iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000006867.7	ENSRNOT00000065396.3	ENSRNOP00000059718.1
ENSRNOG00000006867.7	ENSRNOT00000091263.1	ENSRNOP00000068767.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	25.27	2.10e-01	32.00	IUUC-Sce-106248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MDGFYDQQVP YVVTNSQRGR NCTEKPTNVR KRKFINRDLA HDSEELFQDL SQLQETWLAE 60
AQVPDNDEQF VPDYQAESLA FHGLPLKIKK EPHSPCSELG SACSQEQPFK FSYGEKCLYN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACATTCTCG TTTCCAAACG TCCCATCATT GTCCTTGTAA CCCGAGCCCT CCCTGCTCTC 60
CCCCCAACTT CTGGTTGGAA GAAGTGAAAT CCTCAAGTAC AGTAAGTGAC ACCCTCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR000418--Ets_dom
IPR006715--ETS_PEA3_N
IPR032928--ETS_V1
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS00345--ETS_DOMAIN_1
PS00346--ETS_DOMAIN_2
PS50061--ETS_DOMAIN_3

Pfam

PF00178--Ets
PF04621--ETS_PEA3_N

PRINTS

PR00454--ETSDOMAIN

SMART

SM00413--ETS

Gene Ontology

GO:0005634--C:nucleus
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981--F:RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0001077--F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0007411--P:axon guidance
GO:0030154--P:cell differentiation
GO:0007638--P:mechanosensory behavior
GO:0007517--P:muscle organ development
GO:0048935--P:peripheral nervous system neuron development
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001295	Ailuropoda melanoleuca	97.48	0.00e+00	942.00
IUUC-Apl-003730	Anas platyrhynchos	93.92	0.00e+00	914.00
IUUC-Bta-012715	Bos taurus	97.48	0.00e+00	941.00
IUUC-Cfa-020291	Canis familiaris	97.48	0.00e+00	942.00
IUUC-Cpo-021597	Cavia porcellus	96.86	0.00e+00	939.00
IUUC-Csa-023507	Chlorocebus sabaeus	97.90	0.00e+00	947.00
IUUC-Dno-029500	Dasypus novemcinctus	97.48	0.00e+00	940.00
IUUC-Eca-033486	Equus caballus	97.49	0.00e+00	940.00
IUUC-Eeu-034839	Erinaceus europaeus	91.84	0.00e+00	877.00
IUUC-Fal-037436	Ficedula albicollis	94.34	0.00e+00	917.00
IUUC-Gga-040301	Gallus gallus	94.13	0.00e+00	915.00
IUUC-Mga-059333	Meleagris gallopavo	94.13	0.00e+00	915.00
IUUC-Mlu-067954	Myotis lucifugus	96.86	0.00e+00	936.00
IUUC-Oga-088263	Otolemur garnettii	92.31	0.00e+00	884.00
IUUC-Oar-090302	Ovis aries	96.47	0.00e+00	934.00
IUUC-Ptr-090472	Pan troglodytes	97.90	0.00e+00	947.00
IUUC-Pan-091878	Papio anubis	97.09	0.00e+00	941.00
IUUC-Pab-097577	Pongo abelii	97.90	0.00e+00	947.00
IUUC-Pva-102919	Pteropus vampyrus	94.67	0.00e+00	895.00
IUUC-Sce-106248	Saccharomyces cerevisiae	25.27	2.20e-01	32.00
IUUC-Ssc-115379	Sus scrofa	97.28	0.00e+00	939.00
IUUC-Tgu-116895	Taeniopygia guttata	93.51	0.00e+00	905.00
IUUC-Ttr-128445	Tursiops truncatus	84.05	0.00e+00	792.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence