iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109648

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, PUB59

Genbank Nucleotide ID

GL377565

Gene Name

PUB59-1; SELMODRAFT_437541

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_437541	EFJ38655	EFJ38655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-25	88.8	259	289
E3 activity/RING/U-box	1.00e-14	55.0	2	66
UBD/Beta-Prp	9.80e-49	166.8	224	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+ +vt+++f   d+l++++s D+t+k+W 
   Q: 259  GHSKKVTSVKFvaRDDLVLTASADKTVKIWQ 289
           8************99***************5 PP

E3 activity/RING/U-box

   S: 7    lCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
            C+Is+  +++Pv+++ sG  ++r+ Iek+la++g+ cPvt+++lteedl P +t +++  + + +
   Q: 2    FCAISGLTPEEPVISKrSGLLFERRLIEKHLAENGT-CPVTGESLTEEDLLPVKTNKAVKPRPVTA 66
           6**********************************9.********************999887665 PP

UBD/Beta-Prp

   S: 15   cvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw...dlstgkcvhtlkghedsvlslsfspsgdklvsG 112
           +++++ +k++++tg+ dg  +v+d ++g  ++sl gh+++vt+vkf  ++++ +t+s D+t+k+w   +  +++c +tlk+h++++++++++p++ ++v++
   Q: 224  SIDIHHQKDVILTGGNDGNAIVFDRSSGEIVASLVGHSKKVTSVKFVARDDLVLTASADKTVKIWqggEEGAYSCKQTLKEHSAEIRAITVHPTNRFFVTA 324
           588999***********************************************************776666****************************** PP
   S: 113  shdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtg 212
           s+d+t   +dl++g+c  + t++  ++  + +++hpdg +l +G++ + vr+Wd+k+++ + +++g h ++v+ lsf++ng +l++++ dg vk+wdl++ 
   Q: 325  SDDKTWAFYDLNSGTCTTQvTDAAVQDGYTAASFHPDGLILGTGTAESLVRIWDVKSQNNVAKFEG-HSGPVTELSFSENGYFLATAASDG-VKVWDLRKL 423
           *****************99999999999*************************************9.********************9998.9******99 PP
   S: 213  ecvrtlnght..dnvksvrfspnderlvsgssD 243
           +  r++  ++  ++++ v+f+  + +l+ ++sD
   Q: 424  KNFRSFSPYDpsTPTSTVQFDHSGSYLALAGSD 456
           99999986554499999****999999999998 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MFCAISGLTP EEPVISKRSG LLFERRLIEK HLAENGTCPV TGESLTEEDL LPVKTNKAVK 60
PRPVTATSIP GMLGMFQNEW DAVVLSNYHL EQQLNNARQE LSHALYQHDA ACRVIARLKT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTGCG CCAGTGAGTG AATGCTCCTT CTCTAGCTCC AGCCGTCGTT ACGAGCTCGT 60
ATTGTGTGTT TTTCTCGCAG TCTCTGGATT GACGCCGGAA GAGCCCGTGA TTTCCAAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR013915--Pre-mRNA_splic_Prp19
IPR003613--Ubox_domain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08606--Prp19
PF04564--U-box
PF00400--WD40

SMART

SM00504--Ubox
SM00320--WD40

Gene Ontology

GO:0016874--F:ligase activity
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

smo:SELMODRAFT_437541

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000488	Aegilops tauschii	61.22	0.00e+00	658.00
IUUC-Aml-001230	Ailuropoda melanoleuca	43.77	4.00e-111	394.00
IUUC-Atr-002594	Amborella trichopoda	66.54	0.00e+00	739.00
IUUC-Apl-003686	Anas platyrhynchos	41.27	2.00e-84	305.00
IUUC-Aca-005272	Anolis carolinensis	45.74	3.00e-118	417.00
IUUC-Aly-005586	Arabidopsis lyrata	65.05	0.00e+00	700.00
IUUC-Ath-007696	Arabidopsis thaliana	64.20	0.00e+00	681.00
IUUC-Ago-007879	Ashbya gossypii	43.88	5.00e-26	111.00
IUUC-Acl-008335	Aspergillus clavatus	34.89	6.00e-65	241.00
IUUC-Afl-008527	Aspergillus flavus	35.27	2.00e-68	252.00
IUUC-Afu-008957	Aspergillus fumigatus	35.43	2.00e-73	268.00
IUUC-Ani-009280	Aspergillus nidulans	35.43	4.00e-65	241.00
IUUC-Ang-009746	Aspergillus niger	34.32	3.00e-67	248.00
IUUC-Aor-009905	Aspergillus oryzae	35.08	4.00e-72	264.00
IUUC-Ate-010412	Aspergillus terreus	35.86	2.00e-64	239.00
IUUC-Ame-011561	Astyanax mexicanus	44.06	2.00e-44	171.00
IUUC-Bgr-012283	Blumeria graminis	31.12	5.00e-54	204.00
IUUC-Bta-013242	Bos taurus	44.77	4.00e-117	414.00
IUUC-Bdi-014896	Brachypodium distachyon	66.28	0.00e+00	736.00
IUUC-Bol-016045	Brassica oleracea	64.79	0.00e+00	699.00
IUUC-Bra-017902	Brassica rapa	65.05	0.00e+00	698.00
IUUC-Cel-018271	Caenorhabditis elegans	38.13	4.00e-97	347.00
IUUC-Cja-019879	Callithrix jacchus	44.87	2.00e-116	411.00
IUUC-Cfa-020175	Canis familiaris	44.77	4.00e-117	414.00
IUUC-Cpo-022379	Cavia porcellus	44.96	3.00e-117	414.00
IUUC-Cre-022993	Chlamydomonas reinhardtii	47.18	1.00e-133	468.00
IUUC-Csa-023500	Chlorocebus sabaeus	44.96	1.00e-117	415.00
IUUC-Cho-025065	Choloepus hoffmanni	38.17	5.00e-47	180.00
IUUC-Cin-025699	Ciona intestinalis	44.27	7.00e-101	359.00
IUUC-Csv-026128	Ciona savignyi	42.72	1.00e-110	392.00
IUUC-Cgl-026507	Colletotrichum gloeosporioides	33.01	8.00e-70	256.00
IUUC-Cne-026860	Cryptococcus neoformans	37.04	2.00e-94	338.00
IUUC-Dre-028187	Danio rerio	44.75	8.00e-116	409.00
IUUC-Dno-029453	Dasypus novemcinctus	44.96	2.00e-117	415.00
IUUC-Dor-030150	Dipodomys ordii	42.74	1.00e-39	157.00
IUUC-Dse-031220	Dothistroma septosporum	33.72	4.00e-70	258.00
IUUC-Dme-031906	Drosophila melanogaster	44.62	2.00e-110	392.00
IUUC-Ete-033035	Echinops telfairi	43.83	7.00e-55	207.00
IUUC-Eca-033478	Equus caballus	44.77	6.00e-117	413.00
IUUC-Eeu-034974	Erinaceus europaeus	44.98	7.00e-76	277.00
IUUC-Fca-036194	Felis catus	44.57	2.00e-116	411.00
IUUC-Fal-037417	Ficedula albicollis	45.35	4.00e-118	417.00
IUUC-Fox-037922	Fusarium oxysporum	33.80	1.00e-69	256.00
IUUC-Fso-038256	Fusarium solani	34.44	2.00e-75	275.00
IUUC-Gmo-038713	Gadus morhua	45.33	5.00e-118	417.00
IUUC-Ggr-039854	Gaeumannomyces graminis	32.62	5.00e-57	214.00
IUUC-Gga-041143	Gallus gallus	45.54	6.00e-119	420.00
IUUC-Gac-042129	Gasterosteus aculeatus	45.17	2.00e-119	421.00
IUUC-Gma-043635	Glycine max	67.50	0.00e+00	744.00
IUUC-Ggo-045262	Gorilla gorilla	44.96	1.00e-117	415.00
IUUC-Hsa-046036	Homo sapiens	44.96	1.00e-117	415.00
IUUC-Hvu-047442	Hordeum vulgare	63.67	2.00e-119	421.00
IUUC-Itr-048169	Ictidomys tridecemlineatus	44.77	2.00e-114	405.00
IUUC-Kpa-049195	Komagataella pastoris	27.59	7.00e-23	100.00
IUUC-Lch-050105	Latimeria chalumnae	46.12	1.00e-120	425.00
IUUC-Lpe-050976	Leersia perrieri	65.69	0.00e+00	716.00
IUUC-Loc-052042	Lepisosteus oculatus	40.92	2.00e-83	302.00
IUUC-Lma-053143	Leptosphaeria maculans	36.54	3.00e-75	276.00
IUUC-Laf-053451	Loxodonta africana	43.71	1.00e-114	405.00
IUUC-Mcc-055786	Macaca mulatta	44.96	1.00e-117	415.00
IUUC-Meu-056161	Macropus eugenii	44.83	2.00e-52	199.00
IUUC-Mor-057215	Magnaporthe oryzae	32.11	4.00e-60	224.00
IUUC-Mpo-057419	Magnaporthe poae	31.65	4.00e-52	197.00
IUUC-Mtr-057756	Medicago truncatula	65.82	0.00e+00	716.00
IUUC-Mla-059085	Melampsora laricipopulina	36.50	6.00e-80	290.00
IUUC-Mga-060158	Meleagris gallopavo	44.79	4.00e-106	377.00
IUUC-Mvi-060441	Microbotryum violaceum	35.09	2.00e-74	272.00
IUUC-Mmr-061085	Microcebus murinus	44.96	1.00e-117	415.00
IUUC-Mdo-061804	Monodelphis domestica	44.96	1.00e-117	416.00
IUUC-Mmu-063608	Mus musculus	42.99	4.00e-113	400.00
IUUC-Mac-064972	Musa acuminata	66.73	0.00e+00	733.00
IUUC-Mpu-065700	Mustela putorius furo	44.77	3.00e-117	414.00
IUUC-Mlu-068223	Myotis lucifugus	43.88	5.00e-115	407.00
IUUC-Ncr-068729	Neurospora crassa	33.98	1.00e-63	236.00
IUUC-Nle-069754	Nomascus leucogenys	44.96	1.00e-117	415.00
IUUC-Opr-070621	Ochotona princeps	45.51	2.00e-111	394.00
IUUC-Ont-071377	Oreochromis niloticus	45.53	1.00e-116	412.00
IUUC-Oan-073498	Ornithorhynchus anatinus	34.44	3.00e-39	154.00
IUUC-Ocu-074182	Oryctolagus cuniculus	43.20	7.00e-114	403.00
IUUC-Oba-075509	Oryza barthii	66.86	0.00e+00	734.00
IUUC-Obr-076480	Oryza brachyantha	66.47	0.00e+00	735.00
IUUC-Ogl-077052	Oryza glaberrima	66.86	0.00e+00	734.00
IUUC-Ogu-078919	Oryza glumaepatula	66.67	0.00e+00	732.00
IUUC-Oin-079357	Oryza indica	63.55	0.00e+00	683.00
IUUC-Olo-080376	Oryza longistaminata	66.67	0.00e+00	682.00
IUUC-Ome-081973	Oryza meridionalis	66.88	0.00e+00	683.00
IUUC-Oni-082849	Oryza nivara	66.86	0.00e+00	736.00
IUUC-Opu-083243	Oryza punctata	67.06	0.00e+00	738.00
IUUC-Oru-084613	Oryza rufipogon	66.86	0.00e+00	733.00
IUUC-Osa-085407	Oryza sativa	66.86	0.00e+00	734.00
IUUC-Ola-086566	Oryzias latipes	45.45	7.00e-117	413.00
IUUC-Olu-087757	Ostreococcus lucimarinus	45.19	9.00e-116	409.00
