iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000003672.2	ENSCJAT00000007031.2	ENSCJAP00000006660.2
ENSCJAG00000003672.2	ENSCJAT00000007057.1	ENSCJAP00000006684.1
ENSCJAG00000003672.2	ENSCJAT00000007024.2	ENSCJAP00000006653.2
ENSCJAG00000003672.2	ENSCJAT00000007064.2	ENSCJAP00000006691.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	33.96	2.80e+00	29.60	IUUC-Sce-106433

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MDLLSGTYIF AVLLACVVFQ SGAQEKNYTI REEMPENVLI GDLLKDLNLS LVLDKSLKSP 60
MQFKLVYKTG DVPLIRIEEG TGEIFTTGAR IDREKLCAGI SMDTECFYEV EVAVLPDEIF 120

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Nucleotide Sequence
(Fasta)

TTACTTCTCT CCCCACGCCT TTCACTGGTT CACCCCCCTT CCTTCCCCTT CTCCCCCTCT 60
GTGAAGTCCC TCCCCCTCGC CATTGAAAAG GGCTGGCTCG GCACTGGCTC CTTGCAGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0106--Calcium
KW-0130--Cell adhesion
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002126--Cadherin
IPR015919--Cadherin-like
IPR020894--Cadherin_CS
IPR013164--Cadherin_N
IPR023226--Glyco_hydro_49_N_dom
IPR013585--Protocadherin

PROSITE

PS00232--CADHERIN_1
PS50268--CADHERIN_2

Pfam

PF00028--Cadherin
PF08266--Cadherin_2
PF08374--Protocadherin

PRINTS

PR00205--CADHERIN

SMART

SM00112--CA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0005509--F:calcium ion binding
GO:0007156--P:homophilic cell adhesion via plasma membrane adhesion molecules

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Csa-023490	Chlorocebus sabaeus	38.30	4.10e-01	29.60
IUUC-Cho-024956	Choloepus hoffmanni	29.24	1.00e-40	164.00
IUUC-Cin-025603	Ciona intestinalis	29.52	2.00e-14	74.30
IUUC-Itr-048244	Ictidomys tridecemlineatus	32.31	2.00e-65	245.00
IUUC-Mmr-061467	Microcebus murinus	28.81	3.00e-66	248.00
IUUC-Rno-105000	Rattus norvegicus	33.18	1.00e-82	301.00
IUUC-Sha-107415	Sarcophilus harrisii	33.00	7.00e-79	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence