iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gac-042396

UUCD1 version

UUC-GaA-01267

Ensembl Protein ID

ENSGACP00000014209.1

UniProt Accession

G3P9D5; G3P9D5_GASAC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGACG00000010722.1	ENSGACT00000014234.1	ENSGACP00000014209.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.70e-18	67.4	532	915

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 9    tCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.gyeqqDaqEfl 96
             Y+N+++Q+L++++++r l+ +   + +++      + +l+++l  lf+ l  s+    + +++l+a++++ e    g    D+ E +
   Q: 532  NAYCNCMIQVLYFLEPIRYLVQN---HLCQK------EFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASAlGLILADSDEQT 611
           56****************99999...55654......57*******************************9999855666666666655 PP
   S: 97   .aflldqleeelkk....eknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgke 180
            +  l +l ++ ++    + +++++e+e+ +  +    +++   ++++s i +lF+ +++++  c +c+++++r +  l ++++ p+++
   Q: 612  gKARLGRLIQSWNRfiltQLHQETQEQEGPQ--AYRGASSSTLGSSGESAIGKLFGCEVENSSLC-RCGKETVRSSLSLLFTMHYPEQN 697
           1334566666665544323333333333333..4445567888999*******************.8******************9888 PP
   S: 181  etkke....slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfc 265
           +++k+    ++ ++L++    e+ +   + +ce+c+k+q ++++  ++ lP+vL+++    s +e+     k++ ++ f++ ++ +  +
   Q: 698  SQEKTvkeyDFAEILKKSICLEQST---QAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSAKEA--EFWKVQAEYAFNKAIKKEA-M 780
           7655555567777777766666555...69*****************************9977665..4458999999998888774.4 PP
   S: 266  ts..............................................................peekqke.....kkkYeLiavvvHs 287
           +                                                                     e        Y+L+  v H 
   Q: 781  EPpkpkepplpmptewcldmegitfdtraedlrhvwiplslkmsisksqgleisswpegeelssA-----EeeeegASVYDLVVTVPHI 864
           44355566666666666666666666666666666666666666666666666666666555552.....0555559************ PP
   S: 288  G.slssGHYvayvkn...........ekgkWllfdDskVtevkeeevleet 326
                +G  va++k            ++++W+lf+D  +++++++e  ++ 
   Q: 865  LdARTGGNLVAHIKVgetyhqrkegvTHQQWYLFNDFLIEPIDKTEAAQFD 915
           *99999*********999988877777888************999988865 PP

Organism

Gasterosteus aculeatus

Protein Sequence
(Fasta)

LLMMNFDGLD AGMGDYPPRL HGTLDAGMEP SMDPHLNPSL MQGVELDPEG LSGTGTEPVH 60
LMEGMFSELH SAVSEVGIPV TATHFDLQEE MLWMGNHRGH VTSFFGPTMG RHSSFQAHAS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTGTTGTT ATTGTGAGTG AAGTGAGCAT GAAGTGAGCA TGGACTTCTA TCTTATCAAG 60
AGAAGAGGTT GGTGTAAACC TCATATTAAT ATTCCGAGTC ATTCAGTAAT CATGAAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR013520--Exonuclease_RNaseT/DNA_pol3
IPR030843--PAN2
IPR028881--PAN2_dom
IPR012337--RNaseH-like_dom
IPR028889--USP_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

PROSITE

PS50235--USP_3

Pfam

PF00929--RNase_T
PF13423--UCH_1

SMART

SM00479--EXOIII

Gene Ontology

GO:0031251--C:PAN complex
GO:0003676--F:nucleic acid binding
GO:0004535--F:poly(A)-specific ribonuclease activity
GO:0006397--P:mRNA processing
GO:0000289--P:nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001273	Ailuropoda melanoleuca	74.73	0.00e+00	1786.00
IUUC-Apl-003500	Anas platyrhynchos	76.30	0.00e+00	1690.00
IUUC-Aca-004930	Anolis carolinensis	75.02	0.00e+00	1826.00
IUUC-Acl-008214	Aspergillus clavatus	30.98	9.00e-151	528.00
IUUC-Afu-009112	Aspergillus fumigatus	28.22	2.00e-75	277.00
IUUC-Ang-009531	Aspergillus niger	30.96	1.00e-143	504.00
IUUC-Ame-011259	Astyanax mexicanus	86.66	0.00e+00	2099.00
IUUC-Bta-012371	Bos taurus	74.73	0.00e+00	1777.00
IUUC-Bci-013684	Botrytis cinerea	44.33	5.00e-68	253.00
IUUC-Cja-019297	Callithrix jacchus	72.64	0.00e+00	1736.00
IUUC-Cfa-020489	Canis familiaris	74.65	0.00e+00	1772.00
IUUC-Cpo-022392	Cavia porcellus	74.98	0.00e+00	1811.00
IUUC-Csa-023220	Chlorocebus sabaeus	74.16	0.00e+00	1778.00
IUUC-Csv-025841	Ciona savignyi	46.11	0.00e+00	889.00
IUUC-Cgl-026534	Colletotrichum gloeosporioides	29.53	2.00e-87	317.00
IUUC-Cne-026932	Cryptococcus neoformans	42.55	3.00e-68	253.00
IUUC-Dre-028482	Danio rerio	83.95	0.00e+00	2040.00
IUUC-Dno-029398	Dasypus novemcinctus	74.69	0.00e+00	1783.00
IUUC-Dor-030307	Dipodomys ordii	70.77	0.00e+00	1007.00
IUUC-Dme-032111	Drosophila melanogaster	40.56	0.00e+00	870.00
IUUC-Eca-033985	Equus caballus	74.98	0.00e+00	1781.00
IUUC-Eeu-034928	Erinaceus europaeus	75.12	5.00e-174	605.00
IUUC-Fca-035587	Felis catus	74.98	0.00e+00	1807.00
IUUC-Fal-037587	Ficedula albicollis	76.00	0.00e+00	1791.00
IUUC-Fso-038133	Fusarium solani	30.23	7.00e-126	445.00
IUUC-Gmo-039076	Gadus morhua	87.11	0.00e+00	2112.00
IUUC-Ggr-039957	Gaeumannomyces graminis	28.90	5.00e-74	273.00
IUUC-Gga-040948	Gallus gallus	76.40	0.00e+00	1837.00
IUUC-Ggo-045412	Gorilla gorilla	74.32	0.00e+00	1779.00
IUUC-Hsa-046076	Homo sapiens	74.32	0.00e+00	1780.00
IUUC-Itr-048143	Ictidomys tridecemlineatus	69.99	0.00e+00	1615.00
IUUC-Kpa-049178	Komagataella pastoris	41.12	4.00e-65	243.00
IUUC-Lch-050279	Latimeria chalumnae	68.19	0.00e+00	1635.00
IUUC-Loc-052872	Lepisosteus oculatus	85.00	0.00e+00	2049.00
IUUC-Lma-052986	Leptosphaeria maculans	30.56	5.00e-92	332.00
IUUC-Laf-054181	Loxodonta africana	72.56	0.00e+00	1743.00
IUUC-Mcc-054812	Macaca mulatta	74.24	0.00e+00	1770.00
IUUC-Meu-056325	Macropus eugenii	75.43	0.00e+00	1815.00
IUUC-Mor-057246	Magnaporthe oryzae	27.07	1.00e-61	231.00
IUUC-Mpo-057464	Magnaporthe poae	29.50	2.00e-70	261.00
IUUC-Mla-058911	Melampsora laricipopulina	41.02	9.00e-69	255.00
IUUC-Mga-059335	Meleagris gallopavo	77.06	0.00e+00	1808.00
IUUC-Mvi-060461	Microbotryum violaceum	32.91	1.00e-139	491.00
IUUC-Mmr-060636	Microcebus murinus	74.49	0.00e+00	1774.00
IUUC-Mmu-063503	Mus musculus	73.93	0.00e+00	1774.00
IUUC-Mpu-066670	Mustela putorius furo	74.98	0.00e+00	1782.00
IUUC-Mlu-068119	Myotis lucifugus	74.57	0.00e+00	1827.00
IUUC-Nfi-068398	Neosartorya fischeri	29.24	1.00e-84	308.00
IUUC-Ncr-068927	Neurospora crassa	27.85	3.00e-115	410.00
IUUC-Nle-069651	Nomascus leucogenys	71.38	0.00e+00	1694.00
IUUC-Opr-070614	Ochotona princeps	74.22	0.00e+00	1750.00
IUUC-Ont-072433	Oreochromis niloticus	90.11	0.00e+00	2202.00
IUUC-Oan-073283	Ornithorhynchus anatinus	66.37	0.00e+00	1270.00
IUUC-Ocu-074401	Oryctolagus cuniculus	74.08	0.00e+00	1775.00
IUUC-Ola-087522	Oryzias latipes	89.79	0.00e+00	2135.00
IUUC-Oga-088226	Otolemur garnettii	73.63	0.00e+00	1788.00
IUUC-Oar-089241	Ovis aries	74.73	0.00e+00	1805.00
IUUC-Pan-092297	Papio anubis	76.28	0.00e+00	1615.00
IUUC-Psi-094043	Pelodiscus sinensis	72.24	0.00e+00	1696.00
IUUC-Pma-094394	Petromyzon marinus	66.55	0.00e+00	1515.00
IUUC-Pno-095053	Phaeosphaeria nodorum	30.13	3.00e-76	280.00
IUUC-Ppa-095188	Physcomitrella patens	32.54	2.00e-158	553.00
IUUC-Pfo-097517	Poecilia formosa	90.53	0.00e+00	2197.00
IUUC-Pca-100471	Procavia capensis	76.37	0.00e+00	1712.00
IUUC-Pva-102805	Pteropus vampyrus	73.28	0.00e+00	1409.00
IUUC-Pte-104021	Pyrenophora teres	30.67	1.00e-92	335.00
IUUC-Pyt-104682	Pyrenophora triticirepentis	30.39	2.00e-91	331.00
IUUC-Rno-105471	Rattus norvegicus	74.36	0.00e+00	1790.00
IUUC-Sce-106235	Saccharomyces cerevisiae	37.89	2.00e-57	218.00
IUUC-Sha-106883	Sarcophilus harrisii	76.24	0.00e+00	1699.00
IUUC-Spo-108169	Schizosaccharomyces pombe	49.32	2.00e-72	267.00
IUUC-Sar-113323	Sorex araneus	75.64	0.00e+00	1343.00
IUUC-Sre-115075	Sporisorium reilianum	47.75	1.00e-57	218.00
IUUC-Ssc-116363	Sus scrofa	73.83	0.00e+00	1786.00
IUUC-Tru-118427	Takifugu rubripes	90.74	0.00e+00	2226.00
IUUC-Tni-120218	Tetraodon nigroviridis	90.37	0.00e+00	2228.00
IUUC-Tre-122177	Trichoderma reesei	31.45	9.00e-153	534.00
IUUC-Tme-127176	Tuber melanosporum	44.23	6.00e-67	249.00
IUUC-Tbe-127641	Tupaia belangeri	65.20	1.00e-174	607.00
IUUC-Ttr-128888	Tursiops truncatus	75.23	0.00e+00	1115.00
IUUC-Uma-129361	Ustilago maydis	49.55	1.00e-59	225.00
IUUC-Xtr-132811	Xenopus tropicalis	73.03	0.00e+00	1754.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence