iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oga-088875

Ensembl Protein ID

ENSOGAP00000004247.2

UniProt Accession

H0WQL4; H0WQL4_OTOGA

Genbank Protein ID

ENSOGAP00000004247

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03058608

Gene Name

MED16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000004749.2	ENSOGAT00000004752.2	ENSOGAP00000004247.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-06	26.5	80	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H++ +tcl++  s+ +l+s+  Dg+ik+W++ +
   Q: 80   HSEAITCLEWdqSGSRLLSADADGQIKCWSMAD 112
           99********965599*************9765 PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MCSIRTSVAG GMMDLAYVCE WEKWPKSTHC PSVPLACAWS CRNLIAFTTD LRSDDQDLTR 60
VIHILDTEHP WDLYSIASEH SEAITCLEWD QSGSRLLSAD ADGQIKCWSM ADHLANSWES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTGCTCCA TCCGCAGTGT ATTTATAGTT CCTACTAGCA AATACTTTAC AGTAAGGGCG 60
AAATTACTTG AAAACTAACA TCCCACTAGT TTTATTTTTA AGTTTAATAT TTGGTGTACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0016020--C:membrane
GO:0004872--F:receptor activity
GO:0030375--F:thyroid hormone receptor coactivator activity
GO:0030521--P:androgen receptor signaling pathway
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	72.45	0.00e+00	1162.00
IUUC-Bta-012729	Bos taurus	92.91	0.00e+00	1495.00
IUUC-Cja-019000	Callithrix jacchus	93.88	6.00e-101	359.00
IUUC-Cfa-020876	Canis familiaris	95.83	0.00e+00	1548.00
IUUC-Cpo-021655	Cavia porcellus	94.24	0.00e+00	1515.00
IUUC-Dre-027473	Danio rerio	75.69	0.00e+00	1238.00
IUUC-Dno-029564	Dasypus novemcinctus	92.76	0.00e+00	1056.00
IUUC-Eca-033914	Equus caballus	94.55	0.00e+00	914.00
IUUC-Fca-036338	Felis catus	95.71	0.00e+00	845.00
IUUC-Fal-037249	Ficedula albicollis	86.78	0.00e+00	1459.00
IUUC-Gmo-039447	Gadus morhua	72.31	7.00e-168	583.00
IUUC-Gga-041100	Gallus gallus	86.53	0.00e+00	1368.00
IUUC-Gac-042603	Gasterosteus aculeatus	59.09	0.00e+00	889.00
IUUC-Ggo-044794	Gorilla gorilla	95.75	0.00e+00	1177.00
IUUC-Hsa-045722	Homo sapiens	94.75	0.00e+00	862.00
IUUC-Itr-048948	Ictidomys tridecemlineatus	95.48	0.00e+00	1538.00
IUUC-Loc-052871	Lepisosteus oculatus	78.68	0.00e+00	1274.00
IUUC-Mcc-055201	Macaca mulatta	96.06	0.00e+00	1176.00
IUUC-Mga-059807	Meleagris gallopavo	83.21	0.00e+00	1382.00
IUUC-Mmr-060781	Microcebus murinus	95.57	0.00e+00	1561.00
IUUC-Mpu-066388	Mustela putorius furo	95.10	0.00e+00	1532.00
IUUC-Ont-072316	Oreochromis niloticus	77.29	0.00e+00	1235.00
IUUC-Ola-086721	Oryzias latipes	75.73	0.00e+00	1201.00
IUUC-Oar-090444	Ovis aries	94.13	0.00e+00	1523.00
IUUC-Ptr-091117	Pan troglodytes	93.12	0.00e+00	850.00
IUUC-Pan-091807	Papio anubis	95.74	0.00e+00	1494.00
IUUC-Pfo-097356	Poecilia formosa	77.29	0.00e+00	1240.00
IUUC-Pab-097953	Pongo abelii	93.35	0.00e+00	1139.00
IUUC-Pca-100896	Procavia capensis	93.15	0.00e+00	1504.00
IUUC-Rno-105038	Rattus norvegicus	93.05	0.00e+00	1508.00
IUUC-Tgu-116750	Taeniopygia guttata	86.08	0.00e+00	1450.00
IUUC-Tru-118405	Takifugu rubripes	76.31	0.00e+00	1261.00
IUUC-Tni-120217	Tetraodon nigroviridis	78.54	0.00e+00	972.00
IUUC-Ttr-129222	Tursiops truncatus	94.26	0.00e+00	1523.00
IUUC-Xtr-132084	Xenopus tropicalis	82.03	0.00e+00	1273.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence