iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Itr-047912

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01025101

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000011348.2	ENSSTOT00000011343.2	ENSSTOP00000010178.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-09	37.5	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +                ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSTAVSSGGRFRCPSCR 82
           *************************87777777888899977788899********8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDSL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSTAV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGCACTG AGGGGATGAA CTTCACCGTG GGCTTCAAGC CGCTGCTCGG GGATGCGCAC 60
AGCATGGACA GCCTGGAGAA GCAGCTCATC TGCCCCATCT GCCTGGAGAT GTTCTCCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	96.74	3.00e-133	467.00
IUUC-Apl-003341	Anas platyrhynchos	64.86	9.00e-128	449.00
IUUC-Aca-005384	Anolis carolinensis	64.35	8.00e-124	436.00
IUUC-Ame-010720	Astyanax mexicanus	65.61	2.00e-122	431.00
IUUC-Bta-013385	Bos taurus	96.40	2.00e-176	611.00
IUUC-Cja-019697	Callithrix jacchus	77.99	1.00e-134	472.00
IUUC-Cfa-020995	Canis familiaris	97.88	3.00e-169	587.00
IUUC-Cpo-021913	Cavia porcellus	96.69	0.00e+00	667.00
IUUC-Csa-023342	Chlorocebus sabaeus	97.49	0.00e+00	636.00
IUUC-Cin-025224	Ciona intestinalis	51.46	3.00e-93	334.00
IUUC-Csv-026374	Ciona savignyi	51.60	7.00e-82	296.00
IUUC-Dre-027562	Danio rerio	69.88	3.00e-143	500.00
IUUC-Dno-029582	Dasypus novemcinctus	97.26	3.00e-170	590.00
IUUC-Dor-031139	Dipodomys ordii	96.12	0.00e+00	644.00
IUUC-Ete-032346	Echinops telfairi	98.52	7.00e-109	386.00
IUUC-Eca-033645	Equus caballus	97.00	5.00e-178	616.00
IUUC-Eeu-035333	Erinaceus europaeus	69.12	1.00e-115	408.00
IUUC-Fca-035865	Felis catus	97.27	0.00e+00	627.00
IUUC-Fal-036978	Ficedula albicollis	77.56	6.00e-168	583.00
IUUC-Gmo-039021	Gadus morhua	61.71	3.00e-110	390.00
IUUC-Gga-040452	Gallus gallus	78.18	3.00e-162	564.00
IUUC-Gac-042165	Gasterosteus aculeatus	61.11	1.00e-118	419.00
IUUC-Ggo-044467	Gorilla gorilla	85.54	3.00e-171	593.00
IUUC-Hsa-046379	Homo sapiens	94.99	2.00e-176	610.00
IUUC-Lch-050029	Latimeria chalumnae	77.44	3.00e-152	530.00
IUUC-Loc-051801	Lepisosteus oculatus	80.97	3.00e-136	476.00
IUUC-Laf-054215	Loxodonta africana	96.13	0.00e+00	666.00
IUUC-Mcc-055027	Macaca mulatta	87.53	7.00e-179	619.00
IUUC-Meu-056412	Macropus eugenii	94.17	3.00e-169	587.00
IUUC-Mga-060112	Meleagris gallopavo	66.04	5.00e-125	441.00
IUUC-Mmr-060920	Microcebus murinus	96.66	0.00e+00	645.00
IUUC-Mdo-062832	Monodelphis domestica	96.66	1.00e-165	575.00
IUUC-Mmu-063707	Mus musculus	94.81	4.00e-180	623.00
IUUC-Mpu-066375	Mustela putorius furo	79.72	7.00e-107	379.00
IUUC-Mlu-067653	Myotis lucifugus	81.23	3.00e-138	484.00
IUUC-Nle-069020	Nomascus leucogenys	96.66	0.00e+00	632.00
IUUC-Opr-070577	Ochotona princeps	78.98	8.00e-144	503.00
IUUC-Ont-072491	Oreochromis niloticus	62.25	3.00e-120	424.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.76	2.00e-173	600.00
IUUC-Ocu-074454	Oryctolagus cuniculus	94.78	1.00e-177	615.00
IUUC-Ola-086630	Oryzias latipes	57.73	1.00e-105	376.00
IUUC-Oga-088361	Otolemur garnettii	96.86	4.00e-175	606.00
IUUC-Oar-089950	Ovis aries	80.18	2.00e-139	488.00
IUUC-Ptr-090785	Pan troglodytes	85.04	1.00e-170	592.00
IUUC-Pan-092344	Papio anubis	97.77	0.00e+00	639.00
IUUC-Psi-093856	Pelodiscus sinensis	65.24	1.00e-130	459.00
IUUC-Pfo-096596	Poecilia formosa	58.31	3.00e-114	404.00
IUUC-Pab-098322	Pongo abelii	93.31	2.00e-172	598.00
IUUC-Pca-100385	Procavia capensis	76.42	7.00e-120	422.00
IUUC-Pva-102962	Pteropus vampyrus	63.72	3.00e-118	418.00
IUUC-Rno-105134	Rattus norvegicus	94.75	0.00e+00	672.00
IUUC-Sha-106768	Sarcophilus harrisii	96.35	2.00e-178	618.00
IUUC-Ssc-116332	Sus scrofa	64.63	5.00e-128	451.00
IUUC-Tgu-117494	Taeniopygia guttata	80.43	4.00e-158	550.00
IUUC-Tru-118744	Takifugu rubripes	61.83	3.00e-119	421.00
IUUC-Tsy-119352	Tarsius syrichta	64.94	1.00e-128	452.00
IUUC-Tni-120413	Tetraodon nigroviridis	62.30	3.00e-118	417.00
IUUC-Ttr-129063	Tursiops truncatus	94.46	0.00e+00	631.00
IUUC-Vpa-130699	Vicugna pacos	64.63	8.00e-128	450.00
IUUC-Xtr-132207	Xenopus tropicalis	63.53	9.00e-126	443.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence