iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091235

Ensembl Protein ID

ENSPTRP00000002595.2

UniProt Accession

H2Q0E2; H2Q0E2_PANTR

Genbank Protein ID

JAA10724.1; JAA15153.1; JAA43485.1

Protein Name

DDB1 and CUL4 associated factor 8

Genbank Nucleotide ID

AACZ03005263; GABF01006992; GABE01001254

Gene Name

DCAF8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000001546.3	ENSPTRT00000002826.2	ENSPTRP00000002595.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-22	78.9	191	222
UBD/Beta-Prp	3.10e-45	154.6	187	363

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gHt+ v+ l+f   +t l+sGsdD ++ vWD+
   Q: 191  GHTGCVNTLHFnqRGTWLASGSDDLKVVVWDW 222
           8**********86559***************7 PP

UBD/Beta-Prp

   S: 88   htlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrt 174
           h l+gh+  v +l+f++ g +l+sGs+d  + vwd+  +q + +++sgh++ v  +++ p++  + l+ ++ D++vr+  l+  ++ + 
   Q: 187  HGLEGHTGCVNTLHFNQRGTWLASGSDDLKVVVWDWVRRQPVLDFESGHKSNVFQAKFLPNSgdSTLAMCARDGQVRVAELSATQCCKN 275
           55666666666666666666666666666666666666666666666666666666666665556666666666666666655555555 PP
   S: 175  l..tgghtdsvyslsfdsng.kelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdlrs 253
                +h+++ ++l++++++   ++s+++d  v   dl+     ++ +v + ++ +   + + +   n++ +++g+ D+ +ri+d r+
   Q: 276  TkrVAQHKGASHKLALEPDSpCTFLSAGEDAVVFTIDLRqdrpaSKLVVTKEKEKKVGLYTIYVNpANTHQFAVGGRDQFVRIYDQRK 363
           4452336666666666666644466666666666666665555444444444444445555555544555666666666666666544 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSSKGSSTDG RTDLANGSLS SSPEEMSGAE EGRETSSGIE VEASDLSLSL TGDDGGPNRT 60
STESRGTDTE SSGEDKDSDS MEDTGHYSIN DENRVHDRSE EEEEEEEEEE EEQPRRRVQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGTAAGAT GGCGGCGGCG TTGGTGGTGG CAGTGGACGG GGCGGCTGGG CCTGGAACAG 60
TCGGAGCAGC CGCTAGCAGA AGGATGACCC AAGACGGGAA GCGGGCTGCT GAGCCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

ptr:457434

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	40.93	2.00e-83	302.00
IUUC-Aml-001810	Ailuropoda melanoleuca	98.16	0.00e+00	1073.00
IUUC-Atr-002578	Amborella trichopoda	43.11	5.00e-82	298.00
IUUC-Apl-003872	Anas platyrhynchos	66.88	4.00e-160	557.00
IUUC-Aca-004853	Anolis carolinensis	82.11	0.00e+00	910.00
IUUC-Aly-005505	Arabidopsis lyrata	41.04	2.00e-79	289.00
IUUC-Ath-007629	Arabidopsis thaliana	41.55	2.00e-77	283.00
IUUC-Ame-011615	Astyanax mexicanus	62.83	0.00e+00	694.00
IUUC-Bta-013549	Bos taurus	97.82	0.00e+00	1082.00
IUUC-Bdi-014538	Brachypodium distachyon	39.95	2.00e-74	273.00
IUUC-Cja-018802	Callithrix jacchus	98.99	0.00e+00	1084.00
IUUC-Cfa-020535	Canis familiaris	98.49	0.00e+00	1078.00
IUUC-Cpo-022216	Cavia porcellus	96.31	0.00e+00	1075.00
IUUC-Csa-023095	Chlorocebus sabaeus	99.50	0.00e+00	1090.00
IUUC-Cho-024446	Choloepus hoffmanni	90.13	4.00e-145	507.00
IUUC-Cin-025683	Ciona intestinalis	57.72	6.00e-144	503.00
IUUC-Csv-026331	Ciona savignyi	57.52	9.00e-126	443.00
IUUC-Dre-027731	Danio rerio	63.70	0.00e+00	675.00
IUUC-Dno-029192	Dasypus novemcinctus	96.31	0.00e+00	1045.00
IUUC-Dme-032115	Drosophila melanogaster	42.66	2.00e-83	303.00
IUUC-Ete-032932	Echinops telfairi	88.10	0.00e+00	894.00
IUUC-Eca-034100	Equus caballus	98.83	0.00e+00	1083.00
IUUC-Fca-036138	Felis catus	97.65	0.00e+00	1075.00
IUUC-Fal-037132	Ficedula albicollis	96.46	2.00e-55	206.00
IUUC-Gmo-038895	Gadus morhua	77.89	0.00e+00	630.00
IUUC-Gga-040447	Gallus gallus	88.46	0.00e+00	936.00
IUUC-Gac-041796	Gasterosteus aculeatus	77.51	0.00e+00	673.00
IUUC-Gma-044062	Glycine max	39.73	2.00e-74	273.00
IUUC-Ggo-045613	Gorilla gorilla	100.00	0.00e+00	1066.00
IUUC-Hsa-046377	Homo sapiens	100.00	0.00e+00	1097.00
IUUC-Hvu-047687	Hordeum vulgare	42.74	3.00e-85	308.00
IUUC-Itr-048599	Ictidomys tridecemlineatus	90.95	0.00e+00	971.00
IUUC-Lch-050050	Latimeria chalumnae	67.08	0.00e+00	639.00
IUUC-Lpe-051191	Leersia perrieri	41.85	4.00e-81	295.00
IUUC-Laf-053407	Loxodonta africana	96.98	0.00e+00	1022.00
IUUC-Mcc-055604	Macaca mulatta	99.50	0.00e+00	1092.00
IUUC-Meu-056043	Macropus eugenii	90.19	0.00e+00	857.00
IUUC-Mtr-057813	Medicago truncatula	40.89	2.00e-81	296.00
IUUC-Mga-059697	Meleagris gallopavo	88.10	3.00e-171	594.00
IUUC-Mmr-061338	Microcebus murinus	99.16	0.00e+00	1087.00
IUUC-Mdo-062689	Monodelphis domestica	97.12	0.00e+00	985.00
IUUC-Mmu-063993	Mus musculus	95.48	0.00e+00	1055.00
IUUC-Mac-064558	Musa acuminata	40.30	3.00e-82	298.00
IUUC-Mpu-066622	Mustela putorius furo	97.32	0.00e+00	1073.00
IUUC-Mlu-067235	Myotis lucifugus	97.82	0.00e+00	1012.00
IUUC-Nle-069048	Nomascus leucogenys	99.50	0.00e+00	1090.00
IUUC-Opr-070489	Ochotona princeps	80.06	2.00e-140	493.00
IUUC-Ont-072060	Oreochromis niloticus	77.16	0.00e+00	687.00
IUUC-Ocu-074684	Oryctolagus cuniculus	97.65	0.00e+00	1045.00
IUUC-Oba-075746	Oryza barthii	41.39	3.00e-84	305.00
IUUC-Obr-076629	Oryza brachyantha	42.07	4.00e-86	311.00
IUUC-Ogl-077243	Oryza glaberrima	43.12	9.00e-86	310.00
IUUC-Ogu-078029	Oryza glumaepatula	43.12	1.00e-85	310.00
IUUC-Oin-080109	Oryza indica	39.09	2.00e-73	269.00
IUUC-Olo-080308	Oryza longistaminata	41.97	4.00e-83	301.00
IUUC-Ome-081126	Oryza meridionalis	43.05	3.00e-83	301.00
IUUC-Oni-083114	Oryza nivara	43.12	5.00e-86	311.00
IUUC-Opu-083288	Oryza punctata	42.25	2.00e-83	302.00
IUUC-Oru-084724	Oryza rufipogon	43.12	1.00e-85	310.00
IUUC-Osa-085895	Oryza sativa	43.12	9.00e-86	310.00
IUUC-Olu-087847	Ostreococcus lucimarinus	29.86	6.00e-35	141.00
IUUC-Oga-088849	Otolemur garnettii	98.83	0.00e+00	1085.00
IUUC-Oar-089474	Ovis aries	94.97	0.00e+00	1027.00
IUUC-Pan-092895	Papio anubis	99.50	0.00e+00	1090.00
IUUC-Psi-093973	Pelodiscus sinensis	90.64	0.00e+00	972.00
IUUC-Ppa-095764	Physcomitrella patens	42.20	5.00e-85	308.00
IUUC-Pfo-097275	Poecilia formosa	77.83	0.00e+00	687.00
IUUC-Pab-098299	Pongo abelii	99.83	0.00e+00	1093.00
IUUC-Pop-099784	Populus trichocarpa	41.94	6.00e-79	288.00
IUUC-Pca-100729	Procavia capensis	93.63	0.00e+00	1002.00
IUUC-Ppe-101712	Prunus persica	40.47	4.00e-79	288.00
IUUC-Pva-103030	Pteropus vampyrus	98.99	0.00e+00	1086.00
IUUC-Rno-105416	Rattus norvegicus	96.98	0.00e+00	1070.00
IUUC-Sha-106545	Sarcophilus harrisii	97.83	0.00e+00	1004.00
IUUC-Smo-109128	Selaginella moellendorffii	46.37	1.00e-90	326.00
IUUC-Sit-110823	Setaria italica	40.92	2.00e-84	306.00
IUUC-Sly-111605	Solanum lycopersicum	38.61	1.00e-75	276.00
IUUC-Stu-111978	Solanum tuberosum	40.65	3.00e-81	295.00
IUUC-Sbi-114455	Sorghum bicolor	41.01	1.00e-79	290.00
IUUC-Ssc-115612	Sus scrofa	98.49	0.00e+00	1080.00
IUUC-Tru-117708	Takifugu rubripes	77.40	0.00e+00	689.00
IUUC-Tsy-119579	Tarsius syrichta	89.20	0.00e+00	744.00
IUUC-Tni-120739	Tetraodon nigroviridis	70.19	0.00e+00	696.00
IUUC-Tca-121555	Theobroma cacao	42.03	1.00e-79	290.00
IUUC-Tae-125509	Triticum aestivum	44.78	1.00e-86	313.00
IUUC-Tur-126617	Triticum urartu	41.53	5.00e-73	268.00
IUUC-Tbe-128115	Tupaia belangeri	95.42	0.00e+00	715.00
IUUC-Ttr-128231	Tursiops truncatus	93.47	0.00e+00	1006.00
IUUC-Vpa-130377	Vicugna pacos	81.24	0.00e+00	872.00
IUUC-Vvi-131540	Vitis vinifera	41.36	3.00e-79	289.00
IUUC-Xtr-131860	Xenopus tropicalis	77.78	0.00e+00	826.00
IUUC-Xma-133371	Xiphophorus maculatus	77.64	0.00e+00	688.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence