iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099732

Ensembl Protein ID

POPTR_0016s09020.1

UniProt Accession

B9IFM3; B9IFM3_POPTR

Genbank Protein ID

EEF04634.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_904302; POPTR_0016s09020g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s09020	POPTR_0016s09020.1	POPTR_0016s09020.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-16	59.5	310	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           ++s++++af ++  +l++ ++Dg ++v+D+++
   Q: 310  QGSINGIAFsNEgAYLATVGRDGYLRVFDYSK 341
           579******98899***************765 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MINSSNGMIS TSSTSANTQS PGLKTYFKTP EGRYKLHYEK THPSGLLHYA HGKTVTQVTL 60
AIIKDKPAPS TPMAPPSGFS TGSGVRSAAA RLLGASNGSR ALSFVGGNGG SKSISSSSSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACTACAAG AAATTTGTTT TACTTCGTTG ATTTTTTTGG AGAAAGAAAA GAGTGACCAA 60
ACCCTAGTGT CATGATCAGA TGCTTTAAGG TTTACAGTAA TCGAAGGCAA GACCAGCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0016579--P:protein deubiquitination

KEGG

pop:POPTR_0016s09020g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Afu-008994	Aspergillus fumigatus	33.17	1.00e-50	193.00
IUUC-Bra-017842	Brassica rapa	64.39	0.00e+00	652.00
IUUC-Dse-031362	Dothistroma septosporum	32.54	5.00e-57	215.00
IUUC-Gma-044186	Glycine max	80.88	0.00e+00	831.00
IUUC-Hvu-047057	Hordeum vulgare	59.76	1.00e-104	372.00
IUUC-Lpe-051378	Leersia perrieri	68.37	0.00e+00	655.00
IUUC-Mtr-058649	Medicago truncatula	78.04	0.00e+00	801.00
IUUC-Mmr-060982	Microcebus murinus	34.05	9.00e-50	191.00
IUUC-Mac-064899	Musa acuminata	69.48	0.00e+00	729.00
IUUC-Nfi-068256	Neosartorya fischeri	33.01	3.00e-56	212.00
IUUC-Oba-075876	Oryza barthii	64.30	4.00e-174	603.00
IUUC-Obr-076346	Oryza brachyantha	68.25	0.00e+00	650.00
IUUC-Ogl-077048	Oryza glaberrima	68.50	0.00e+00	661.00
IUUC-Ogu-078225	Oryza glumaepatula	67.51	0.00e+00	654.00
IUUC-Oin-079605	Oryza indica	68.70	0.00e+00	662.00
IUUC-Oni-082472	Oryza nivara	67.51	0.00e+00	654.00
IUUC-Opu-083440	Oryza punctata	66.54	0.00e+00	659.00
IUUC-Oru-084205	Oryza rufipogon	64.30	7.00e-174	603.00
IUUC-Osa-086186	Oryza sativa	68.70	0.00e+00	662.00
IUUC-Ppa-095812	Physcomitrella patens	59.31	7.00e-174	603.00
IUUC-Smo-108846	Selaginella moellendorffii	64.86	0.00e+00	645.00
IUUC-Sly-111266	Solanum lycopersicum	75.65	0.00e+00	800.00
IUUC-Stu-112818	Solanum tuberosum	79.73	0.00e+00	788.00
IUUC-Sbi-113976	Sorghum bicolor	65.97	0.00e+00	633.00
IUUC-Tvi-122377	Trichoderma virens	32.73	7.00e-49	187.00
IUUC-Tur-126428	Triticum urartu	56.21	3.00e-114	404.00
IUUC-Vvi-130973	Vitis vinifera	80.82	0.00e+00	860.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence