iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Nfi-068516

Ensembl Protein ID

CADNFIAP00000659

UniProt Accession

A1D3F5; ERB1_NEOFI

Genbank Protein ID

EAW22948.1

Protein Name

Ribosome biogenesis protein erb1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

DS027688

Gene Name

NFIA_016440; erb1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CADNFIAG00000698	CADNFIAT00000698	CADNFIAP00000659

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.00e-14	50.6	428	465

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+++v+ la  ++  ll++G+dDgt++vW+l tg++l
   Q: 428  GHKGRVRTLAVdPSgLLLATGGDDGTVRVWELLTGRQL 465
           8**********9665889*****************987 PP

Organism

Neosartorya fischeri

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MNGSKASKKR KAVTRDVEEE AGVFSGDELN TDNLDGALSD NANDLSSDED ESDSEVELID 60
DFSDEDDEEE EDVLDSDEIP SDGEDLAKKK SNTAPGELGA AMDDGESSSE GEQLNYRIEK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAATGGTT CGAAAGCTTC CAAGAAGCGC AAGGCAGTTA CTCGTGATGT GGAGGAGGAG 60
GCAGGCGTGT TTTCTGGAGA CGAATTGAAC ACAGACAACC TTGATGGAGC GCTTTCGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0042273--P:ribosomal large subunit biogenesis
GO:0006364--P:rRNA processing

KEGG

nfi:NFIA_016440

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	38.23	4.00e-102	363.00
IUUC-Aml-001507	Ailuropoda melanoleuca	42.17	2.00e-131	461.00
IUUC-Atr-003141	Amborella trichopoda	36.85	3.00e-68	250.00
IUUC-Apl-003545	Anas platyrhynchos	40.23	7.00e-114	402.00
IUUC-Aly-005649	Arabidopsis lyrata	41.49	3.00e-132	464.00
IUUC-Ath-007625	Arabidopsis thaliana	41.33	8.00e-125	439.00
IUUC-Ago-007958	Ashbya gossypii	54.12	0.00e+00	736.00
IUUC-Acl-008344	Aspergillus clavatus	91.27	0.00e+00	1291.00
IUUC-Afl-008616	Aspergillus flavus	88.73	0.00e+00	1298.00
IUUC-Afu-009083	Aspergillus fumigatus	96.10	0.00e+00	1352.00
IUUC-Ani-009365	Aspergillus nidulans	84.11	0.00e+00	1247.00
IUUC-Ang-009796	Aspergillus niger	85.16	0.00e+00	1224.00
IUUC-Aor-010015	Aspergillus oryzae	88.73	0.00e+00	1298.00
IUUC-Ate-010537	Aspergillus terreus	85.44	0.00e+00	1297.00
IUUC-Ame-011767	Astyanax mexicanus	47.81	4.00e-63	232.00
IUUC-Bgr-012286	Blumeria graminis	62.03	0.00e+00	912.00
IUUC-Bta-013569	Bos taurus	43.57	4.00e-143	499.00
IUUC-Bci-013820	Botrytis cinerea	63.81	0.00e+00	865.00
IUUC-Bdi-014477	Brachypodium distachyon	41.11	5.00e-127	446.00
IUUC-Bol-016099	Brassica oleracea	41.82	3.00e-133	467.00
IUUC-Bra-017174	Brassica rapa	41.67	8.00e-133	466.00
IUUC-Cel-018201	Caenorhabditis elegans	38.51	7.00e-115	406.00
IUUC-Cja-019009	Callithrix jacchus	39.75	2.00e-125	441.00
IUUC-Cfa-020173	Canis familiaris	40.03	8.00e-127	446.00
IUUC-Cpo-021796	Cavia porcellus	43.41	5.00e-142	496.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	42.43	5.00e-124	436.00
IUUC-Csa-023440	Chlorocebus sabaeus	44.38	2.00e-150	524.00
IUUC-Cin-025782	Ciona intestinalis	42.31	2.00e-149	520.00
IUUC-Csv-026352	Ciona savignyi	41.63	7.00e-145	505.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	58.57	0.00e+00	714.00
IUUC-Cne-027004	Cryptococcus neoformans	48.57	8.00e-179	619.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.32	2.00e-108	384.00
IUUC-Dre-028658	Danio rerio	44.63	2.00e-150	524.00
IUUC-Dno-028883	Dasypus novemcinctus	43.72	7.00e-143	499.00
IUUC-Dor-031031	Dipodomys ordii	42.79	1.00e-144	505.00
IUUC-Dse-031443	Dothistroma septosporum	59.17	0.00e+00	818.00
IUUC-Dme-031786	Drosophila melanogaster	42.66	1.00e-147	514.00
IUUC-Eca-033677	Equus caballus	43.88	4.00e-142	496.00
IUUC-Eeu-035310	Erinaceus europaeus	40.68	4.00e-106	376.00
IUUC-Fca-035888	Felis catus	42.64	9.00e-143	498.00
IUUC-Fal-037438	Ficedula albicollis	43.95	7.00e-118	416.00
IUUC-Fox-037973	Fusarium oxysporum	63.96	0.00e+00	862.00
IUUC-Fso-038187	Fusarium solani	63.68	0.00e+00	870.00
IUUC-Gmo-039114	Gadus morhua	40.78	4.00e-132	463.00
IUUC-Ggr-039746	Gaeumannomyces graminis	62.52	0.00e+00	875.00
IUUC-Gga-040631	Gallus gallus	41.64	3.00e-77	280.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.55	5.00e-141	493.00
IUUC-Gma-044215	Glycine max	41.10	1.00e-131	461.00
IUUC-Ggo-045587	Gorilla gorilla	44.19	2.00e-149	521.00
IUUC-Hsa-046319	Homo sapiens	44.19	6.00e-150	522.00
IUUC-Hvu-047526	Hordeum vulgare	41.11	4.00e-122	430.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.41	8.00e-143	499.00
IUUC-Kpa-049221	Komagataella pastoris	49.79	0.00e+00	665.00
IUUC-Lch-049640	Latimeria chalumnae	42.79	1.00e-151	528.00
IUUC-Lpe-051135	Leersia perrieri	42.65	6.00e-67	246.00
IUUC-Loc-051930	Lepisosteus oculatus	43.57	7.00e-151	525.00
IUUC-Lma-053290	Leptosphaeria maculans	63.11	0.00e+00	861.00
IUUC-Laf-053903	Loxodonta africana	40.40	9.00e-123	432.00
IUUC-Mcc-055471	Macaca mulatta	44.07	1.00e-149	521.00
IUUC-Meu-056190	Macropus eugenii	43.10	3.00e-143	500.00
IUUC-Mor-057135	Magnaporthe oryzae	62.97	0.00e+00	848.00
IUUC-Mpo-057475	Magnaporthe poae	61.58	0.00e+00	827.00
IUUC-Mtr-058689	Medicago truncatula	39.19	8.00e-118	416.00
IUUC-Mla-059149	Melampsora laricipopulina	49.71	1.00e-177	614.00
IUUC-Mga-059645	Meleagris gallopavo	33.96	1.00e-39	154.00
IUUC-Mvi-060485	Microbotryum violaceum	44.44	8.00e-146	510.00
IUUC-Mmr-061674	Microcebus murinus	44.00	7.00e-142	496.00
IUUC-Mdo-062973	Monodelphis domestica	43.21	3.00e-149	520.00
IUUC-Mmu-064180	Mus musculus	43.88	3.00e-146	510.00
IUUC-Mac-064535	Musa acuminata	40.36	6.00e-82	297.00
IUUC-Mpu-066406	Mustela putorius furo	43.57	4.00e-145	506.00
IUUC-Mlu-067795	Myotis lucifugus	43.57	6.00e-134	469.00
IUUC-Ncr-068767	Neurospora crassa	64.80	0.00e+00	823.00
IUUC-Opr-071084	Ochotona princeps	47.62	2.00e-59	221.00
IUUC-Ont-071614	Oreochromis niloticus	42.86	1.00e-148	518.00
IUUC-Oba-075980	Oryza barthii	42.36	2.00e-66	244.00
IUUC-Obr-076799	Oryza brachyantha	41.60	1.00e-124	439.00
IUUC-Ogl-077134	Oryza glaberrima	41.45	9.00e-119	419.00
IUUC-Ogu-078655	Oryza glumaepatula	39.60	3.00e-114	404.00
IUUC-Oin-079654	Oryza indica	41.45	2.00e-118	418.00
IUUC-Olo-080706	Oryza longistaminata	42.94	2.00e-67	248.00
IUUC-Ome-081716	Oryza meridionalis	42.65	7.00e-67	246.00
IUUC-Oni-082508	Oryza nivara	39.38	5.00e-111	393.00
IUUC-Opu-083707	Oryza punctata	42.94	4.00e-67	247.00
IUUC-Oru-084453	Oryza rufipogon	42.94	2.00e-67	248.00
IUUC-Osa-085811	Oryza sativa	41.29	2.00e-118	418.00
IUUC-Ola-087361	Oryzias latipes	43.47	6.00e-149	519.00
IUUC-Oga-088015	Otolemur garnettii	43.88	1.00e-148	518.00
IUUC-Oar-090058	Ovis aries	53.45	3.00e-50	191.00
IUUC-Ptr-090631	Pan troglodytes	42.95	1.00e-61	228.00
IUUC-Pan-092306	Papio anubis	44.38	1.00e-150	525.00
IUUC-Pma-094622	Petromyzon marinus	43.81	9.00e-154	535.00
IUUC-Pno-094794	Phaeosphaeria nodorum	60.56	0.00e+00	809.00
IUUC-Ppa-095528	Physcomitrella patens	38.61	7.00e-81	293.00
IUUC-Pfo-096682	Poecilia formosa	43.01	3.00e-152	530.00
IUUC-Pab-097939	Pongo abelii	44.43	3.00e-135	473.00
IUUC-Pop-099530	Populus trichocarpa	43.41	6.00e-124	436.00
IUUC-Pca-100333	Procavia capensis	43.45	2.00e-143	500.00
IUUC-Ppe-102078	Prunus persica	42.13	2.00e-128	451.00
IUUC-Pgr-103525	Puccinia graminis	48.00	2.00e-162	564.00
IUUC-Ptt-103929	Puccinia triticina	49.70	3.00e-156	543.00
IUUC-Pte-104029	Pyrenophora teres	64.79	0.00e+00	903.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	62.96	0.00e+00	909.00
IUUC-Rno-105248	Rattus norvegicus	43.72	4.00e-145	506.00
IUUC-Sce-106381	Saccharomyces cerevisiae	53.46	0.00e+00	717.00
IUUC-Sha-106519	Sarcophilus harrisii	44.19	7.00e-151	525.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	46.92	1.00e-162	565.00
IUUC-Spo-108071	Schizosaccharomyces pombe	46.37	1.00e-153	535.00
IUUC-Smo-109604	Selaginella moellendorffii	40.33	1.00e-114	405.00
IUUC-Sit-110551	Setaria italica	41.51	1.00e-122	432.00
IUUC-Sly-110970	Solanum lycopersicum	44.09	1.00e-75	275.00
IUUC-Stu-112593	Solanum tuberosum	41.15	1.00e-133	468.00
IUUC-Sar-113123	Sorex araneus	40.47	1.00e-58	218.00
IUUC-Sbi-113945	Sorghum bicolor	41.36	9.00e-126	442.00
IUUC-Sre-115188	Sporisorium reilianum	46.46	4.00e-162	563.00
IUUC-Ssc-115352	Sus scrofa	43.57	8.00e-146	508.00
IUUC-Tru-117685	Takifugu rubripes	44.70	1.00e-154	538.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.34	1.00e-147	514.00
IUUC-Tca-121664	Theobroma cacao	42.26	2.00e-135	474.00
IUUC-Tre-122229	Trichoderma reesei	63.99	0.00e+00	783.00
IUUC-Tvi-122576	Trichoderma virens	64.56	0.00e+00	802.00
IUUC-Tae-124110	Triticum aestivum	41.49	5.00e-116	410.00
IUUC-Tur-126781	Triticum urartu	38.39	4.00e-99	354.00
IUUC-Tme-127080	Tuber melanosporum	65.26	0.00e+00	868.00
IUUC-Ttr-128514	Tursiops truncatus	40.66	7.00e-89	319.00
IUUC-Uma-129556	Ustilago maydis	45.99	5.00e-156	543.00
IUUC-Vda-129715	Verticillium dahliae	64.80	0.00e+00	867.00
IUUC-Vvi-131211	Vitis vinifera	40.89	2.00e-122	431.00
IUUC-Xma-133883	Xiphophorus maculatus	43.16	2.00e-147	514.00
IUUC-Yli-134438	Yarrowia lipolytica	51.52	0.00e+00	663.00
IUUC-Zma-135341	Zea mays	37.32	1.00e-117	415.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence