iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074729

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02037050

Gene Name

USP54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000012547.3	ENSOCUT00000030381.1	ENSOCUP00000022722.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.40e-24	87.0	32	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavspre.....llkalkkeaee 83
           Gl+N   +N+C++NS+LQ+L+++  +r+ + + +++k+  +       ++ ++l+ +f++++ +++++v p++     l k++++e+ +
   Q: 32   GLSNEpgQNSCFLNSALQVLWHLDIFRRSFRQLTTHKCMGD------SCIFCALKGIFNQFQ-CSNEKVLPSDtlrsaLAKTFQDEQ-R 112
           88887668******************************986......59************5.555555555443333555555444.5 PP
   S: 84   fsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldl 172
           f+     Da E+++ ll +++ ++                    de +e+  + ++++ ++ F ++l +q++c +c+ +s    pf+++
   Q: 113  FQLGIMDDAAECFENLLMRIHFHI-------------------ADETKEDICTAQHCISHQKFAMTLFEQCVCTSCGATSDPL-PFIQM 181
           99**********************...................3455677899*************************99766.9**** PP
   S: 173  slpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkk 252
              ++  + +++             +++ +  ++ +  g+ +   ++c ++ +  +++   + P+++++ L +   s + +  e +  +
   Q: 182  VHYISTTSLCNQAicmlerrekPSPSMFGELLQNASTMGDLRNCPSNCGERIR-IRRVL-MNAPQIITIGLVWD--SDHSDLAEDVIHS 266
           *****999988889999999985556666666677777666667777777664.56655.566**********9..3333444444444 PP
   S: 253  vefpleLdlsp..fctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev..keeevleetg...staYvl 333
           + +   L+l    f ++ ++  k+++ Y L+++++++G     HY ++  ++k + W++fdD +V+e+  k+++v++++     ++ +l
   Q: 267  LGTC--LKLGDlfFRVT-DDRAKQSELY-LVGMICYYG----KHYSTFFFQTKIRkWMYFDDAHVKEIgpKWKDVVTKCIkghYQPLLL 347
           4444..55555213333.3333335555.*********....9*****99987767************766899988655555555566 PP
   S: 334  fY 335
           +Y
   Q: 348  LY 349
           66 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MSWKRNYFSG SRGSVQGMFA PRSSTSIAPS KGLSNEPGQN SCFLNSALQV LWHLDIFRRS 60
FRQLTTHKCM GDSCIFCALK GIFNQFQCSN EKVLPSDTLR SALAKTFQDE QRFQLGIMDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTGGA AGAGAAATTA CTTTTCAGGG AGCCGTGGTA GTGTCCAAGG GATGTTTGCA 60
CCTCGAAGCT CAACCTCCAT AGCCCCCAGC AAAGGCCTCA GCAATGAGCC GGGGCAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR028889--USP_dom

PROSITE

PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

KEGG

ocu:100359321

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	29.37	2.00e-18	86.70
IUUC-Aml-001414	Ailuropoda melanoleuca	86.53	0.00e+00	2544.00
IUUC-Atr-002451	Amborella trichopoda	30.06	5.00e-37	150.00
IUUC-Apl-004044	Anas platyrhynchos	80.17	0.00e+00	1216.00
IUUC-Aca-004351	Anolis carolinensis	58.14	0.00e+00	1524.00
IUUC-Aly-005468	Arabidopsis lyrata	32.78	1.00e-43	172.00
IUUC-Ath-006682	Arabidopsis thaliana	32.49	9.00e-43	169.00
IUUC-Ame-011525	Astyanax mexicanus	63.44	0.00e+00	980.00
IUUC-Bta-013344	Bos taurus	85.12	0.00e+00	2514.00
IUUC-Bdi-015058	Brachypodium distachyon	31.86	2.00e-40	162.00
IUUC-Bol-015670	Brassica oleracea	30.99	4.00e-39	156.00
IUUC-Bra-016731	Brassica rapa	32.07	2.00e-41	165.00
IUUC-Cja-018724	Callithrix jacchus	85.93	0.00e+00	2519.00
IUUC-Cfa-021222	Canis familiaris	86.51	0.00e+00	2613.00
IUUC-Cpo-021795	Cavia porcellus	84.52	0.00e+00	2098.00
IUUC-Cre-022697	Chlamydomonas reinhardtii	23.80	5.00e-17	84.70
IUUC-Csa-023262	Chlorocebus sabaeus	86.36	0.00e+00	2550.00
IUUC-Cho-024422	Choloepus hoffmanni	82.96	0.00e+00	2044.00
IUUC-Cin-025752	Ciona intestinalis	68.60	8.00e-48	182.00
IUUC-Csv-026063	Ciona savignyi	56.10	5.00e-112	397.00
IUUC-Dre-028046	Danio rerio	64.57	0.00e+00	965.00
IUUC-Dno-029417	Dasypus novemcinctus	81.45	0.00e+00	2318.00
IUUC-Dor-030653	Dipodomys ordii	72.84	0.00e+00	978.00
IUUC-Dme-032071	Drosophila melanogaster	53.53	1.00e-103	372.00
IUUC-Ete-032692	Echinops telfairi	66.53	0.00e+00	780.00
IUUC-Eca-033235	Equus caballus	86.32	0.00e+00	2244.00
IUUC-Eeu-034975	Erinaceus europaeus	65.94	0.00e+00	916.00
IUUC-Fca-036070	Felis catus	85.24	0.00e+00	2584.00
IUUC-Fal-037089	Ficedula albicollis	59.88	0.00e+00	1602.00
IUUC-Gmo-038653	Gadus morhua	74.15	1.00e-171	595.00
IUUC-Gga-041241	Gallus gallus	60.56	0.00e+00	1613.00
IUUC-Gac-042157	Gasterosteus aculeatus	79.44	0.00e+00	679.00
IUUC-Gma-043273	Glycine max	30.90	4.00e-37	150.00
IUUC-Ggo-045626	Gorilla gorilla	86.59	0.00e+00	2573.00
IUUC-Hsa-045767	Homo sapiens	86.71	0.00e+00	2571.00
IUUC-Hvu-047657	Hordeum vulgare	31.11	2.00e-41	165.00
IUUC-Itr-048187	Ictidomys tridecemlineatus	77.00	0.00e+00	2368.00
IUUC-Lch-049712	Latimeria chalumnae	87.79	0.00e+00	716.00
IUUC-Lpe-051572	Leersia perrieri	31.75	2.00e-38	155.00
IUUC-Loc-052615	Lepisosteus oculatus	66.56	0.00e+00	1033.00
IUUC-Laf-054578	Loxodonta africana	79.87	0.00e+00	2305.00
IUUC-Mcc-054696	Macaca mulatta	86.48	0.00e+00	2548.00
IUUC-Meu-056841	Macropus eugenii	53.61	0.00e+00	664.00
IUUC-Mtr-058682	Medicago truncatula	28.82	1.00e-32	135.00
IUUC-Mga-059519	Meleagris gallopavo	48.47	0.00e+00	1077.00
IUUC-Mmr-060701	Microcebus murinus	85.71	0.00e+00	2476.00
IUUC-Mdo-062433	Monodelphis domestica	68.63	0.00e+00	1952.00
IUUC-Mmu-063480	Mus musculus	74.85	0.00e+00	2197.00
IUUC-Mac-064469	Musa acuminata	32.43	9.00e-20	92.80
IUUC-Mpu-066404	Mustela putorius furo	86.02	0.00e+00	2632.00
IUUC-Mlu-067841	Myotis lucifugus	79.50	0.00e+00	2304.00
IUUC-Nle-070110	Nomascus leucogenys	87.21	0.00e+00	2227.00
IUUC-Opr-070676	Ochotona princeps	88.11	0.00e+00	1415.00
IUUC-Ont-072289	Oreochromis niloticus	70.53	0.00e+00	710.00
IUUC-Oan-073551	Ornithorhynchus anatinus	65.57	0.00e+00	1628.00
IUUC-Oba-075174	Oryza barthii	29.53	2.00e-33	138.00
IUUC-Obr-076268	Oryza brachyantha	32.94	9.00e-42	166.00
IUUC-Ogl-077138	Oryza glaberrima	32.06	6.00e-39	156.00
IUUC-Ogu-078705	Oryza glumaepatula	29.53	2.00e-33	138.00
IUUC-Oin-079125	Oryza indica	32.06	8.00e-39	156.00
IUUC-Olo-080872	Oryza longistaminata	29.53	2.00e-33	138.00
IUUC-Ome-081864	Oryza meridionalis	29.53	6.00e-33	137.00
IUUC-Oni-082109	Oryza nivara	29.53	2.00e-33	138.00
IUUC-Opu-083823	Oryza punctata	32.65	1.00e-39	159.00
IUUC-Oru-084310	Oryza rufipogon	29.53	3.00e-33	138.00
IUUC-Osa-085583	Oryza sativa	31.47	5.00e-38	152.00
IUUC-Ola-086742	Oryzias latipes	79.89	0.00e+00	652.00
IUUC-Oga-088920	Otolemur garnettii	88.36	0.00e+00	2167.00
IUUC-Oar-089644	Ovis aries	85.18	0.00e+00	2513.00
IUUC-Ptr-091530	Pan troglodytes	87.08	0.00e+00	2225.00
IUUC-Pan-092190	Papio anubis	93.09	0.00e+00	1588.00
IUUC-Psi-094022	Pelodiscus sinensis	60.65	0.00e+00	1610.00
IUUC-Pma-094745	Petromyzon marinus	59.89	2.00e-134	472.00
IUUC-Ppa-095930	Physcomitrella patens	29.81	2.00e-38	155.00
IUUC-Pfo-096072	Poecilia formosa	78.56	0.00e+00	697.00
IUUC-Pab-097979	Pongo abelii	87.35	0.00e+00	2053.00
IUUC-Pop-099539	Populus trichocarpa	31.79	3.00e-37	151.00
IUUC-Pca-101005	Procavia capensis	72.04	0.00e+00	2037.00
IUUC-Ppe-101918	Prunus persica	30.61	2.00e-38	155.00
IUUC-Pva-103125	Pteropus vampyrus	85.47	0.00e+00	2482.00
IUUC-Rno-105463	Rattus norvegicus	77.33	0.00e+00	2266.00
IUUC-Sha-107164	Sarcophilus harrisii	67.56	0.00e+00	1845.00
IUUC-Sit-110021	Setaria italica	31.96	3.00e-37	151.00
IUUC-Sly-110975	Solanum lycopersicum	31.44	4.00e-39	157.00
IUUC-Stu-112904	Solanum tuberosum	31.10	6.00e-37	150.00
IUUC-Sar-113423	Sorex araneus	64.75	0.00e+00	856.00
IUUC-Sbi-114345	Sorghum bicolor	32.84	3.00e-41	164.00
IUUC-Ssc-116206	Sus scrofa	84.25	0.00e+00	2452.00
IUUC-Tgu-116521	Taeniopygia guttata	74.89	0.00e+00	1271.00
IUUC-Tru-118155	Takifugu rubripes	69.95	7.00e-172	596.00
IUUC-Tsy-118998	Tarsius syrichta	83.40	0.00e+00	2280.00
IUUC-Tni-120257	Tetraodon nigroviridis	80.10	0.00e+00	663.00
IUUC-Tca-121692	Theobroma cacao	31.58	7.00e-38	153.00
IUUC-Tae-125619	Triticum aestivum	31.67	2.00e-42	168.00
IUUC-Tur-126027	Triticum urartu	31.39	4.00e-42	167.00
IUUC-Tbe-128072	Tupaia belangeri	64.29	4.00e-145	508.00
IUUC-Ttr-128290	Tursiops truncatus	84.89	0.00e+00	1968.00
IUUC-Vpa-130213	Vicugna pacos	83.65	0.00e+00	2118.00
IUUC-Vvi-131652	Vitis vinifera	30.90	2.00e-38	155.00
IUUC-Xtr-131831	Xenopus tropicalis	72.40	0.00e+00	1230.00
IUUC-Xma-133409	Xiphophorus maculatus	60.10	0.00e+00	844.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence