iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-022515

Ensembl Protein ID

ENSCPOP00000010310.2

UniProt Accession

H0VJ88; H0VJ88_CAVPO

Genbank Protein ID

ENSCPOP00000010310

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02021679

Gene Name

LYST

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000011468.3	ENSCPOT00000011574.2	ENSCPOP00000010310.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-06	27.0	3597	3629

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           gHt+++t+l f   +  +l+s s+Dgt+ vWDl 
   Q: 3597 GHTEEITSL-FvckPYSILISVSRDGTCIVWDLN 3629
           8********.99875578**************85 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSTDSNSLAR EFLTDVNRLC NAVVQRVEAR EEEEEETHMA TLGQYLVHGR GFLLLTRLNS 60
IIDQALTCRE ELLTLLLSLL PLVWKIPVQE QQATDFNLPL SSNIILTKEK NSSSQRPTQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACCG ACAGTAACTC ACTGGCACGT GAATTTCTGA CTGATGTCAA CCGGCTTTGC 60
AATGCAGTGG TGCAGAGGGT GGAAGCCAGG GAGGAAGAAG AAGAGGAGAC ACACATGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR000409--BEACH_dom
IPR030464--LYST
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0015630--C:microtubule cytoskeleton
GO:0032510--P:endosome to lysosome transport via multivesicular body sorting pathway
GO:0007040--P:lysosome organization
GO:0042267--P:natural killer cell mediated cytotoxicity
GO:0043473--P:pigmentation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002188	Ailuropoda melanoleuca	84.05	0.00e+00	6454.00
IUUC-Apl-003779	Anas platyrhynchos	69.22	0.00e+00	5144.00
IUUC-Ame-010834	Astyanax mexicanus	58.99	0.00e+00	4275.00
IUUC-Bta-013274	Bos taurus	83.86	0.00e+00	6374.00
IUUC-Cja-019682	Callithrix jacchus	85.76	0.00e+00	6489.00
IUUC-Cfa-020625	Canis familiaris	83.68	0.00e+00	6300.00
IUUC-Csa-023804	Chlorocebus sabaeus	86.01	0.00e+00	6502.00
IUUC-Cin-025176	Ciona intestinalis	45.20	4.00e-86	311.00
IUUC-Csv-026108	Ciona savignyi	50.45	0.00e+00	645.00
IUUC-Dre-027544	Danio rerio	61.07	0.00e+00	3201.00
IUUC-Dno-029030	Dasypus novemcinctus	82.33	0.00e+00	6248.00
IUUC-Dor-031065	Dipodomys ordii	89.76	0.00e+00	1660.00
IUUC-Eca-034391	Equus caballus	84.24	0.00e+00	6380.00
IUUC-Fal-037194	Ficedula albicollis	68.41	0.00e+00	5093.00
IUUC-Gmo-039256	Gadus morhua	70.56	0.00e+00	2149.00
IUUC-Gga-040318	Gallus gallus	69.01	0.00e+00	5094.00
IUUC-Gac-042425	Gasterosteus aculeatus	58.52	0.00e+00	4158.00
IUUC-Ggo-045550	Gorilla gorilla	85.67	0.00e+00	6503.00
IUUC-Hsa-046612	Homo sapiens	86.25	0.00e+00	6546.00
IUUC-Laf-054133	Loxodonta africana	83.20	0.00e+00	6246.00
IUUC-Mcc-055373	Macaca mulatta	86.23	0.00e+00	6553.00
IUUC-Mga-059475	Meleagris gallopavo	67.15	0.00e+00	4937.00
IUUC-Mmr-061795	Microcebus murinus	85.94	0.00e+00	6461.00
IUUC-Mlu-067930	Myotis lucifugus	80.93	0.00e+00	3556.00
IUUC-Nle-069205	Nomascus leucogenys	85.08	0.00e+00	6399.00
IUUC-Ont-071764	Oreochromis niloticus	59.07	0.00e+00	4136.00
IUUC-Ocu-074479	Oryctolagus cuniculus	83.87	0.00e+00	6357.00
IUUC-Ptr-091393	Pan troglodytes	86.10	0.00e+00	6540.00
IUUC-Pan-092369	Papio anubis	86.11	0.00e+00	6514.00
IUUC-Pfo-096100	Poecilia formosa	61.22	0.00e+00	3249.00
IUUC-Pab-098733	Pongo abelii	85.08	0.00e+00	6403.00
IUUC-Pca-100429	Procavia capensis	77.47	0.00e+00	2358.00
IUUC-Sha-106595	Sarcophilus harrisii	69.29	0.00e+00	4986.00
IUUC-Sar-113059	Sorex araneus	69.73	0.00e+00	1758.00
IUUC-Ssc-115879	Sus scrofa	78.81	0.00e+00	5794.00
IUUC-Tru-118616	Takifugu rubripes	58.46	0.00e+00	4105.00
IUUC-Tsy-119568	Tarsius syrichta	78.96	0.00e+00	4251.00
IUUC-Tni-120782	Tetraodon nigroviridis	57.95	0.00e+00	4114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence