iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074234

Ensembl Protein ID

ENSOCUP00000017061.1

UniProt Accession

G1TJD4; G1TJD4_RABIT

Protein Name

Uncharacterized protein

Gene Name

WDR34

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000012360.3	ENSOCUT00000021011.2	ENSOCUP00000017061.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-20	72.3	483	514

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           ++v+cl+f   ++ ll++G   gt+kvW l+t
   Q: 483  SPVYCLEFnhqQTQLLAAGDAKGTVKVWQLST 514
           79******985448899999********9876 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MATRALPGPL CPAGGEGVAA LATGGAPSAE GPGRPGPLKD ETLGVASVPS QWRGVQGIRG 60
ETKSCQTASI ATAEASAQAR QHVDAQVQTE APEPPSVQPL SHHDAPRLAA FLRRVEAMVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCGGAGTGC GCCGGCGCGA GGGGGGGGCG GCGCCGTCTC TATGGCAACC CGCGCGCTGC 60
CCGGGCCGCT GTGTCCGGCG GGAGGCGAGG GTGTCGCGGC GCTGGCTACC GGCGGGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005868--C:cytoplasmic dynein complex
GO:0005829--C:cytosol
GO:0060271--P:cilium assembly

KEGG

ocu:100355166

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002326	Ailuropoda melanoleuca	87.69	0.00e+00	887.00
IUUC-Apl-004015	Anas platyrhynchos	66.60	1.00e-178	619.00
IUUC-Ame-010762	Astyanax mexicanus	53.41	5.00e-149	520.00
IUUC-Bta-013392	Bos taurus	87.52	0.00e+00	912.00
IUUC-Cja-019374	Callithrix jacchus	87.55	0.00e+00	872.00
IUUC-Cfa-020365	Canis familiaris	87.31	0.00e+00	850.00
IUUC-Csa-023810	Chlorocebus sabaeus	87.48	0.00e+00	918.00
IUUC-Cho-024515	Choloepus hoffmanni	80.21	2.00e-168	585.00
IUUC-Cin-025690	Ciona intestinalis	27.69	1.00e-50	194.00
IUUC-Csv-026220	Ciona savignyi	30.32	1.00e-49	190.00
IUUC-Dre-028439	Danio rerio	51.58	1.00e-145	509.00
IUUC-Dno-029916	Dasypus novemcinctus	84.14	0.00e+00	885.00
IUUC-Dor-030853	Dipodomys ordii	84.51	0.00e+00	915.00
IUUC-Eca-033204	Equus caballus	86.50	0.00e+00	814.00
IUUC-Fca-036470	Felis catus	87.29	0.00e+00	858.00
IUUC-Fal-037484	Ficedula albicollis	64.20	0.00e+00	650.00
IUUC-Gmo-039252	Gadus morhua	50.20	1.00e-139	489.00
IUUC-Gga-040701	Gallus gallus	61.60	7.00e-172	597.00
IUUC-Gac-041440	Gasterosteus aculeatus	50.40	6.00e-139	487.00
IUUC-Ggo-044509	Gorilla gorilla	86.38	0.00e+00	860.00
IUUC-Hsa-046030	Homo sapiens	86.54	0.00e+00	865.00
IUUC-Itr-048001	Ictidomys tridecemlineatus	86.98	0.00e+00	909.00
IUUC-Lch-050603	Latimeria chalumnae	59.48	2.00e-173	602.00
IUUC-Loc-052914	Lepisosteus oculatus	53.04	4.00e-135	474.00
IUUC-Laf-053957	Loxodonta africana	81.40	0.00e+00	707.00
IUUC-Mcc-054805	Macaca mulatta	86.94	0.00e+00	917.00
IUUC-Meu-056115	Macropus eugenii	79.16	0.00e+00	833.00
IUUC-Mga-059377	Meleagris gallopavo	66.10	0.00e+00	647.00
IUUC-Mmr-061203	Microcebus murinus	88.97	0.00e+00	904.00
IUUC-Mdo-062646	Monodelphis domestica	79.36	0.00e+00	811.00
IUUC-Mmu-063156	Mus musculus	85.43	0.00e+00	845.00
IUUC-Mpu-065923	Mustela putorius furo	84.29	0.00e+00	845.00
IUUC-Mlu-067705	Myotis lucifugus	87.31	0.00e+00	926.00
IUUC-Nle-069635	Nomascus leucogenys	87.53	0.00e+00	812.00
IUUC-Opr-070939	Ochotona princeps	73.33	9.00e-162	563.00
IUUC-Ont-072205	Oreochromis niloticus	47.18	6.00e-132	464.00
IUUC-Oan-073427	Ornithorhynchus anatinus	74.36	0.00e+00	709.00
IUUC-Ola-086461	Oryzias latipes	50.89	4.00e-140	491.00
IUUC-Oga-088616	Otolemur garnettii	89.77	0.00e+00	721.00
IUUC-Ptr-090563	Pan troglodytes	86.57	0.00e+00	867.00
IUUC-Pan-092105	Papio anubis	87.48	0.00e+00	894.00
IUUC-Psi-093169	Pelodiscus sinensis	65.59	0.00e+00	683.00
IUUC-Pma-094688	Petromyzon marinus	40.26	4.00e-89	322.00
IUUC-Pfo-096136	Poecilia formosa	50.89	4.00e-126	444.00
IUUC-Pab-098286	Pongo abelii	86.19	0.00e+00	874.00
IUUC-Pca-100577	Procavia capensis	78.36	0.00e+00	811.00
IUUC-Pva-103194	Pteropus vampyrus	87.87	0.00e+00	967.00
IUUC-Rno-105958	Rattus norvegicus	85.17	0.00e+00	855.00
IUUC-Sha-107438	Sarcophilus harrisii	80.80	0.00e+00	814.00
IUUC-Ssc-116210	Sus scrofa	84.67	0.00e+00	895.00
IUUC-Tgu-116704	Taeniopygia guttata	64.84	0.00e+00	652.00
IUUC-Tru-117530	Takifugu rubripes	48.60	2.00e-126	445.00
IUUC-Tni-120848	Tetraodon nigroviridis	44.38	2.00e-103	369.00
IUUC-Ttr-128697	Tursiops truncatus	77.48	0.00e+00	787.00
IUUC-Xtr-132843	Xenopus tropicalis	60.91	0.00e+00	630.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence