iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ocu-074262

Ensembl Protein ID

ENSOCUP00000011212.2

UniProt Accession

G1T4K4; G1T4K4_RABIT

Genbank Protein ID

ENSOCUP00000011212

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02056406

Gene Name

IFT122

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000013015.2	ENSOCUT00000013022.2	ENSOCUP00000011212.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-10	38.6	321	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWD 29
           +++v+ ++  +d +++v+G+ Dgti  + 
   Q: 321  NSWVWTCRVkPDsNYVVVGCQDGTISFYQ 349
           7999**999*999************8775 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MRAVLTWRDK VEQCIYDLAF KPDGTQLILA AGNRLLVSKL SISSRLSSRK QHKTTLYCHL 60
KTLLGKRFAS GSADKSVIIW TSKLEGILKY THNDSIQCVS YNPVTHQLAS CSSSDFGLWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGCCG TGCTGACGTG GAGAGATAAA GTCGAGCAGT GGTGAGGCGC GGGGCAGTCT 60
GGAGGAGCGG GGAGGGCGGA GCGCCTTCGG GGATGGCGGC AGCCGCGGCG GGAACCAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0036064--C:ciliary basal body
GO:0097546--C:ciliary base
GO:0005829--C:cytosol
GO:0030991--C:intraciliary transport particle A
GO:0016020--C:membrane
GO:0005654--C:nucleoplasm
GO:0032391--C:photoreceptor connecting cilium
GO:0048593--P:camera-type eye morphogenesis
GO:0060830--P:ciliary receptor clustering involved in smoothened signaling pathway
GO:0010172--P:embryonic body morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0035115--P:embryonic forelimb morphogenesis
GO:0060971--P:embryonic heart tube left/right pattern formation
GO:0072594--P:establishment of protein localization to organelle
GO:0035720--P:intraciliary anterograde transport
GO:0035721--P:intraciliary retrograde transport
GO:0050680--P:negative regulation of epithelial cell proliferation
GO:0021914--P:negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning
GO:0001843--P:neural tube closure
GO:1905515--P:non-motile cilium assembly
GO:0061512--P:protein localization to cilium
GO:0007227--P:signal transduction downstream of smoothened
GO:0060831--P:smoothened signaling pathway involved in dorsal/ventral neural tube patterning

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	93.25	0.00e+00	2326.00
IUUC-Apl-003504	Anas platyrhynchos	81.43	0.00e+00	2058.00
IUUC-Aca-004767	Anolis carolinensis	83.24	0.00e+00	2132.00
IUUC-Ame-011642	Astyanax mexicanus	73.12	0.00e+00	1881.00
IUUC-Bta-012969	Bos taurus	91.06	0.00e+00	2246.00
IUUC-Cel-018670	Caenorhabditis elegans	37.45	0.00e+00	882.00
IUUC-Cja-019249	Callithrix jacchus	85.36	0.00e+00	2115.00
IUUC-Cfa-020915	Canis familiaris	93.65	0.00e+00	2278.00
IUUC-Cpo-021888	Cavia porcellus	82.57	0.00e+00	2110.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	48.01	0.00e+00	1125.00
IUUC-Csa-023533	Chlorocebus sabaeus	90.10	0.00e+00	2247.00
IUUC-Cin-025121	Ciona intestinalis	57.35	0.00e+00	1514.00
IUUC-Csv-026240	Ciona savignyi	57.76	0.00e+00	1442.00
IUUC-Dno-029685	Dasypus novemcinctus	88.57	0.00e+00	2206.00
IUUC-Ete-032682	Echinops telfairi	83.27	0.00e+00	1687.00
IUUC-Eca-033831	Equus caballus	93.88	0.00e+00	2363.00
IUUC-Eeu-034919	Erinaceus europaeus	86.68	0.00e+00	1029.00
IUUC-Fca-036559	Felis catus	92.75	0.00e+00	2322.00
IUUC-Fal-037340	Ficedula albicollis	79.11	0.00e+00	1998.00
IUUC-Gga-040595	Gallus gallus	74.94	0.00e+00	1899.00
IUUC-Gac-041560	Gasterosteus aculeatus	20.75	1.00e-07	52.80
IUUC-Ggo-045356	Gorilla gorilla	85.98	0.00e+00	2205.00
IUUC-Hsa-046135	Homo sapiens	85.92	0.00e+00	2206.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	80.20	0.00e+00	1940.00
IUUC-Lch-050183	Latimeria chalumnae	82.18	0.00e+00	1193.00
IUUC-Loc-052049	Lepisosteus oculatus	78.29	0.00e+00	2000.00
IUUC-Laf-053728	Loxodonta africana	92.28	0.00e+00	2337.00
IUUC-Mcc-054971	Macaca mulatta	87.15	0.00e+00	2227.00
IUUC-Meu-056446	Macropus eugenii	83.14	0.00e+00	2148.00
IUUC-Mga-059296	Meleagris gallopavo	79.43	0.00e+00	2088.00
IUUC-Mmr-061232	Microcebus murinus	89.57	0.00e+00	2253.00
IUUC-Mdo-062115	Monodelphis domestica	90.81	0.00e+00	2301.00
IUUC-Mmu-063664	Mus musculus	90.82	0.00e+00	2329.00
IUUC-Mpu-066136	Mustela putorius furo	89.64	0.00e+00	2254.00
IUUC-Mlu-068238	Myotis lucifugus	90.73	0.00e+00	2305.00
IUUC-Nle-069003	Nomascus leucogenys	86.27	0.00e+00	2105.00
IUUC-Ont-072080	Oreochromis niloticus	74.07	0.00e+00	1936.00
IUUC-Oan-072891	Ornithorhynchus anatinus	81.92	0.00e+00	919.00
IUUC-Ola-086538	Oryzias latipes	71.50	0.00e+00	1835.00
IUUC-Oga-088722	Otolemur garnettii	88.24	0.00e+00	2187.00
IUUC-Oar-089249	Ovis aries	86.23	0.00e+00	2141.00
IUUC-Ptr-090752	Pan troglodytes	84.30	0.00e+00	2143.00
IUUC-Pan-092472	Papio anubis	90.19	0.00e+00	2254.00
IUUC-Psi-093335	Pelodiscus sinensis	82.05	0.00e+00	2076.00
IUUC-Pma-094520	Petromyzon marinus	70.60	0.00e+00	1511.00
IUUC-Ppa-095600	Physcomitrella patens	52.21	1.00e-28	118.00
IUUC-Pfo-096526	Poecilia formosa	71.21	0.00e+00	1804.00
IUUC-Pab-098428	Pongo abelii	76.97	0.00e+00	1833.00
IUUC-Pca-100233	Procavia capensis	70.96	0.00e+00	984.00
IUUC-Pva-103064	Pteropus vampyrus	81.35	0.00e+00	2018.00
IUUC-Rno-105764	Rattus norvegicus	91.22	0.00e+00	2318.00
IUUC-Sha-106649	Sarcophilus harrisii	90.56	0.00e+00	2288.00
IUUC-Smo-109287	Selaginella moellendorffii	39.09	0.00e+00	862.00
IUUC-Tgu-116870	Taeniopygia guttata	82.21	0.00e+00	2036.00
IUUC-Tru-118661	Takifugu rubripes	70.08	0.00e+00	1803.00
IUUC-Tsy-119640	Tarsius syrichta	75.75	0.00e+00	658.00
IUUC-Tni-120812	Tetraodon nigroviridis	71.35	0.00e+00	1805.00
IUUC-Ttr-128862	Tursiops truncatus	89.00	0.00e+00	2291.00
IUUC-Vpa-130049	Vicugna pacos	85.29	1.00e-157	550.00
IUUC-Xtr-131914	Xenopus tropicalis	76.83	0.00e+00	1951.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence