iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068915

Ensembl Protein ID

EAA31900

UniProt Accession

Q1K7E9; Q1K7E9_NEUCR

Genbank Protein ID

EAA31900.1

Protein Name

RNA polymerase II Elongator subunit

Genbank Nucleotide ID

CM002240

Gene Name

NCU04176

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU04176	EAA31900	EAA31900

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-30	102.8	55	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sd..tllvsGsdDgtikvWDlrt 32
           gHt+ v++++f     ++  t+lvsG+dD +++vW l++
   Q: 55   GHTAHVRAVKFlprlqDEksTYLVSGGDDQSLRVWALDS 93
           8**************83356***************9865 PP

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MTETAIDPRY LSAGANRYAA AADWAENGLV AFGADINVCL WNPSDTVGIS QILSGHTAHV 60
RAVKFLPRLQ DEKSTYLVSG GDDQSLRVWA LDSETGAATC VQTLQEHTAP INYLAALKIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCGACTTC TCTTCTTTAA CTACAATTCA CGACTTCCCA TCACTCACTG ACTGTTTACT 60
AGTGAGTGTG ATCTGAAAAT AGGGGTCAAA ATCAAAGAGA AAAATATCAT GACGGAAACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0005634--C:nucleus
GO:0032447--P:protein urmylation
GO:0006357--P:regulation of transcription from RNA polymerase II promoter
GO:0002098--P:tRNA wobble uridine modification

KEGG

ncr:NCU04176

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	30.66	1.00e-82	299.00
IUUC-Aml-002049	Ailuropoda melanoleuca	29.99	6.00e-80	290.00
IUUC-Atr-002456	Amborella trichopoda	29.23	2.00e-82	298.00
IUUC-Apl-004053	Anas platyrhynchos	30.21	3.00e-95	341.00
IUUC-Aca-004535	Anolis carolinensis	28.85	1.00e-85	309.00
IUUC-Aly-005746	Arabidopsis lyrata	29.73	2.00e-84	305.00
IUUC-Ath-006664	Arabidopsis thaliana	29.59	1.00e-83	302.00
IUUC-Ago-007971	Ashbya gossypii	37.82	2.00e-118	417.00
IUUC-Acl-008173	Aspergillus clavatus	43.00	0.00e+00	625.00
IUUC-Afl-008665	Aspergillus flavus	41.85	1.00e-84	305.00
IUUC-Afu-008976	Aspergillus fumigatus	43.49	5.00e-177	612.00
IUUC-Ani-009284	Aspergillus nidulans	42.06	6.00e-167	579.00
IUUC-Ang-009809	Aspergillus niger	42.39	2.00e-174	603.00
IUUC-Aor-009959	Aspergillus oryzae	42.66	1.00e-177	615.00
IUUC-Ate-010442	Aspergillus terreus	43.14	0.00e+00	627.00
IUUC-Ame-011409	Astyanax mexicanus	30.86	2.00e-93	335.00
IUUC-Bgr-012137	Blumeria graminis	44.63	0.00e+00	644.00
IUUC-Bta-012892	Bos taurus	29.97	6.00e-95	340.00
IUUC-Bci-013944	Botrytis cinerea	48.00	0.00e+00	669.00
IUUC-Bdi-014512	Brachypodium distachyon	31.84	4.00e-89	320.00
IUUC-Bol-015741	Brassica oleracea	29.33	3.00e-87	314.00
IUUC-Bra-017367	Brassica rapa	30.04	3.00e-89	321.00
IUUC-Cel-018712	Caenorhabditis elegans	24.10	4.00e-48	184.00
IUUC-Cja-018865	Callithrix jacchus	28.19	8.00e-87	313.00
IUUC-Cfa-021006	Canis familiaris	30.58	3.00e-97	348.00
IUUC-Cpo-021370	Cavia porcellus	28.60	2.00e-90	325.00
IUUC-Csa-023845	Chlorocebus sabaeus	29.90	6.00e-91	327.00
IUUC-Cho-024640	Choloepus hoffmanni	32.74	7.00e-61	226.00
IUUC-Cin-025772	Ciona intestinalis	29.33	2.00e-88	318.00
IUUC-Csv-025891	Ciona savignyi	27.59	3.00e-80	291.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	52.49	0.00e+00	778.00
IUUC-Cne-027081	Cryptococcus neoformans	32.19	2.00e-87	315.00
IUUC-Cme-027225	Cyanidioschyzon merolae	25.04	3.00e-35	142.00
IUUC-Dre-028250	Danio rerio	30.49	9.00e-91	326.00
IUUC-Dno-028847	Dasypus novemcinctus	29.90	1.00e-92	332.00
IUUC-Dor-030351	Dipodomys ordii	28.89	2.00e-86	311.00
IUUC-Dse-031317	Dothistroma septosporum	46.53	4.00e-166	576.00
IUUC-Dme-032019	Drosophila melanogaster	31.44	3.00e-97	347.00
IUUC-Ete-033194	Echinops telfairi	30.28	3.00e-51	194.00
IUUC-Eca-033779	Equus caballus	30.17	1.00e-94	338.00
IUUC-Eeu-034790	Erinaceus europaeus	27.38	5.00e-42	164.00
IUUC-Fca-036090	Felis catus	32.85	1.00e-95	342.00
IUUC-Fal-037663	Ficedula albicollis	28.68	5.00e-88	317.00
IUUC-Fox-037828	Fusarium oxysporum	51.69	0.00e+00	813.00
IUUC-Fso-038462	Fusarium solani	52.89	0.00e+00	788.00
IUUC-Gmo-039450	Gadus morhua	29.97	1.00e-89	322.00
IUUC-Ggr-040023	Gaeumannomyces graminis	48.45	0.00e+00	746.00
IUUC-Gga-040480	Gallus gallus	30.37	3.00e-94	338.00
IUUC-Gac-041544	Gasterosteus aculeatus	29.36	8.00e-91	326.00
IUUC-Gma-044048	Glycine max	29.12	3.00e-91	327.00
IUUC-Ggo-045381	Gorilla gorilla	28.13	1.00e-82	299.00
IUUC-Hsa-046096	Homo sapiens	27.57	4.00e-84	304.00
IUUC-Hvu-047494	Hordeum vulgare	31.23	2.00e-86	311.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	26.51	3.00e-72	264.00
IUUC-Kpa-049241	Komagataella pastoris	34.10	1.00e-108	385.00
IUUC-Lch-050512	Latimeria chalumnae	31.25	2.00e-86	312.00
IUUC-Lpe-051448	Leersia perrieri	32.90	9.00e-92	329.00
IUUC-Loc-051882	Lepisosteus oculatus	31.39	8.00e-98	349.00
IUUC-Lma-053023	Leptosphaeria maculans	44.20	0.00e+00	626.00
IUUC-Laf-054519	Loxodonta africana	29.46	8.00e-92	329.00
IUUC-Mcc-055580	Macaca mulatta	28.13	6.00e-86	310.00
IUUC-Meu-056606	Macropus eugenii	32.52	2.00e-21	95.90
IUUC-Mor-057109	Magnaporthe oryzae	52.21	0.00e+00	818.00
IUUC-Mpo-057297	Magnaporthe poae	48.05	0.00e+00	753.00
IUUC-Mtr-058348	Medicago truncatula	30.11	5.00e-95	340.00
IUUC-Mla-059159	Melampsora laricipopulina	27.11	8.00e-66	243.00
IUUC-Mga-059778	Meleagris gallopavo	29.64	5.00e-60	223.00
IUUC-Mvi-060447	Microbotryum violaceum	32.36	5.00e-91	327.00
IUUC-Mmr-061139	Microcebus murinus	28.66	1.00e-87	315.00
IUUC-Mdo-061866	Monodelphis domestica	29.14	1.00e-95	342.00
IUUC-Mmu-063390	Mus musculus	28.96	4.00e-87	313.00
IUUC-Mac-064693	Musa acuminata	30.27	9.00e-92	329.00
IUUC-Mpu-066547	Mustela putorius furo	30.56	3.00e-92	331.00
IUUC-Mlu-067156	Myotis lucifugus	30.57	6.00e-95	340.00
IUUC-Nfi-068616	Neosartorya fischeri	43.24	3.00e-180	623.00
IUUC-Nle-069958	Nomascus leucogenys	29.48	6.00e-88	317.00
IUUC-Opr-071093	Ochotona princeps	28.33	4.00e-37	148.00
IUUC-Ont-072178	Oreochromis niloticus	30.29	9.00e-94	336.00
IUUC-Oan-073667	Ornithorhynchus anatinus	28.27	4.00e-87	314.00
IUUC-Ocu-074662	Oryctolagus cuniculus	30.51	3.00e-92	331.00
IUUC-Oba-075577	Oryza barthii	33.03	2.00e-94	338.00
IUUC-Obr-076566	Oryza brachyantha	31.26	3.00e-95	341.00
IUUC-Ogl-077054	Oryza glaberrima	32.76	2.00e-94	338.00
IUUC-Ogu-078846	Oryza glumaepatula	32.76	1.00e-92	332.00
IUUC-Oin-079084	Oryza indica	32.81	4.00e-94	337.00
IUUC-Olo-080933	Oryza longistaminata	30.23	1.00e-74	272.00
IUUC-Ome-081500	Oryza meridionalis	29.06	2.00e-79	288.00
IUUC-Oni-082352	Oryza nivara	32.68	4.00e-95	340.00
IUUC-Opu-084116	Oryza punctata	30.41	3.00e-90	324.00
IUUC-Oru-085249	Oryza rufipogon	32.81	4.00e-94	337.00
IUUC-Osa-086270	Oryza sativa	32.81	4.00e-94	337.00
IUUC-Ola-086625	Oryzias latipes	27.35	2.00e-73	268.00
IUUC-Olu-087638	Ostreococcus lucimarinus	30.13	6.00e-54	203.00
IUUC-Oga-088634	Otolemur garnettii	26.52	8.00e-70	256.00
IUUC-Oar-089475	Ovis aries	30.03	4.00e-93	334.00
IUUC-Ptr-091131	Pan troglodytes	29.24	3.00e-90	324.00
IUUC-Pan-092869	Papio anubis	29.57	5.00e-92	330.00
IUUC-Psi-093146	Pelodiscus sinensis	31.50	4.00e-84	303.00
IUUC-Pma-094479	Petromyzon marinus	31.53	8.00e-82	296.00
IUUC-Pno-095061	Phaeosphaeria nodorum	45.79	5.00e-137	479.00
IUUC-Ppa-095618	Physcomitrella patens	31.53	9.00e-84	303.00
IUUC-Pfo-096816	Poecilia formosa	29.64	2.00e-90	325.00
IUUC-Pab-097548	Pongo abelii	29.59	4.00e-91	327.00
IUUC-Pop-099643	Populus trichocarpa	32.46	4.00e-89	320.00
IUUC-Pca-100983	Procavia capensis	31.79	5.00e-44	171.00
IUUC-Ppe-101301	Prunus persica	31.56	2.00e-98	351.00
IUUC-Pva-102460	Pteropus vampyrus	30.29	2.00e-91	328.00
IUUC-Pgr-103507	Puccinia graminis	31.07	1.00e-87	315.00
IUUC-Ptt-103892	Puccinia triticina	30.62	6.00e-77	280.00
IUUC-Pte-104283	Pyrenophora teres	44.27	0.00e+00	649.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	44.54	2.00e-180	624.00
IUUC-Rno-105842	Rattus norvegicus	32.04	6.00e-88	317.00
IUUC-Sce-106459	Saccharomyces cerevisiae	35.91	3.00e-121	427.00
IUUC-Sha-106586	Sarcophilus harrisii	25.33	3.00e-65	241.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	33.97	1.00e-99	355.00
IUUC-Spo-108302	Schizosaccharomyces pombe	32.30	6.00e-103	366.00
IUUC-Smo-108919	Selaginella moellendorffii	28.11	1.00e-80	293.00
IUUC-Sit-109915	Setaria italica	30.28	1.00e-94	339.00
IUUC-Sly-111714	Solanum lycopersicum	30.63	2.00e-90	325.00
IUUC-Stu-112631	Solanum tuberosum	30.43	1.00e-91	328.00
IUUC-Sar-113200	Sorex araneus	31.56	3.00e-58	218.00
IUUC-Sbi-114582	Sorghum bicolor	29.85	5.00e-92	330.00
IUUC-Sre-115001	Sporisorium reilianum	28.95	1.00e-51	197.00
IUUC-Ssc-115519	Sus scrofa	30.09	4.00e-95	340.00
IUUC-Tgu-116987	Taeniopygia guttata	28.70	1.00e-88	319.00
IUUC-Tru-118476	Takifugu rubripes	28.46	4.00e-83	301.00
IUUC-Tsy-119230	Tarsius syrichta	41.18	6.00e-25	107.00
IUUC-Tni-120448	Tetraodon nigroviridis	25.22	2.00e-28	119.00
IUUC-Tca-121650	Theobroma cacao	30.29	1.00e-89	322.00
IUUC-Tre-122086	Trichoderma reesei	53.40	0.00e+00	763.00
IUUC-Tvi-122397	Trichoderma virens	51.15	0.00e+00	716.00
IUUC-Tae-123972	Triticum aestivum	31.18	2.00e-86	311.00
IUUC-Tur-126578	Triticum urartu	31.32	2.00e-86	312.00
IUUC-Tme-126927	Tuber melanosporum	40.54	6.00e-151	526.00
IUUC-Tbe-127922	Tupaia belangeri	36.00	2.00e-37	149.00
IUUC-Ttr-128918	Tursiops truncatus	30.29	2.00e-95	341.00
IUUC-Uma-129474	Ustilago maydis	28.66	9.00e-47	181.00
IUUC-Vda-129944	Verticillium dahliae	51.60	0.00e+00	758.00
IUUC-Vpa-130693	Vicugna pacos	32.81	2.00e-92	332.00
IUUC-Vvi-130949	Vitis vinifera	30.70	7.00e-93	333.00
IUUC-Xtr-132639	Xenopus tropicalis	28.36	1.00e-83	302.00
IUUC-Xma-134223	Xiphophorus maculatus	30.00	1.00e-59	222.00
IUUC-Yli-134601	Yarrowia lipolytica	37.83	1.00e-124	438.00
IUUC-Zma-135952	Zea mays	30.09	2.00e-92	332.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence