iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-002308

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01131434

Gene Name

TRIM4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000014395.1	ENSAMET00000015804.1	ENSAMEP00000015181.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.90e-07	30.6	12	47

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw.......p 30
           C+iCl+ f+d p++  CgH f++ Cl ++       p
   Q: 12   CSICLDYFDD-PVSIECGHNFCRGCLTRYcevpgpsP 47
           **********.******************77654441 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MEAEDLQEDL TCSICLDYFD DPVSIECGHN FCRGCLTRYC EVPGPSPRRP WPARSECDRH 60
REALRLFCED DQRPVCLVCR ESREHQAHTM TPIDEAFYSY REKLLKAQCS LKDKMKKAIY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCCG AGGACCTGCA GGAGGACCTG ACCTGCTCTA TCTGCCTGGA CTATTTCGAC 60
GACCCGGTGT CCATCGAGTG TGGCCACAAC TTCTGCCGCG GCTGCCTCAC CCGCTACTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001870--B30.2/SPRY
IPR003879--Butyrophylin
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50188--B302_SPRY
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00622--SPRY
PF00643--zf-B_box

PRINTS

PR01407--BUTYPHLNCDUF

SMART

SM00336--BBOX
SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0005829--C:cytosol
GO:0005886--C:plasma membrane
GO:0008270--F:zinc ion binding
GO:0070206--P:protein trimerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cja-019204	Callithrix jacchus	59.88	2.00e-151	528.00
IUUC-Cfa-021283	Canis familiaris	73.68	0.00e+00	666.00
IUUC-Csa-023476	Chlorocebus sabaeus	66.24	1.00e-167	582.00
IUUC-Cho-024657	Choloepus hoffmanni	56.87	2.00e-135	475.00
IUUC-Cne-027043	Cryptococcus neoformans	43.59	2.00e-06	47.00
IUUC-Eca-033740	Equus caballus	72.70	2.00e-140	491.00
IUUC-Hsa-046707	Homo sapiens	63.40	2.00e-164	572.00
IUUC-Mcc-055643	Macaca mulatta	63.82	2.00e-164	572.00
IUUC-Mmr-061318	Microcebus murinus	64.00	5.00e-168	583.00
IUUC-Mpu-066377	Mustela putorius furo	76.00	0.00e+00	642.00
IUUC-Mlu-067319	Myotis lucifugus	71.59	1.00e-132	466.00
IUUC-Nle-069382	Nomascus leucogenys	68.77	4.00e-125	441.00
IUUC-Opr-070278	Ochotona princeps	55.02	1.00e-137	483.00
IUUC-Oga-088830	Otolemur garnettii	57.93	2.00e-127	448.00
IUUC-Oar-089188	Ovis aries	66.39	7.00e-171	593.00
IUUC-Pan-092332	Papio anubis	63.31	6.00e-164	570.00
IUUC-Pab-097648	Pongo abelii	66.67	4.00e-167	580.00
IUUC-Pva-102131	Pteropus vampyrus	64.26	6.00e-165	573.00
IUUC-Ssc-116309	Sus scrofa	61.11	1.00e-151	529.00
IUUC-Tsy-119365	Tarsius syrichta	65.41	1.00e-109	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence