iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000875

Ensembl Protein ID

EMT02321

UniProt Accession

N1QR84; N1QR84_AEGTA

Genbank Protein ID

EMT02321.1

Protein Name

General transcription factor 3C polypeptide 2

Genbank Nucleotide ID

KD626030

Gene Name

F775_08334

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08334	EMT02321	EMT02321

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-08	34.1	725	754

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf...sdtllvsGsdDgtikvWDlrtgvl 35
           +++   + +++++G++Dgt+ +W ++t+ +
   Q: 725  VDWspsPHDMILAGCHDGTVALWKFSTDLP 754
           789975449***************999876 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MAAPPLRPEA EEGSKGAEVC LFDQSQEDFS RAVRAISELA TGDPQPGFPD AEAERLASSV 60
TFLREWRHFS YEPKGVSFVY GAGSASSGDD TPEITLPQFS SASFPQVTHL EDGRDKNTDS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCGC CGCCGCTCCG GCCGGAGGCG GAAGAGGGCA GCAAGGGCGC CGAGGTCTGC 60
CTGTTCGACC AGTCGCAGGA GGATTTCTCC AGGGCGGTAC GCGCCATCTC GGAGCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Interpro

IPR017956--AT_hook_DNA-bd_motif
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PRINTS

PR00929--ATHOOK

SMART

SM00384--AT_hook
SM00320--WD40

Gene Ontology

GO:0003677--F:DNA binding

KEGG

ats:F775_08334

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003185	Anas platyrhynchos	27.59	1.00e-17	84.70
IUUC-Aca-005245	Anolis carolinensis	27.00	5.00e-14	72.80
IUUC-Ame-010654	Astyanax mexicanus	30.53	1.00e-15	78.20
IUUC-Dre-028735	Danio rerio	27.31	7.00e-18	85.50
IUUC-Dno-028895	Dasypus novemcinctus	27.42	7.00e-12	65.50
IUUC-Dse-031276	Dothistroma septosporum	29.10	5.00e-06	45.80
IUUC-Fal-037637	Ficedula albicollis	28.02	2.00e-18	87.00
IUUC-Fso-038116	Fusarium solani	29.10	1.00e-07	52.00
IUUC-Gga-040991	Gallus gallus	27.16	9.00e-19	88.60
IUUC-Hvu-047169	Hordeum vulgare	80.62	0.00e+00	1251.00
IUUC-Lch-050384	Latimeria chalumnae	27.50	2.00e-12	67.40
IUUC-Loc-052778	Lepisosteus oculatus	30.04	2.00e-19	90.50
IUUC-Laf-054474	Loxodonta africana	27.16	1.00e-11	65.10
IUUC-Mga-059757	Meleagris gallopavo	35.05	9.00e-11	59.30
IUUC-Ont-071367	Oreochromis niloticus	29.41	2.00e-15	77.40
IUUC-Psi-094020	Pelodiscus sinensis	28.02	1.00e-16	81.30
IUUC-Pfo-097023	Poecilia formosa	27.43	7.00e-10	58.90
IUUC-Tru-118675	Takifugu rubripes	28.69	5.00e-15	75.90
IUUC-Tni-120125	Tetraodon nigroviridis	30.08	2.00e-08	52.80
IUUC-Tae-125287	Triticum aestivum	93.82	0.00e+00	1597.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence