iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-073749

Ensembl Protein ID

ENSOCUP00000003739.2

UniProt Accession

G1SLK0; G1SLK0_RABIT

Genbank Protein ID

ENSOCUP00000003739

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02061321

Gene Name

TNRC6A

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000004325.3	ENSOCUT00000004327.3	ENSOCUP00000003739.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	35.13	9.00e-34	144.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

VPEQIKPSVS QPQPANSNNG TSTATSTNNN AKRATANTQP PPQALPRYPR EVPPRFRHQE 60
HKQLLKRGQH FPVIAANLGS AVKVLNSQSE GSAFTHQQPQ NNGEVQSSKN QSDINHNTSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCCAGAAC AGATAAAGCC CAGTGTAAGC CAGCCTCAGC CTGCCAACTC TAATAACGGC 60
ACTTCCACAG CAACCAGCAC TAATAATAAT GCCAAGCGAG CTACAGCCAA CAGTCAGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033501--TNRC6A

Pfam

PF10427--Ago_hook
PF16608--TNRC6-PABC_bdg

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0035068--C:micro-ribonucleoprotein complex
GO:0005654--C:nucleoplasm
GO:0000932--C:P-body
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0035278--P:miRNA mediated inhibition of translation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	92.76	0.00e+00	2896.00
IUUC-Bta-012915	Bos taurus	88.51	0.00e+00	2704.00
IUUC-Cfa-020452	Canis familiaris	90.19	0.00e+00	2821.00
IUUC-Csa-023169	Chlorocebus sabaeus	93.13	0.00e+00	2868.00
IUUC-Cho-024655	Choloepus hoffmanni	90.68	0.00e+00	2187.00
IUUC-Dno-029734	Dasypus novemcinctus	91.66	0.00e+00	2860.00
IUUC-Dor-030671	Dipodomys ordii	95.60	0.00e+00	1980.00
IUUC-Dme-032014	Drosophila melanogaster	34.62	8.00e-30	126.00
IUUC-Eeu-034572	Erinaceus europaeus	48.80	9.00e-44	172.00
IUUC-Lch-049619	Latimeria chalumnae	68.33	0.00e+00	2072.00
IUUC-Meu-056275	Macropus eugenii	88.16	0.00e+00	1352.00
IUUC-Mga-059241	Meleagris gallopavo	79.24	0.00e+00	2448.00
IUUC-Mvi-060308	Microbotryum violaceum	32.81	7.40e-01	28.50
IUUC-Mmr-061348	Microcebus murinus	91.15	0.00e+00	2847.00
IUUC-Mmu-064259	Mus musculus	93.57	0.00e+00	2173.00
IUUC-Mpu-066534	Mustela putorius furo	80.94	0.00e+00	2311.00
IUUC-Mlu-067834	Myotis lucifugus	90.20	0.00e+00	2843.00
IUUC-Nle-069168	Nomascus leucogenys	94.01	0.00e+00	2862.00
IUUC-Opr-070976	Ochotona princeps	36.72	2.00e-91	331.00
IUUC-Oga-088116	Otolemur garnettii	93.69	0.00e+00	2923.00
IUUC-Oar-090041	Ovis aries	89.87	0.00e+00	2588.00
IUUC-Pma-094508	Petromyzon marinus	41.23	2.00e-43	170.00
IUUC-Pab-097935	Pongo abelii	94.44	0.00e+00	2852.00
IUUC-Pva-102376	Pteropus vampyrus	43.65	3.00e-65	244.00
IUUC-Rno-105508	Rattus norvegicus	89.38	0.00e+00	2742.00
IUUC-Sar-113036	Sorex araneus	44.87	2.00e-41	165.00
IUUC-Tsy-118786	Tarsius syrichta	36.16	8.00e-83	302.00
IUUC-Tbe-127551	Tupaia belangeri	90.72	0.00e+00	2735.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence