iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-110978

Ensembl Protein ID

Solyc06g072570.2.1

UniProt Accession

Q43780; Q43780_SOLLC

Genbank Protein ID

CAA58111.1

Protein Name

Ubiquitin conjugating enzyme

Genbank Nucleotide ID

X82938

Gene Name

LeUBC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g072570.2	Solyc06g072570.2.1	Solyc06g072570.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.00e-40	139.4	6	141
UBD/Alpha-Helix/UBA	3.10e-11	43.8	158	193

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    Rlkkelkelekdpp.egisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkee 89
           R++kel+e ++d + +gi ++++ +  lt++  +i Gp +tpYegg+Fk++i++++ YPf+PPk+kf tk++hPn++++ G++Cl+ilk  
   Q: 6    RVQKELHECNRDVQvSGINVTLKGD-SLTHLIGTIPGPVGTPYEGGTFKIDITLTDGYPFEPPKMKFATKVWHPNISSQsGAICLDILK-- 93
           89*******99865499********.6***************************************************99********9.. PP
   S: 90   ekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkv 137
           ++Wspal++++ llsiq+ll+ p+p++p+++ +a+++ ++++++  ++
   Q: 94   DQWSPALTLKTALLSIQALLSAPEPDDPQDAVVAQQYLREHQTFVGTA 141
           ***************************************999998776 PP

UBD/Alpha-Helix/UBA

   S: 5    dkleqlveMGFdreealqaLraannnleaAveyLld 40
           dk+++lveMGF++ +++  L+a++++ ++A+e Ll+
   Q: 158  DKIQKLVEMGFPEAQVRSTLEANGWDENMALEKLLS 193
           89********************************97 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVDLARVQKE LHECNRDVQV SGINVTLKGD SLTHLIGTIP GPVGTPYEGG TFKIDITLTD 60
GYPFEPPKMK FATKVWHPNI SSQSGAICLD ILKDQWSPAL TLKTALLSIQ ALLSAPEPDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTTCTCAG CCCATCTTCC AACAAAAAGC AGTGGCGACT TTTGCATAAA CCAAAATTAG 60
AATCAAATTG GAAGAGAGAA AAAAAAATGG TGGACTTGGC TAGGGTTCAA AAGGAGCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR015940--UBA
IPR009060--UBA-like
IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50030--UBA
PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00627--UBA
PF00179--UQ_con

SMART

SM00165--UBA

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

sly:544292

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000621	Aegilops tauschii	51.06	2.00e-58	217.00
IUUC-Aml-001286	Ailuropoda melanoleuca	48.22	4.00e-44	169.00
IUUC-Atr-003063	Amborella trichopoda	73.30	2.00e-70	256.00
IUUC-Apl-004122	Anas platyrhynchos	52.30	1.00e-42	164.00
IUUC-Aca-004565	Anolis carolinensis	52.30	9.00e-43	165.00
IUUC-Aly-006390	Arabidopsis lyrata	74.09	1.00e-85	307.00
IUUC-Ath-006637	Arabidopsis thaliana	69.27	8.00e-83	298.00
IUUC-Ago-007714	Ashbya gossypii	45.97	9.00e-44	169.00
IUUC-Acl-008189	Aspergillus clavatus	56.16	3.00e-26	111.00
IUUC-Afl-008489	Aspergillus flavus	57.53	2.00e-27	114.00
IUUC-Afu-008850	Aspergillus fumigatus	56.12	2.00e-28	118.00
IUUC-Ani-009361	Aspergillus nidulans	56.64	1.00e-27	115.00
IUUC-Ang-009548	Aspergillus niger	57.24	1.00e-27	115.00
IUUC-Aor-010105	Aspergillus oryzae	57.53	2.00e-27	114.00
IUUC-Ate-010389	Aspergillus terreus	53.79	3.00e-27	114.00
IUUC-Ame-011454	Astyanax mexicanus	48.73	1.00e-44	171.00
IUUC-Bgr-012255	Blumeria graminis	50.68	2.00e-33	135.00
IUUC-Bta-012992	Bos taurus	48.22	4.00e-44	169.00
IUUC-Bci-013806	Botrytis cinerea	50.68	8.00e-34	136.00
IUUC-Bdi-015024	Brachypodium distachyon	72.45	9.00e-70	255.00
IUUC-Bol-015985	Brassica oleracea	72.54	7.00e-85	305.00
IUUC-Bra-016805	Brassica rapa	72.54	5.00e-85	305.00
IUUC-Cel-018353	Caenorhabditis elegans	48.47	3.00e-52	197.00
IUUC-Cja-019051	Callithrix jacchus	48.22	3.00e-44	170.00
IUUC-Cfa-020016	Canis familiaris	48.22	4.00e-44	169.00
IUUC-Cpo-022026	Cavia porcellus	48.22	4.00e-44	169.00
IUUC-Cre-022987	Chlamydomonas reinhardtii	65.62	2.00e-58	217.00
IUUC-Csa-023059	Chlorocebus sabaeus	48.22	4.00e-44	169.00
IUUC-Cin-025598	Ciona intestinalis	51.83	9.00e-43	165.00
IUUC-Csv-025831	Ciona savignyi	49.21	3.00e-41	160.00
IUUC-Cgl-026449	Colletotrichum gloeosporioides	49.29	2.00e-36	144.00
IUUC-Cne-027068	Cryptococcus neoformans	45.79	6.00e-50	189.00
IUUC-Dre-028139	Danio rerio	48.73	1.00e-44	171.00
IUUC-Dno-029169	Dasypus novemcinctus	50.55	7.00e-43	166.00
IUUC-Dse-031335	Dothistroma septosporum	54.17	1.00e-41	162.00
IUUC-Dme-032003	Drosophila melanogaster	47.94	6.00e-45	172.00
IUUC-Eca-033428	Equus caballus	48.22	4.00e-44	169.00
IUUC-Fca-035366	Felis catus	48.22	4.00e-44	169.00
IUUC-Fal-037016	Ficedula albicollis	48.22	4.00e-44	169.00
IUUC-Fox-037969	Fusarium oxysporum	40.49	3.00e-40	157.00
IUUC-Fso-038296	Fusarium solani	51.43	3.00e-37	147.00
IUUC-Gmo-039135	Gadus morhua	48.73	3.00e-44	170.00
IUUC-Ggr-039768	Gaeumannomyces graminis	50.34	1.00e-30	125.00
IUUC-Gga-041018	Gallus gallus	48.22	5.00e-44	169.00
IUUC-Gac-041503	Gasterosteus aculeatus	48.73	1.00e-44	171.00
IUUC-Gma-043630	Glycine max	80.73	2.00e-91	326.00
IUUC-Ggo-045032	Gorilla gorilla	48.22	4.00e-44	169.00
IUUC-Hsa-046490	Homo sapiens	48.22	4.00e-44	169.00
IUUC-Hvu-047691	Hordeum vulgare	65.99	4.00e-29	120.00
IUUC-Itr-048373	Ictidomys tridecemlineatus	48.22	4.00e-44	169.00
IUUC-Kpa-049297	Komagataella pastoris	50.67	3.00e-36	144.00
IUUC-Lch-050588	Latimeria chalumnae	55.41	5.00e-46	176.00
IUUC-Lpe-051070	Leersia perrieri	73.85	3.00e-63	233.00
IUUC-Loc-052549	Lepisosteus oculatus	48.73	3.00e-44	170.00
IUUC-Lma-052949	Leptosphaeria maculans	55.48	5.00e-42	163.00
IUUC-Laf-053688	Loxodonta africana	48.48	6.00e-43	166.00
IUUC-Mcc-055606	Macaca mulatta	48.22	4.00e-44	169.00
IUUC-Mor-056946	Magnaporthe oryzae	51.02	2.00e-29	121.00
IUUC-Mpo-057441	Magnaporthe poae	49.66	4.00e-30	123.00
IUUC-Mtr-058002	Medicago truncatula	78.65	4.00e-91	326.00
IUUC-Mla-059007	Melampsora laricipopulina	47.37	7.00e-53	199.00
IUUC-Mga-059254	Meleagris gallopavo	52.30	1.00e-42	164.00
IUUC-Mvi-060346	Microbotryum violaceum	44.13	8.00e-48	182.00
IUUC-Mmr-061211	Microcebus murinus	48.22	4.00e-44	169.00
IUUC-Mdo-062458	Monodelphis domestica	47.72	5.00e-42	162.00
IUUC-Mmu-063648	Mus musculus	48.22	4.00e-44	169.00
IUUC-Mac-065447	Musa acuminata	73.47	9.00e-75	271.00
IUUC-Mpu-066407	Mustela putorius furo	48.22	2.00e-43	168.00
IUUC-Mlu-067682	Myotis lucifugus	52.30	1.00e-42	165.00
IUUC-Nfi-068517	Neosartorya fischeri	56.12	2.00e-28	118.00
IUUC-Ncr-068749	Neurospora crassa	39.51	9.00e-38	149.00
IUUC-Nle-069712	Nomascus leucogenys	52.30	2.00e-42	164.00
IUUC-Opr-070651	Ochotona princeps	48.22	4.00e-44	169.00
IUUC-Ont-071433	Oreochromis niloticus	48.73	3.00e-45	173.00
IUUC-Oan-073058	Ornithorhynchus anatinus	52.70	5.00e-36	142.00
IUUC-Ocu-074939	Oryctolagus cuniculus	48.22	4.00e-44	169.00
IUUC-Oba-075530	Oryza barthii	74.23	4.00e-63	233.00
IUUC-Obr-076838	Oryza brachyantha	73.71	6.00e-63	232.00
IUUC-Ogl-077606	Oryza glaberrima	74.23	4.00e-63	233.00
IUUC-Ogu-078238	Oryza glumaepatula	74.23	4.00e-63	233.00
IUUC-Oin-079643	Oryza indica	74.23	6.00e-63	232.00
IUUC-Ome-081274	Oryza meridionalis	74.23	4.00e-63	233.00
IUUC-Oni-082651	Oryza nivara	74.23	4.00e-63	233.00
IUUC-Opu-083933	Oryza punctata	74.23	2.00e-63	233.00
IUUC-Oru-085054	Oryza rufipogon	74.74	2.00e-63	234.00
IUUC-Osa-085716	Oryza sativa	74.23	6.00e-63	232.00
IUUC-Ola-087278	Oryzias latipes	48.22	9.00e-45	172.00
IUUC-Olu-087846	Ostreococcus lucimarinus	59.38	1.00e-59	221.00
IUUC-Oga-088897	Otolemur garnettii	52.30	1.00e-42	165.00
IUUC-Oar-089673	Ovis aries	48.96	7.00e-43	165.00
IUUC-Ptr-091295	Pan troglodytes	48.22	4.00e-44	169.00
IUUC-Pan-092034	Papio anubis	52.30	2.00e-42	164.00
IUUC-Psi-093498	Pelodiscus sinensis	48.22	4.00e-44	169.00
IUUC-Pma-094115	Petromyzon marinus	50.25	2.00e-48	184.00
IUUC-Pno-095102	Phaeosphaeria nodorum	55.63	7.00e-42	162.00
IUUC-Ppa-095326	Physcomitrella patens	68.04	4.00e-65	239.00
IUUC-Pfo-096940	Poecilia formosa	48.73	3.00e-45	173.00
IUUC-Pab-098279	Pongo abelii	48.22	4.00e-44	169.00
IUUC-Pop-099543	Populus trichocarpa	80.31	1.00e-92	330.00
IUUC-Pca-100782	Procavia capensis	48.22	9.00e-43	165.00
IUUC-Ppe-101789	Prunus persica	81.44	5.00e-84	303.00
IUUC-Pgr-103643	Puccinia graminis	58.78	6.00e-51	193.00
IUUC-Ptt-103772	Puccinia triticina	58.04	2.00e-49	187.00
IUUC-Pte-104370	Pyrenophora teres	54.79	1.00e-40	158.00
IUUC-Pyt-104592	Pyrenophora triticirepentis	54.79	2.00e-40	158.00
IUUC-Rno-104984	Rattus norvegicus	48.22	4.00e-44	169.00
IUUC-Sce-106394	Saccharomyces cerevisiae	45.31	2.00e-37	147.00
IUUC-Sha-106721	Sarcophilus harrisii	47.21	8.00e-44	169.00
IUUC-Sja-107866	Schizosaccharomyces japonicus	51.30	3.00e-50	190.00
IUUC-Spo-108209	Schizosaccharomyces pombe	48.92	3.00e-47	180.00
IUUC-Ssl-108609	Sclerotinia sclerotiorum	52.45	7.00e-34	136.00
IUUC-Smo-109656	Selaginella moellendorffii	67.36	7.00e-65	238.00
IUUC-Sit-110639	Setaria italica	72.68	1.00e-69	254.00
IUUC-Stu-112088	Solanum tuberosum	98.97	3.00e-113	399.00
IUUC-Sbi-113986	Sorghum bicolor	72.68	2.00e-69	254.00
IUUC-Sre-115046	Sporisorium reilianum	59.87	4.00e-53	200.00
IUUC-Ssc-116314	Sus scrofa	48.22	4.00e-44	169.00
IUUC-Tgu-117427	Taeniopygia guttata	52.30	1.00e-42	164.00
IUUC-Tru-118618	Takifugu rubripes	49.24	6.00e-46	176.00
IUUC-Tsy-119208	Tarsius syrichta	47.72	9.00e-44	169.00
IUUC-Tni-120673	Tetraodon nigroviridis	49.00	2.00e-50	190.00
IUUC-Tca-121446	Theobroma cacao	79.38	3.00e-91	326.00
IUUC-Tre-122053	Trichoderma reesei	48.39	2.00e-37	148.00
IUUC-Tvi-122533	Trichoderma virens	51.06	1.00e-37	149.00
IUUC-Tae-124726	Triticum aestivum	73.33	1.00e-61	228.00
IUUC-Tme-127024	Tuber melanosporum	56.00	2.00e-44	171.00
IUUC-Tbe-127752	Tupaia belangeri	48.72	3.00e-43	167.00
IUUC-Ttr-128287	Tursiops truncatus	52.30	1.00e-42	164.00
IUUC-Uma-129512	Ustilago maydis	61.18	2.00e-54	204.00
IUUC-Vda-129947	Verticillium dahliae	51.03	1.00e-36	145.00
IUUC-Vpa-130481	Vicugna pacos	48.22	5.00e-44	169.00
IUUC-Vvi-131429	Vitis vinifera	81.15	2.00e-91	327.00
IUUC-Xma-134308	Xiphophorus maculatus	48.22	1.00e-44	171.00
IUUC-Yli-134523	Yarrowia lipolytica	42.18	2.00e-38	150.00
IUUC-Zma-135733	Zea mays	68.45	4.00e-67	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence