iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-003046

Ensembl Protein ID

ERM99682

UniProt Accession

W1NVR0; W1NVR0_AMBTC

Genbank Protein ID

ERM99682.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI394994

Gene Name

AMTR_s00099p00054090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00099p00054090	ERM99682	ERM99682

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-14	52.1	511	546

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sd..tllvsGsdDgtikvWD 29
           H++++t++++      s+   ll++Gs Dg++kvW+
   Q: 511  HNSWITAISWgicmvdSNpmLLLATGSSDGSVKVWS 546
           **************984433558************8 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MSSRFQIAAL VGAPFYPNSV VWSEENLVAI ASGHIVTILN PAIVDGPRGV ITASHGPPFD 60
VGTVERNDLF TSCLMHACLS RDVRPCVRSI SWSPQGMAPN SGCLLAVCTT DGRVKLYHAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCGC GTTTCCAGAT TGCGGCACTG GTTGGAGCTC CATTCTATCC GAATTCTGTT 60
GTCTGGTCCG AAGAGAATTT GGTGGCTATC GCCTCCGGTC ATATCGTTAC CATACTGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011041--Quinoprot_gluc/sorb_DH
IPR024761--TFIIIC_delta_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12657--TFIIIC_delta
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0003824--F:catalytic activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005715	Arabidopsis lyrata	39.79	8.00e-94	337.00
IUUC-Ath-007637	Arabidopsis thaliana	39.85	3.00e-92	332.00
IUUC-Bdi-014902	Brachypodium distachyon	39.67	1.00e-90	327.00
IUUC-Bol-016169	Brassica oleracea	41.44	7.00e-93	333.00
IUUC-Bra-017736	Brassica rapa	41.13	6.00e-93	334.00
IUUC-Gma-044065	Glycine max	43.66	2.00e-116	412.00
IUUC-Hvu-047339	Hordeum vulgare	41.25	1.00e-07	46.60
IUUC-Mtr-057870	Medicago truncatula	41.15	8.00e-116	410.00
IUUC-Mga-059796	Meleagris gallopavo	23.86	5.00e-04	38.10
IUUC-Mac-065235	Musa acuminata	47.95	3.00e-102	365.00
IUUC-Ogl-077286	Oryza glaberrima	33.58	6.00e-92	330.00
IUUC-Oin-079863	Oryza indica	35.46	2.00e-91	329.00
IUUC-Oru-084242	Oryza rufipogon	33.78	4.00e-81	295.00
IUUC-Osa-085660	Oryza sativa	35.46	5.00e-91	327.00
IUUC-Ppa-095823	Physcomitrella patens	35.53	2.00e-61	229.00
IUUC-Pop-098900	Populus trichocarpa	45.37	1.00e-127	449.00
IUUC-Ppe-101763	Prunus persica	43.76	1.00e-124	439.00
IUUC-Smo-108757	Selaginella moellendorffii	32.59	5.00e-57	215.00
IUUC-Sit-110507	Setaria italica	39.61	2.00e-95	342.00
IUUC-Sly-111401	Solanum lycopersicum	44.47	7.00e-112	396.00
IUUC-Stu-112879	Solanum tuberosum	47.33	8.00e-60	223.00
IUUC-Tca-121440	Theobroma cacao	47.39	4.00e-123	434.00
IUUC-Tae-124422	Triticum aestivum	40.44	1.00e-98	353.00
IUUC-Vvi-131537	Vitis vinifera	46.97	8.00e-119	420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence