iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107664

Ensembl Protein ID

EEB07217

UniProt Accession

B6K236; B6K236_SCHJY

Genbank Protein ID

EEB07217.2

Protein Name

U3 snoRNA associted protein Dip2

Genbank Nucleotide ID

KE651166

Gene Name

SJAG_02300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_02300	EEB07217	EEB07217

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-43	142.7	625	653
UBD/Beta-Prp	4.30e-86	286.8	502	654

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH ++v+c+a  + t++vsGs+D++i+vW 
   Q: 625  GHHSEVWCIAVaP-TFVVSGSHDHSIRVWA 653
           8999*******98.9**************6 PP

UBD/Beta-Prp

   S: 10   ksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklv 110
           ++v++ vk spd++l+a++  d+t+kv+ ++t kl+  l+gh+ +v ++++  d+k+lvt+s D+++k+w l+ g+c  ++ +h+ds+++++f+p+++ + 
   Q: 502  DDVLS-VKLSPDGRLIAASLLDNTVKVYYLDTLKLFLNLYGHKLPVLSMDIAYDSKLLVTCSADKNVKLWGLDFGDCHKSIFAHQDSIMDVAFQPNSHNFF 601
           67777.9********************************************************************************************** PP
   S: 111  sGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl 166
           + s+d  +r wd ++   +   l+gh++ v+c++v p    +vsGs D  +r+W  
   Q: 602  TCSKDHEVRYWDGDSFDLIL-KLRGHHSEVWCIAVAP--TFVVSGSHDHSIRVWAE 654
           *******************9.9***************..9**************54 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MVKSYTRYEP LNNFGVVCSS TCNIITRRSE GSKSIGRCFV GALESVLEWD LKTGELLSKW 60
RDSDCSASAT AISSFGELFA VGYSDGSIRL WQKGSLQVTL NGHKNAVTAL QFNNDGTKLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAAA GCTATACTCG GTATGAGCCG TTAAACAACT TTGGAGTAGT CTGCTCCTCT 60
ACTTGTAACA TTATTACAAG ACGTTCTGAG GGATCAAAGT CAATTGGCAG ATGTTTCGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	34.24	3.00e-128	450.00
IUUC-Aml-001245	Ailuropoda melanoleuca	37.81	2.00e-156	544.00
IUUC-Atr-002700	Amborella trichopoda	34.96	3.00e-145	507.00
IUUC-Apl-004164	Anas platyrhynchos	38.92	1.00e-125	441.00
IUUC-Aca-004765	Anolis carolinensis	36.20	4.00e-153	533.00
IUUC-Aly-006503	Arabidopsis lyrata	35.22	9.00e-146	509.00
IUUC-Ath-006848	Arabidopsis thaliana	35.51	1.00e-150	525.00
IUUC-Ago-007909	Ashbya gossypii	41.95	0.00e+00	664.00
IUUC-Acl-008238	Aspergillus clavatus	43.23	0.00e+00	779.00
IUUC-Afl-008544	Aspergillus flavus	42.22	0.00e+00	751.00
IUUC-Afu-008868	Aspergillus fumigatus	43.36	0.00e+00	765.00
IUUC-Ani-009367	Aspergillus nidulans	41.18	0.00e+00	731.00
IUUC-Ang-009732	Aspergillus niger	42.50	0.00e+00	766.00
IUUC-Aor-010140	Aspergillus oryzae	42.55	0.00e+00	758.00
IUUC-Ate-010572	Aspergillus terreus	41.93	0.00e+00	734.00
IUUC-Ame-010956	Astyanax mexicanus	35.28	5.00e-142	496.00
IUUC-Bgr-012296	Blumeria graminis	42.71	0.00e+00	730.00
IUUC-Bta-012716	Bos taurus	39.02	1.00e-163	568.00
IUUC-Bci-013699	Botrytis cinerea	43.47	0.00e+00	721.00
IUUC-Bdi-014525	Brachypodium distachyon	34.61	4.00e-144	503.00
IUUC-Bol-015117	Brassica oleracea	36.56	3.00e-152	530.00
IUUC-Bra-016869	Brassica rapa	37.21	1.00e-152	531.00
IUUC-Cel-018570	Caenorhabditis elegans	27.55	7.00e-90	323.00
IUUC-Cja-019425	Callithrix jacchus	37.59	2.00e-165	573.00
IUUC-Cfa-020787	Canis familiaris	38.45	3.00e-161	560.00
IUUC-Cpo-021729	Cavia porcellus	38.84	3.00e-118	416.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	37.48	2.00e-77	281.00
IUUC-Csa-024098	Chlorocebus sabaeus	38.23	6.00e-167	579.00
IUUC-Cho-024495	Choloepus hoffmanni	38.27	6.00e-82	296.00
IUUC-Cin-025245	Ciona intestinalis	30.14	5.00e-82	296.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	43.57	0.00e+00	733.00
IUUC-Cne-026835	Cryptococcus neoformans	37.90	4.00e-161	560.00
IUUC-Cme-027162	Cyanidioschyzon merolae	26.83	3.00e-51	195.00
IUUC-Dre-027874	Danio rerio	36.79	1.00e-155	541.00
IUUC-Dno-028905	Dasypus novemcinctus	38.66	1.00e-159	555.00
IUUC-Dor-030383	Dipodomys ordii	32.86	2.00e-63	235.00
IUUC-Dse-031297	Dothistroma septosporum	41.58	0.00e+00	709.00
IUUC-Dme-031956	Drosophila melanogaster	30.79	9.00e-113	399.00
IUUC-Ete-032608	Echinops telfairi	33.52	2.00e-80	291.00
IUUC-Eca-034181	Equus caballus	37.49	2.00e-154	537.00
IUUC-Eeu-034495	Erinaceus europaeus	37.89	5.00e-150	523.00
IUUC-Fca-035994	Felis catus	37.63	3.00e-146	510.00
IUUC-Fal-036611	Ficedula albicollis	37.25	7.00e-153	532.00
IUUC-Fox-037807	Fusarium oxysporum	43.72	0.00e+00	738.00
IUUC-Fso-038090	Fusarium solani	45.54	0.00e+00	734.00
IUUC-Gmo-039018	Gadus morhua	30.52	8.00e-71	259.00
IUUC-Ggr-039748	Gaeumannomyces graminis	44.90	0.00e+00	765.00
IUUC-Gga-040707	Gallus gallus	39.15	2.00e-156	544.00
IUUC-Gac-042334	Gasterosteus aculeatus	30.30	2.00e-62	232.00
IUUC-Gma-043860	Glycine max	35.74	2.00e-144	504.00
IUUC-Ggo-045334	Gorilla gorilla	38.02	1.00e-164	571.00
IUUC-Hsa-046996	Homo sapiens	38.02	1.00e-163	568.00
IUUC-Hvu-047381	Hordeum vulgare	32.38	2.00e-74	271.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	36.85	3.00e-153	534.00
IUUC-Kpa-049185	Komagataella pastoris	41.61	0.00e+00	668.00
IUUC-Lch-050098	Latimeria chalumnae	34.14	5.00e-134	469.00
IUUC-Lpe-050710	Leersia perrieri	34.68	7.00e-139	486.00
IUUC-Loc-052745	Lepisosteus oculatus	34.22	2.00e-142	498.00
IUUC-Lma-053104	Leptosphaeria maculans	43.35	0.00e+00	727.00
IUUC-Laf-054395	Loxodonta africana	37.91	8.00e-160	555.00
IUUC-Mcc-055077	Macaca mulatta	38.34	4.00e-165	573.00
IUUC-Meu-056418	Macropus eugenii	41.57	3.00e-86	311.00
IUUC-Mor-057031	Magnaporthe oryzae	44.48	0.00e+00	680.00
IUUC-Mpo-057420	Magnaporthe poae	44.91	0.00e+00	741.00
IUUC-Mtr-057838	Medicago truncatula	35.50	3.00e-150	523.00
IUUC-Mla-058854	Melampsora laricipopulina	37.59	3.00e-158	550.00
IUUC-Mga-060120	Meleagris gallopavo	39.57	2.00e-110	392.00
IUUC-Mvi-060407	Microbotryum violaceum	41.50	2.00e-132	464.00
IUUC-Mmr-060635	Microcebus murinus	38.26	3.00e-158	550.00
IUUC-Mdo-063023	Monodelphis domestica	37.70	4.00e-160	556.00
IUUC-Mmu-064103	Mus musculus	38.32	7.00e-164	569.00
IUUC-Mac-065569	Musa acuminata	35.26	3.00e-144	503.00
IUUC-Mpu-066462	Mustela putorius furo	38.06	1.00e-159	555.00
IUUC-Mlu-067894	Myotis lucifugus	38.17	4.00e-160	556.00
IUUC-Nfi-068321	Neosartorya fischeri	43.02	0.00e+00	760.00
IUUC-Ncr-068661	Neurospora crassa	43.27	0.00e+00	741.00
IUUC-Nle-069409	Nomascus leucogenys	38.23	2.00e-167	581.00
IUUC-Opr-070445	Ochotona princeps	40.18	2.00e-102	364.00
IUUC-Ont-072339	Oreochromis niloticus	36.51	2.00e-152	531.00
IUUC-Oan-073688	Ornithorhynchus anatinus	35.53	5.00e-141	493.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.70	9.00e-160	555.00
IUUC-Oba-075635	Oryza barthii	33.26	2.00e-129	454.00
IUUC-Obr-076897	Oryza brachyantha	35.17	4.00e-144	503.00
IUUC-Ogl-077555	Oryza glaberrima	33.26	2.00e-129	454.00
IUUC-Ogu-078724	Oryza glumaepatula	33.82	3.00e-131	461.00
IUUC-Oin-080030	Oryza indica	33.12	4.00e-130	457.00
IUUC-Olo-080687	Oryza longistaminata	31.00	3.00e-117	414.00
IUUC-Ome-081867	Oryza meridionalis	33.40	3.00e-130	457.00
IUUC-Oni-082559	Oryza nivara	33.12	1.00e-129	455.00
IUUC-Opu-083332	Oryza punctata	36.10	7.00e-122	429.00
IUUC-Oru-084455	Oryza rufipogon	33.23	6.00e-131	459.00
IUUC-Osa-085793	Oryza sativa	33.23	6.00e-131	459.00
IUUC-Ola-087395	Oryzias latipes	35.55	1.00e-143	501.00
IUUC-Olu-087768	Ostreococcus lucimarinus	33.06	9.00e-126	442.00
IUUC-Oga-088574	Otolemur garnettii	37.81	5.00e-157	546.00
IUUC-Oar-089453	Ovis aries	38.58	2.00e-162	564.00
IUUC-Ptr-090694	Pan troglodytes	38.13	1.00e-164	572.00
IUUC-Pan-092420	Papio anubis	38.23	4.00e-165	573.00
IUUC-Psi-093683	Pelodiscus sinensis	37.43	1.00e-151	528.00
IUUC-Pma-094197	Petromyzon marinus	38.33	2.00e-40	156.00
IUUC-Pno-094783	Phaeosphaeria nodorum	41.45	0.00e+00	712.00
IUUC-Ppa-095208	Physcomitrella patens	34.68	5.00e-144	503.00
IUUC-Pfo-096299	Poecilia formosa	36.32	5.00e-160	556.00
IUUC-Pab-098706	Pongo abelii	38.49	3.00e-167	580.00
IUUC-Pop-099275	Populus trichocarpa	35.84	1.00e-143	501.00
IUUC-Pca-100796	Procavia capensis	31.86	2.00e-96	344.00
IUUC-Ppe-101861	Prunus persica	37.25	1.00e-150	525.00
IUUC-Pva-103241	Pteropus vampyrus	36.43	2.00e-145	507.00
IUUC-Pgr-103432	Puccinia graminis	36.14	1.00e-154	538.00
IUUC-Ptt-103742	Puccinia triticina	33.17	3.00e-135	474.00
IUUC-Pte-104069	Pyrenophora teres	42.00	0.00e+00	686.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	41.77	0.00e+00	710.00
IUUC-Rno-105219	Rattus norvegicus	37.63	1.00e-158	551.00
IUUC-Sce-106271	Saccharomyces cerevisiae	41.55	0.00e+00	679.00
IUUC-Sha-107550	Sarcophilus harrisii	38.17	1.00e-159	555.00
IUUC-Spo-108239	Schizosaccharomyces pombe	65.84	0.00e+00	1248.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	44.00	0.00e+00	751.00
IUUC-Smo-108974	Selaginella moellendorffii	35.21	4.00e-146	510.00
IUUC-Sit-110000	Setaria italica	36.17	8.00e-139	486.00
IUUC-Sly-111595	Solanum lycopersicum	36.39	2.00e-148	518.00
IUUC-Stu-112516	Solanum tuberosum	37.37	5.00e-146	509.00
IUUC-Sar-113195	Sorex araneus	40.67	3.00e-100	357.00
IUUC-Sbi-114465	Sorghum bicolor	35.73	3.00e-143	500.00
IUUC-Sre-115006	Sporisorium reilianum	37.08	1.00e-164	571.00
IUUC-Ssc-115929	Sus scrofa	37.91	2.00e-157	548.00
IUUC-Tgu-117282	Taeniopygia guttata	35.97	2.00e-149	521.00
IUUC-Tru-118406	Takifugu rubripes	35.71	7.00e-148	516.00
IUUC-Tsy-119170	Tarsius syrichta	37.19	6.00e-155	539.00
IUUC-Tni-119721	Tetraodon nigroviridis	34.97	5.00e-143	499.00
IUUC-Tca-121761	Theobroma cacao	36.92	8.00e-156	542.00
IUUC-Tre-121908	Trichoderma reesei	44.55	0.00e+00	722.00
IUUC-Tvi-122547	Trichoderma virens	44.69	0.00e+00	719.00
IUUC-Tae-125496	Triticum aestivum	34.91	3.00e-140	490.00
IUUC-Tur-126811	Triticum urartu	35.14	4.00e-139	486.00
IUUC-Tme-126987	Tuber melanosporum	44.49	0.00e+00	792.00
IUUC-Tbe-127315	Tupaia belangeri	42.60	1.00e-88	318.00
IUUC-Ttr-129165	Tursiops truncatus	42.34	6.00e-63	234.00
IUUC-Uma-129651	Ustilago maydis	35.99	2.00e-163	567.00
IUUC-Vda-129973	Verticillium dahliae	44.94	0.00e+00	738.00
IUUC-Vpa-130163	Vicugna pacos	32.81	6.00e-55	207.00
IUUC-Vvi-131402	Vitis vinifera	35.86	2.00e-149	521.00
IUUC-Xtr-132296	Xenopus tropicalis	37.11	9.00e-152	528.00
IUUC-Xma-133028	Xiphophorus maculatus	36.65	2.00e-158	550.00
IUUC-Yli-134484	Yarrowia lipolytica	43.75	0.00e+00	710.00
IUUC-Zma-135938	Zea mays	34.85	5.00e-142	496.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence