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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105805
Ensembl Protein ID ENSRNOP00000005872.1
UniProt Accession P62982; P02248; P02249; P02250; P49664; P62989; Q29120; Q63446; Q91887; Q91888; Q9D2W3; RS27A_RAT
Genbank Protein ID CAA57432.1
Protein Name Ubiquitin-40S ribosomal protein S27a; Ubiquitin carboxyl extension protein 80; Ubiquitin; 40S ribosomal protein S27a
Genbank Nucleotide ID X81839
Gene Name Rps27a; Uba80; Ubcep1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000004426.3 ENSRNOT00000005872.3 ENSRNOP00000005872.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
PINAMentha
Post-translational Modifications (PTMs)
CPLMPhosphositePlusdbPTM
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UBL/NEDD8 4.00e-41 139.6 1 76
ULD/UDP/UBQ/UBQ_PIM 1.70e-29 102.0 1 73
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UBL/NEDD8
   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k+++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
           89*************************************************************************9 PP
   

   ULD/UDP/UBQ/UBQ_PIM
   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K+ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 1    MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73
           99********************************************************************986 PP
   
Organism Rattus norvegicus
Functional Description
(View)

Functional Description


     Ribosomal protein S27a is part of the 40S ribosomal subunit.
 Ribosomal protein S27a is part of the 40S ribosomal subunit.
Protein Sequence
(Fasta)
MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN 60
IQKESTLHLV LRLRGGAKKR KKKSYTTPKK NKHKRKKVKL AVLKYYKVDE NGKISRLRRE 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105805|ULD,NEDD8;ULD,UBQ_PIM|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCAGATTT TTGTGAAGAC CCTTACAGGG AAGACCATCA CGCTCGAGGT ACGGCCAGGT 60
GGCATTGAGG AAGCCAAGGC CTGACTGAGG CCCTGTGTAA TAGAGAACGC GTTTCTGAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105805|ULD,NEDD8;ULD,UBQ_PIM|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0903--Direct protein sequencing
KW-1017--Isopeptide bond
KW-0479--Metal-binding
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein
KW-0832--Ubl conjugation
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR002906--Ribosomal_S27a
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
Pfam

PF01599--Ribosomal_S27
PF00240--ubiquitin
PRINTS

PR00348--UBIQUITIN
SMART

SM01402--Ribosomal_S27
SM00213--UBQ
Gene Ontology

GO:0022627--C:cytosolic small ribosomal subunit
GO:0005634--C:nucleus
GO:0046872--F:metal ion binding
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation
KEGG rno:100912032
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001873 Ailuropoda melanoleuca 99.36 7.00e-68 248.00
IUUC-Atr-003143 Amborella trichopoda 83.55 6.00e-61 226.00
IUUC-Apl-003364 Anas platyrhynchos 89.10 2.00e-59 221.00
IUUC-Aca-005055 Anolis carolinensis 98.08 1.00e-73 268.00
IUUC-Aly-005675 Arabidopsis lyrata 84.87 2.00e-61 228.00
IUUC-Ath-006984 Arabidopsis thaliana 84.87 2.00e-61 228.00
IUUC-Ago-007733 Ashbya gossypii 81.08 7.00e-53 199.00
IUUC-Acl-008099 Aspergillus clavatus 85.53 6.00e-55 206.00
IUUC-Afl-008474 Aspergillus flavus 85.53 8.00e-55 205.00
IUUC-Afu-009021 Aspergillus fumigatus 86.18 2.00e-60 224.00
IUUC-Ani-009265 Aspergillus nidulans 85.53 2.00e-54 204.00
IUUC-Ang-009629 Aspergillus niger 84.87 7.00e-55 206.00
IUUC-Aor-009936 Aspergillus oryzae 85.53 8.00e-55 205.00
IUUC-Ate-010436 Aspergillus terreus 85.53 7.00e-55 206.00
IUUC-Ame-011421 Astyanax mexicanus 98.08 6.00e-67 246.00
IUUC-Bgr-011984 Blumeria graminis 86.09 7.00e-60 222.00
IUUC-Bta-012585 Bos taurus 99.36 7.00e-68 248.00
IUUC-Bci-013920 Botrytis cinerea 86.09 9.00e-55 205.00
IUUC-Bdi-014571 Brachypodium distachyon 84.31 2.00e-55 207.00
IUUC-Bol-016477 Brassica oleracea 83.33 8.00e-62 228.00
IUUC-Cja-019661 Callithrix jacchus 98.72 2.00e-66 244.00
IUUC-Cfa-020795 Canis familiaris 99.36 7.00e-68 248.00
IUUC-Cpo-021905 Cavia porcellus 98.10 2.00e-66 244.00
IUUC-Csa-023120 Chlorocebus sabaeus 99.36 7.00e-68 248.00
IUUC-Cin-025785 Ciona intestinalis 89.10 2.00e-59 220.00
IUUC-Csv-026028 Ciona savignyi 80.52 1.00e-51 195.00
IUUC-Cgl-026423 Colletotrichum gloeosporioides 79.22 2.00e-49 188.00
IUUC-Dre-028206 Danio rerio 98.08 6.00e-67 246.00
IUUC-Dno-029073 Dasypus novemcinctus 99.36 7.00e-68 249.00
IUUC-Dor-030658 Dipodomys ordii 100.00 8.00e-41 158.00
IUUC-Dse-031483 Dothistroma septosporum 83.23 7.00e-59 219.00
IUUC-Dme-032068 Drosophila melanogaster 90.38 8.00e-59 219.00
IUUC-Ete-032297 Echinops telfairi 69.87 2.00e-57 214.00
IUUC-Eca-034346 Equus caballus 99.36 4.00e-68 249.00
IUUC-Eeu-035081 Erinaceus europaeus 85.98 5.00e-37 145.00
IUUC-Fca-035555 Felis catus 99.36 7.00e-68 248.00
IUUC-Fal-037049 Ficedula albicollis 98.72 2.00e-67 247.00
IUUC-Fox-037994 Fusarium oxysporum 86.93 2.00e-60 224.00
IUUC-Fso-038121 Fusarium solani 87.50 9.00e-62 228.00
IUUC-Gmo-039231 Gadus morhua 98.08 1.00e-66 245.00
IUUC-Ggr-039996 Gaeumannomyces graminis 83.77 7.00e-55 205.00
IUUC-Gga-040938 Gallus gallus 98.72 2.00e-67 247.00
IUUC-Gac-041956 Gasterosteus aculeatus 98.08 5.00e-67 246.00
IUUC-Gma-043007 Glycine max 83.77 2.00e-62 231.00
IUUC-Ggo-044980 Gorilla gorilla 99.36 7.00e-68 248.00
IUUC-Hsa-046329 Homo sapiens 99.36 7.00e-68 248.00
IUUC-Itr-047994 Ictidomys tridecemlineatus 99.36 7.00e-68 248.00
IUUC-Kpa-049159 Komagataella pastoris 81.58 1.00e-55 207.00
IUUC-Lch-050032 Latimeria chalumnae 97.44 3.00e-66 243.00
IUUC-Loc-052020 Lepisosteus oculatus 98.08 1.00e-66 245.00
IUUC-Lma-053163 Leptosphaeria maculans 84.42 9.00e-60 222.00
IUUC-Laf-054502 Loxodonta africana 96.53 4.00e-57 213.00
IUUC-Mcc-055895 Macaca mulatta 99.36 7.00e-68 248.00
IUUC-Meu-056529 Macropus eugenii 99.36 7.00e-68 248.00
IUUC-Mor-056959 Magnaporthe oryzae 83.77 7.00e-55 205.00
IUUC-Mpo-057436 Magnaporthe poae 83.77 7.00e-55 205.00
IUUC-Mtr-058743 Medicago truncatula 83.77 7.00e-63 232.00
IUUC-Mla-058871 Melampsora laricipopulina 85.43 2.00e-60 224.00
IUUC-Mga-059211 Meleagris gallopavo 94.52 4.00e-58 216.00
IUUC-Mvi-060484 Microbotryum violaceum 82.58 1.00e-58 218.00
IUUC-Mmr-060710 Microcebus murinus 98.72 4.00e-74 270.00
IUUC-Mdo-062150 Monodelphis domestica 98.10 9.00e-67 245.00
IUUC-Mmu-064336 Mus musculus 100.00 2.00e-68 250.00
IUUC-Mac-064616 Musa acuminata 83.23 4.00e-61 226.00
IUUC-Mpu-066613 Mustela putorius furo 99.36 7.00e-68 248.00
IUUC-Mlu-067676 Myotis lucifugus 99.36 7.00e-68 248.00
IUUC-Nfi-068350 Neosartorya fischeri 86.18 2.00e-60 224.00
IUUC-Ncr-068635 Neurospora crassa 85.53 5.00e-55 206.00
IUUC-Nle-069607 Nomascus leucogenys 96.15 4.00e-65 239.00
IUUC-Opr-070523 Ochotona princeps 98.06 9.00e-65 238.00
IUUC-Ont-071636 Oreochromis niloticus 98.08 7.00e-67 245.00
IUUC-Oan-073638 Ornithorhynchus anatinus 99.36 1.00e-67 248.00
IUUC-Ocu-074497 Oryctolagus cuniculus 99.36 7.00e-68 248.00
IUUC-Oba-075488 Oryza barthii 84.31 2.00e-55 207.00
IUUC-Obr-076443 Oryza brachyantha 84.31 2.00e-55 207.00
IUUC-Ogl-077000 Oryza glaberrima 84.31 2.00e-55 207.00
IUUC-Oin-080161 Oryza indica 84.31 2.00e-55 207.00
IUUC-Ome-081322 Oryza meridionalis 84.31 2.00e-55 207.00
IUUC-Oru-085032 Oryza rufipogon 84.31 2.00e-55 207.00
IUUC-Osa-085398 Oryza sativa 84.31 2.00e-55 207.00
IUUC-Ola-086383 Oryzias latipes 97.44 5.00e-66 242.00
IUUC-Olu-087619 Ostreococcus lucimarinus 80.67 7.00e-46 175.00
IUUC-Oga-089160 Otolemur garnettii 94.23 3.00e-68 250.00
IUUC-Oar-090107 Ovis aries 99.36 8.00e-68 249.00
IUUC-Ptr-090693 Pan troglodytes 99.36 7.00e-68 248.00
IUUC-Pan-092065 Papio anubis 99.36 7.00e-68 248.00
IUUC-Psi-093901 Pelodiscus sinensis 98.57 5.00e-58 216.00
IUUC-Pma-094647 Petromyzon marinus 92.62 3.00e-42 163.00
IUUC-Ppa-095915 Physcomitrella patens 83.12 9.00e-62 228.00
IUUC-Pfo-097442 Poecilia formosa 98.08 6.00e-67 246.00
IUUC-Pab-098246 Pongo abelii 94.23 5.00e-65 239.00
IUUC-Pop-099335 Populus trichocarpa 84.31 4.00e-62 229.00
IUUC-Ppe-101784 Prunus persica 84.31 4.00e-62 229.00
IUUC-Pva-102665 Pteropus vampyrus 97.35 5.00e-62 229.00
IUUC-Pgr-103596 Puccinia graminis 84.11 1.00e-55 208.00
IUUC-Ptt-103852 Puccinia triticina 66.67 3.00e-46 178.00
IUUC-Pte-104221 Pyrenophora teres 85.06 4.00e-60 223.00
IUUC-Pyt-104464 Pyrenophora triticirepentis 83.77 7.00e-59 219.00
IUUC-Sce-106232 Saccharomyces cerevisiae 82.12 2.00e-53 200.00
IUUC-Sha-106772 Sarcophilus harrisii 99.36 9.00e-68 248.00
IUUC-Sja-107885 Schizosaccharomyces japonicus 85.71 2.00e-56 210.00
IUUC-Spo-108212 Schizosaccharomyces pombe 82.99 3.00e-48 183.00
IUUC-Ssl-108492 Sclerotinia sclerotiorum 86.09 9.00e-55 205.00
IUUC-Sit-110054 Setaria italica 84.31 2.00e-61 227.00
IUUC-Sly-111074 Solanum lycopersicum 84.31 2.00e-61 227.00
IUUC-Stu-112439 Solanum tuberosum 84.97 1.00e-62 231.00
IUUC-Sbi-113920 Sorghum bicolor 84.97 8.00e-62 228.00
IUUC-Sre-114920 Sporisorium reilianum 84.67 2.00e-56 210.00
IUUC-Ssc-115514 Sus scrofa 99.36 7.00e-68 248.00
IUUC-Tgu-116890 Taeniopygia guttata 98.09 4.00e-66 243.00
IUUC-Tru-118475 Takifugu rubripes 98.08 1.00e-66 245.00
IUUC-Tsy-119447 Tarsius syrichta 98.72 2.00e-67 247.00
IUUC-Tni-119751 Tetraodon nigroviridis 96.43 2.00e-56 210.00
IUUC-Tca-121126 Theobroma cacao 84.31 4.00e-62 229.00
IUUC-Tre-122027 Trichoderma reesei 86.18 3.00e-60 223.00
IUUC-Tvi-122659 Trichoderma virens 86.18 3.00e-60 223.00
IUUC-Tae-124683 Triticum aestivum 84.31 2.00e-55 207.00
IUUC-Tme-126994 Tuber melanosporum 85.43 7.00e-54 202.00
IUUC-Ttr-128453 Tursiops truncatus 99.36 7.00e-68 248.00
IUUC-Uma-129571 Ustilago maydis 84.00 6.00e-56 209.00
IUUC-Vda-129762 Verticillium dahliae 85.53 3.00e-55 206.00
IUUC-Vpa-130119 Vicugna pacos 80.77 2.00e-46 177.00
IUUC-Vvi-131376 Vitis vinifera 84.31 2.00e-62 231.00
IUUC-Xtr-131977 Xenopus tropicalis 91.03 3.00e-59 220.00
IUUC-Xma-133747 Xiphophorus maculatus 97.54 6.00e-47 179.00
IUUC-Yli-134406 Yarrowia lipolytica 84.35 8.00e-47 179.00
Created Date 25-Jun-2017

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