IUUC-Oga-089010	Otolemur garnettii	43.33	1.00e-111	395.00
IUUC-Oar-089638	Ovis aries	44.77	4.00e-117	414.00
IUUC-Ptr-091141	Pan troglodytes	44.96	1.00e-117	415.00
IUUC-Pan-092662	Papio anubis	44.96	1.00e-117	415.00
IUUC-Psi-093777	Pelodiscus sinensis	43.88	1.00e-89	322.00
IUUC-Pno-095115	Phaeosphaeria nodorum	38.30	3.00e-77	281.00
IUUC-Ppa-095841	Physcomitrella patens	70.74	0.00e+00	771.00
IUUC-Pfo-096390	Poecilia formosa	45.91	3.00e-118	417.00
IUUC-Pab-098250	Pongo abelii	45.40	3.00e-114	404.00
IUUC-Pop-099854	Populus trichocarpa	66.67	0.00e+00	738.00
IUUC-Pca-100553	Procavia capensis	45.16	5.00e-116	410.00
IUUC-Ppe-101383	Prunus persica	64.27	0.00e+00	693.00
IUUC-Pva-102189	Pteropus vampyrus	44.77	3.00e-117	414.00
IUUC-Pgr-103304	Puccinia graminis	34.81	1.00e-80	292.00
IUUC-Ptt-103984	Puccinia triticina	34.62	7.00e-82	297.00
IUUC-Pte-104385	Pyrenophora teres	33.79	1.00e-75	276.00
IUUC-Pyt-104697	Pyrenophora triticirepentis	34.05	6.00e-75	273.00
IUUC-Rno-105581	Rattus norvegicus	44.57	9.00e-117	412.00
IUUC-Sha-107071	Sarcophilus harrisii	43.12	1.00e-113	402.00
IUUC-Sja-107697	Schizosaccharomyces japonicus	31.61	7.00e-46	177.00
IUUC-Spo-108315	Schizosaccharomyces pombe	31.36	1.00e-44	173.00
IUUC-Sit-109873	Setaria italica	66.28	0.00e+00	721.00
IUUC-Sly-111673	Solanum lycopersicum	65.95	0.00e+00	700.00
IUUC-Stu-112125	Solanum tuberosum	65.95	0.00e+00	700.00
IUUC-Sbi-114696	Sorghum bicolor	58.24	0.00e+00	630.00
IUUC-Ssc-116260	Sus scrofa	44.77	4.00e-117	414.00
IUUC-Tgu-116533	Taeniopygia guttata	45.54	6.00e-119	420.00
IUUC-Tru-117800	Takifugu rubripes	44.94	6.00e-117	413.00
IUUC-Tsy-118980	Tarsius syrichta	43.14	2.00e-103	368.00
IUUC-Tni-120334	Tetraodon nigroviridis	38.01	2.00e-91	328.00
IUUC-Tca-121807	Theobroma cacao	67.57	0.00e+00	738.00
IUUC-Tre-121920	Trichoderma reesei	31.97	6.00e-65	240.00
IUUC-Tvi-122294	Trichoderma virens	31.05	4.00e-56	211.00
IUUC-Tae-125713	Triticum aestivum	66.08	0.00e+00	739.00
IUUC-Tur-126664	Triticum urartu	57.37	0.00e+00	677.00
IUUC-Tme-127026	Tuber melanosporum	36.40	1.00e-76	279.00
IUUC-Tbe-127582	Tupaia belangeri	45.29	2.00e-76	278.00
IUUC-Ttr-128313	Tursiops truncatus	44.77	8.00e-116	409.00
IUUC-Uma-129626	Ustilago maydis	34.43	5.00e-81	294.00
IUUC-Vda-129699	Verticillium dahliae	35.08	3.00e-69	254.00
IUUC-Vpa-130593	Vicugna pacos	46.34	7.00e-110	389.00
IUUC-Vvi-131668	Vitis vinifera	66.28	0.00e+00	739.00
IUUC-Xtr-132186	Xenopus tropicalis	47.49	3.00e-104	371.00
IUUC-Xma-133212	Xiphophorus maculatus	46.11	2.00e-117	415.00
IUUC-Yli-134607	Yarrowia lipolytica	54.20	2.00e-37	147.00
IUUC-Zma-135662	Zea mays	65.50	0.00e+00	723.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence