IUUC-Mpu-066825	Mustela putorius furo	82.59	0.00e+00	1412.00
IUUC-Mlu-067316	Myotis lucifugus	85.55	0.00e+00	1475.00
IUUC-Nle-069272	Nomascus leucogenys	96.56	0.00e+00	1678.00
IUUC-Opr-070616	Ochotona princeps	71.10	0.00e+00	1221.00
IUUC-Ont-072011	Oreochromis niloticus	63.88	0.00e+00	680.00
IUUC-Oan-073343	Ornithorhynchus anatinus	65.46	0.00e+00	1058.00
IUUC-Ocu-073766	Oryctolagus cuniculus	72.88	0.00e+00	1141.00
IUUC-Ogl-077190	Oryza glaberrima	49.59	3.00e-52	199.00
IUUC-Ogu-078415	Oryza glumaepatula	53.85	2.00e-56	213.00
IUUC-Ome-081300	Oryza meridionalis	62.96	2.00e-24	105.00
IUUC-Osa-085963	Oryza sativa	49.59	3.00e-52	199.00
IUUC-Ola-087034	Oryzias latipes	49.94	0.00e+00	705.00
IUUC-Oga-088157	Otolemur garnettii	81.49	0.00e+00	1410.00
IUUC-Oar-089218	Ovis aries	82.84	0.00e+00	1476.00
IUUC-Pan-092646	Papio anubis	94.50	0.00e+00	1644.00
IUUC-Psi-093608	Pelodiscus sinensis	58.99	0.00e+00	927.00
IUUC-Pma-094381	Petromyzon marinus	49.00	0.00e+00	704.00
IUUC-Pno-095081	Phaeosphaeria nodorum	39.04	8.00e-45	174.00
IUUC-Pfo-096545	Poecilia formosa	59.32	0.00e+00	741.00
IUUC-Pab-097613	Pongo abelii	90.85	0.00e+00	1638.00
IUUC-Pca-101071	Procavia capensis	61.99	2.00e-144	505.00
IUUC-Pva-102252	Pteropus vampyrus	84.94	0.00e+00	1485.00
IUUC-Pgr-103567	Puccinia graminis	36.61	3.00e-43	169.00
IUUC-Ptt-103934	Puccinia triticina	31.54	1.00e-28	121.00
IUUC-Rno-105793	Rattus norvegicus	72.48	0.00e+00	1203.00
IUUC-Sha-107230	Sarcophilus harrisii	69.07	0.00e+00	1140.00
IUUC-Spo-108028	Schizosaccharomyces pombe	31.41	4.00e-53	202.00
IUUC-Sly-111390	Solanum lycopersicum	55.68	7.00e-60	225.00
IUUC-Stu-112284	Solanum tuberosum	54.97	2.00e-60	226.00
IUUC-Sar-113594	Sorex araneus	71.44	0.00e+00	1202.00
IUUC-Sre-115078	Sporisorium reilianum	30.60	7.00e-46	178.00
IUUC-Ssc-116013	Sus scrofa	83.12	0.00e+00	1486.00
IUUC-Tgu-117442	Taeniopygia guttata	57.16	0.00e+00	852.00
IUUC-Tru-117935	Takifugu rubripes	56.32	0.00e+00	673.00
IUUC-Tsy-119489	Tarsius syrichta	73.18	0.00e+00	776.00
IUUC-Tni-120543	Tetraodon nigroviridis	64.37	0.00e+00	650.00
IUUC-Tbe-128112	Tupaia belangeri	82.08	0.00e+00	869.00
IUUC-Ttr-128371	Tursiops truncatus	79.01	0.00e+00	1353.00
IUUC-Uma-129377	Ustilago maydis	32.08	8.00e-46	178.00
IUUC-Vpa-130243	Vicugna pacos	85.67	0.00e+00	1512.00
IUUC-Xtr-132453	Xenopus tropicalis	54.78	0.00e+00	798.00
IUUC-Xma-133255	Xiphophorus maculatus	57.85	0.00e+00	733.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence