iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005702

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348715

Gene Name

NIP2; ARALYDRAFT_900123

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_304093.1	scaffold_304093.1	scaffold_304093.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.40e-06	28.2	194	236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++lp C H+fh+ C+ +w        ++ +CP Cr
   Q: 194  CSVCLQDFqlgET-VRSLPhCHHMFHLPCIDNW------LLRHGSCPMCR 236
           ********88555.*******************......999999****8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASSSSYRFQ SGFCPLSSSP SLGNFVERIK DACHFLVSAV LGTIISAILT FFFALVGTLL 60
GALTGALIGQ ETESGFIRGA AIGAISGAVF SIEVFESSLD LWKSDESGFG CFLYLIDVIV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTCTGGGT TCTTAAGAAA AACATGGCCT CATCATCATC TTATAGATTC CAATCTGGGT 60
TTTGTCCTCT TTCGTCAAGT CCTTCTCTTG GGAATTTCGT CGAACGAATT AAAGACGCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR027367--Gly-zipper_YMGG
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13441--Gly-zipper_YMGG
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_900123

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000505	Aegilops tauschii	54.69	4.00e-59	220.00
IUUC-Ath-006697	Arabidopsis thaliana	97.31	2.00e-93	333.00
IUUC-Bol-015847	Brassica oleracea	89.50	5.00e-106	376.00
IUUC-Bra-017815	Brassica rapa	89.92	1.00e-101	361.00
IUUC-Hvu-047681	Hordeum vulgare	50.96	4.00e-51	193.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence