iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095841

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544953

Gene Name

PHYPADRAFT_183278

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S64_187V6	PP1S64_187V6.1	PP1S64_187V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-28	96.5	264	294
E3 activity/RING/U-box	6.40e-12	46.1	2	68
UBD/Beta-Prp	1.10e-50	173.3	224	433

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gHt +vt+++f   d ++++Gs D+t+k+W 
   Q: 264  GHTKRVTSVKFvaKDEYVLTGSIDKTVKIWQ 294
           8***********988***************6 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            C+Is+  ++dPvv+  sG  ++r+ I k++a++g+ +Pvt++ l+ edl+  +t +++  + +++ s
   Q: 2    FCSISGVTPEDPVVSRkSGLLFERRLILKHIADNGT-DPVTGEVLSAEDLISIKTNKAVKPRPLQAAS 68
           6**************99******************9.**********************999988766 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlsls 101
           k  i ++++++ k+l+++g+ dgt +v++ ++g l+++lsgh++ vt+vkf  ++++ +tgs D+t+k+w  +   ++ c  tlk h+++v++++
   Q: 224  KPGIMSIDIHQTKNLVLSGGVDGTAIVFNRSSGELVSTLSGHTKRVTSVKFVAKDEYVLTGSIDKTVKIWQGQedgDYACKCTLKDHSAEVRAVT 318
           44466788888899999999999999999999999999999999999999988888999999999999995555668888888899999999999 PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsgh.dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkel 195
           ++++++++v++s+d+t + +dl+tg cl +++++  ++  +++++hpdg +l +G++ + vr+Wd+k++  + +++g ht++v+ +sf++ng +l
   Q: 319  VHATQNYFVTASADKTWNFYDLSTGICLTQVNEPSlQDGYTSASFHPDGLILGTGTAESLVRIWDVKSQANVAKFEG-HTGPVTDISFSENGYFL 412
           99988999999999999999999999998866555144578888999889999999999999999999999999988.99999999999998888 PP
   S: 196  vsgsldgtvklwdlqtgecvrt 217
           +++++dg vklwdl++ +  r+
   Q: 413  ATAGQDG-VKLWDLRKLKNFRS 433
           8888887.79999886655554 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MFCSISGVTP EDPVVSRKSG LLFERRLILK HIADNGTDPV TGEVLSAEDL ISIKTNKAVK 60
PRPLQAASIP GMLGLFQNEW DAVVLSNYAL EQQLHTARQE LSHALYQHDA ACRVIARLKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGAGAGAG AGGCTTTGGC TTCAGAAACC CTAGAATCCC CATTAGAAGG GCTTCTTTCA 60
CCATCGCCCC GAGCTTCTCC TCTCGCTGGC GATGGCGATG CTCGGTCTCC TTTCTCGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0000974--C:Prp19 complex
GO:0071006--C:U2-type catalytic step 1 spliceosome
GO:0004842--F:ubiquitin-protein transferase activity
GO:0000349--P:generation of catalytic spliceosome for first transesterification step

KEGG

ppp:PHYPADRAFT_183278

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001230	Ailuropoda melanoleuca	43.38	2.00e-110	392.00
IUUC-Apl-003686	Anas platyrhynchos	42.63	4.00e-86	311.00
IUUC-Aca-005272	Anolis carolinensis	45.56	6.00e-118	417.00
IUUC-Ago-007879	Ashbya gossypii	25.35	2.00e-29	122.00
IUUC-Acl-008335	Aspergillus clavatus	36.30	9.00e-66	243.00
IUUC-Afl-008527	Aspergillus flavus	36.17	2.00e-68	251.00
IUUC-Afu-008957	Aspergillus fumigatus	34.99	3.00e-76	278.00
IUUC-Ani-009280	Aspergillus nidulans	35.82	1.00e-67	249.00
IUUC-Aor-009905	Aspergillus oryzae	35.97	9.00e-73	266.00
IUUC-Ame-011561	Astyanax mexicanus	46.54	1.00e-45	176.00
IUUC-Bgr-012283	Blumeria graminis	31.30	2.00e-53	202.00
IUUC-Bta-013242	Bos taurus	44.81	2.00e-117	415.00
IUUC-Bci-013901	Botrytis cinerea	34.87	4.00e-71	261.00
IUUC-Cel-018271	Caenorhabditis elegans	40.08	2.00e-104	371.00
IUUC-Cja-019879	Callithrix jacchus	44.34	5.00e-115	407.00
IUUC-Cfa-020175	Canis familiaris	44.81	1.00e-117	415.00
IUUC-Cpo-022379	Cavia porcellus	45.00	1.00e-117	416.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	45.79	1.00e-127	449.00
IUUC-Csa-023500	Chlorocebus sabaeus	44.62	5.00e-117	414.00
IUUC-Cho-025065	Choloepus hoffmanni	39.80	4.00e-46	177.00
IUUC-Cin-025699	Ciona intestinalis	45.68	3.00e-104	371.00
IUUC-Csv-026128	Ciona savignyi	44.83	8.00e-116	409.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	32.11	1.00e-66	246.00
IUUC-Cne-026860	Cryptococcus neoformans	37.24	2.00e-94	338.00
IUUC-Dre-028187	Danio rerio	45.37	1.00e-114	406.00
IUUC-Dno-029453	Dasypus novemcinctus	44.62	7.00e-117	413.00
IUUC-Dor-030150	Dipodomys ordii	41.83	2.00e-39	155.00
IUUC-Dme-031906	Drosophila melanogaster	44.53	3.00e-112	398.00
IUUC-Eca-033478	Equus caballus	44.81	3.00e-117	414.00
IUUC-Eeu-034974	Erinaceus europaeus	43.32	2.00e-75	275.00
IUUC-Fca-036194	Felis catus	44.42	2.00e-116	412.00
IUUC-Fal-037417	Ficedula albicollis	45.58	1.00e-118	419.00
IUUC-Fso-038256	Fusarium solani	32.50	3.00e-67	248.00
IUUC-Gmo-038713	Gadus morhua	46.24	2.00e-117	415.00
IUUC-Ggr-039854	Gaeumannomyces graminis	32.64	3.00e-56	212.00
IUUC-Gga-041143	Gallus gallus	45.58	4.00e-118	417.00
IUUC-Gac-042129	Gasterosteus aculeatus	45.58	1.00e-118	419.00
IUUC-Ggo-045262	Gorilla gorilla	44.62	5.00e-117	414.00
IUUC-Hsa-046036	Homo sapiens	44.62	5.00e-117	414.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.21	1.00e-114	405.00
IUUC-Kpa-049195	Komagataella pastoris	47.69	8.00e-24	103.00
IUUC-Lch-050105	Latimeria chalumnae	44.23	3.00e-114	404.00
IUUC-Loc-052042	Lepisosteus oculatus	40.41	3.00e-85	308.00
IUUC-Lma-053143	Leptosphaeria maculans	36.88	3.00e-73	269.00
IUUC-Laf-053451	Loxodonta africana	43.02	4.00e-113	400.00
IUUC-Mcc-055786	Macaca mulatta	44.62	5.00e-117	414.00
IUUC-Meu-056161	Macropus eugenii	41.38	6.00e-49	187.00
IUUC-Mor-057215	Magnaporthe oryzae	32.25	2.00e-58	219.00
IUUC-Mpo-057419	Magnaporthe poae	31.35	7.00e-52	197.00
IUUC-Mla-059085	Melampsora laricipopulina	37.13	1.00e-86	313.00
IUUC-Mga-060158	Meleagris gallopavo	45.55	4.00e-106	377.00
IUUC-Mvi-060441	Microbotryum violaceum	34.33	3.00e-73	268.00
IUUC-Mmr-061085	Microcebus murinus	44.62	5.00e-117	414.00
IUUC-Mdo-061804	Monodelphis domestica	44.42	1.00e-116	412.00
IUUC-Mmu-063608	Mus musculus	43.04	2.00e-113	402.00
IUUC-Mac-064754	Musa acuminata	70.11	0.00e+00	733.00
IUUC-Mpu-065700	Mustela putorius furo	44.81	2.00e-117	415.00
IUUC-Mlu-068223	Myotis lucifugus	42.99	3.00e-113	401.00
IUUC-Nfi-068504	Neosartorya fischeri	36.67	4.00e-75	274.00
IUUC-Ncr-068729	Neurospora crassa	34.45	9.00e-60	223.00
IUUC-Nle-069754	Nomascus leucogenys	44.62	5.00e-117	414.00
IUUC-Opr-070621	Ochotona princeps	45.44	4.00e-110	390.00
IUUC-Ont-071377	Oreochromis niloticus	46.05	4.00e-116	410.00
IUUC-Oan-073498	Ornithorhynchus anatinus	33.33	7.00e-37	146.00
IUUC-Ocu-074182	Oryctolagus cuniculus	42.88	2.00e-113	402.00
IUUC-Oin-079357	Oryza indica	65.51	0.00e+00	705.00
IUUC-Ola-086566	Oryzias latipes	45.21	5.00e-115	407.00
IUUC-Oga-089010	Otolemur garnettii	42.67	7.00e-110	390.00
IUUC-Oar-089638	Ovis aries	44.81	2.00e-117	415.00
IUUC-Ptr-091141	Pan troglodytes	44.62	5.00e-117	414.00
IUUC-Pan-092662	Papio anubis	44.62	5.00e-117	414.00
IUUC-Psi-093777	Pelodiscus sinensis	43.68	1.00e-89	322.00
IUUC-Pfo-096390	Poecilia formosa	45.66	2.00e-116	411.00
IUUC-Pab-098250	Pongo abelii	45.55	8.00e-114	403.00
IUUC-Pca-100553	Procavia capensis	44.23	3.00e-114	404.00
IUUC-Pva-102189	Pteropus vampyrus	44.81	2.00e-117	415.00
IUUC-Pgr-103304	Puccinia graminis	34.73	3.00e-83	301.00
IUUC-Ptt-103984	Puccinia triticina	34.73	2.00e-85	308.00
IUUC-Pte-104385	Pyrenophora teres	33.46	2.00e-70	259.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	32.50	2.00e-69	255.00
IUUC-Rno-105581	Rattus norvegicus	44.62	3.00e-117	414.00
IUUC-Sce-106147	Saccharomyces cerevisiae	39.04	2.00e-23	103.00
IUUC-Sha-107071	Sarcophilus harrisii	42.80	4.00e-113	400.00
IUUC-Ssl-108628	Sclerotinia sclerotiorum	33.40	9.00e-65	240.00
IUUC-Smo-109648	Selaginella moellendorffii	71.12	0.00e+00	779.00
IUUC-Sre-115134	Sporisorium reilianum	34.12	5.00e-79	287.00
IUUC-Ssc-116260	Sus scrofa	44.81	2.00e-117	415.00
IUUC-Tgu-116533	Taeniopygia guttata	45.95	1.00e-118	419.00
IUUC-Tru-117800	Takifugu rubripes	45.16	3.00e-117	414.00
IUUC-Tsy-118980	Tarsius syrichta	42.75	2.00e-102	365.00
IUUC-Tni-120334	Tetraodon nigroviridis	43.86	2.00e-76	278.00
IUUC-Tre-121920	Trichoderma reesei	31.19	8.00e-59	220.00
IUUC-Tvi-122294	Trichoderma virens	30.56	1.00e-52	199.00
IUUC-Tme-127026	Tuber melanosporum	35.48	3.00e-74	271.00
IUUC-Tbe-127582	Tupaia belangeri	43.03	3.00e-75	275.00
IUUC-Ttr-128313	Tursiops truncatus	44.81	5.00e-116	410.00
IUUC-Uma-129626	Ustilago maydis	35.23	6.00e-82	297.00
IUUC-Vda-129699	Verticillium dahliae	32.14	6.00e-62	231.00
IUUC-Vpa-130593	Vicugna pacos	46.47	3.00e-109	387.00
IUUC-Xtr-132186	Xenopus tropicalis	46.24	7.00e-102	363.00
IUUC-Xma-133212	Xiphophorus maculatus	45.37	2.00e-116	411.00
IUUC-Yli-134607	Yarrowia lipolytica	54.26	2.00e-38	149.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence