iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093062

Ensembl Protein ID

ENSPSIP00000005740.1

UniProt Accession

K7FCI0; K7FCI0_PELSI

Genbank Protein ID

ENSPSIP00000005740

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01038940

Gene Name

RNF13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000005312.1	ENSPSIT00000005774.1	ENSPSIP00000005740.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.20e-09	36.8	240	282

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++++dg  +++lpC H++h +C+  w     +++++ +CP+C+
   Q: 240  CAICLDEYEDGdkLRILPCSHAYHCKCVDPW-----LTKTKKTCPVCK 282
           ********66666******************.....899********7 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MLLSIGMLML SATQIYTILT VQLFAFLNLL PVEADILAYN FENGTQTFDD LPARFGYRLP 60
TEGLKGFLIN SKPENACEPI APPPLKDNVS NAFIVLIRRL DCNFDVKVLN AQRAGYKAAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGGGACAA ACCCATTTGT CATGGAGTCG CTGTAGATTG GTCCCTGCGC TCGGCCCGCA 60
GGTAAGAGCT GCCTTTGCCG CGGTCGGTGA TGTGGGGAAA GGGGCGGGGG GCGCTTGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF02225--PA
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0031902--C:late endosome membrane
GO:0005765--C:lysosomal membrane
GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

KEGG

pss:102459618

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001909	Ailuropoda melanoleuca	91.60	4.00e-179	620.00
IUUC-Atr-003055	Amborella trichopoda	31.45	1.00e-31	130.00
IUUC-Apl-004022	Anas platyrhynchos	93.70	3.00e-179	620.00
IUUC-Aca-004641	Anolis carolinensis	90.10	2.00e-172	598.00
IUUC-Aly-006519	Arabidopsis lyrata	31.77	2.00e-32	132.00
IUUC-Ath-007212	Arabidopsis thaliana	33.67	3.00e-32	131.00
IUUC-Acl-008256	Aspergillus clavatus	58.33	6.00e-14	71.20
IUUC-Afl-008548	Aspergillus flavus	60.00	2.00e-13	69.70
IUUC-Afu-008977	Aspergillus fumigatus	60.00	3.00e-13	69.30
IUUC-Ani-009337	Aspergillus nidulans	46.30	3.00e-13	68.20
IUUC-Ang-009734	Aspergillus niger	60.00	7.00e-14	71.60
IUUC-Aor-010134	Aspergillus oryzae	44.00	6.00e-14	71.20
IUUC-Ame-010635	Astyanax mexicanus	71.82	2.00e-140	491.00
IUUC-Bgr-012131	Blumeria graminis	50.00	1.00e-12	68.20
IUUC-Bta-012593	Bos taurus	91.34	0.00e+00	653.00
IUUC-Bci-013936	Botrytis cinerea	35.14	3.00e-13	69.70
IUUC-Bra-017689	Brassica rapa	32.74	2.00e-33	136.00
IUUC-Cel-018181	Caenorhabditis elegans	33.20	6.00e-31	128.00
IUUC-Cja-019353	Callithrix jacchus	90.55	4.00e-177	613.00
IUUC-Cfa-020234	Canis familiaris	91.86	2.00e-179	620.00
IUUC-Cpo-021602	Cavia porcellus	88.92	7.00e-152	529.00
IUUC-Cre-022983	Chlamydomonas reinhardtii	37.93	1.00e-10	60.80
IUUC-Csa-023201	Chlorocebus sabaeus	91.60	3.00e-179	620.00
IUUC-Cho-024954	Choloepus hoffmanni	76.90	1.00e-143	502.00
IUUC-Cin-025554	Ciona intestinalis	44.03	2.00e-62	232.00
IUUC-Csv-025959	Ciona savignyi	43.68	2.00e-51	196.00
IUUC-Cne-026954	Cryptococcus neoformans	53.19	6.00e-13	68.90
IUUC-Dre-028744	Danio rerio	77.54	2.00e-138	485.00
IUUC-Dno-029675	Dasypus novemcinctus	90.55	5.00e-178	616.00
IUUC-Dor-030791	Dipodomys ordii	75.33	1.00e-132	465.00
IUUC-Dse-031406	Dothistroma septosporum	43.33	1.00e-12	68.60
IUUC-Dme-031765	Drosophila melanogaster	41.49	4.00e-52	198.00
IUUC-Ete-032577	Echinops telfairi	83.65	4.00e-141	493.00
IUUC-Eca-034148	Equus caballus	91.60	6.00e-178	616.00
IUUC-Eeu-034552	Erinaceus europaeus	90.55	2.00e-173	601.00
IUUC-Fca-036021	Felis catus	92.39	2.00e-179	620.00
IUUC-Fal-037621	Ficedula albicollis	93.44	2.00e-176	611.00
IUUC-Gmo-039485	Gadus morhua	78.50	3.00e-134	471.00
IUUC-Gga-041166	Gallus gallus	94.23	2.00e-180	624.00
IUUC-Gac-042124	Gasterosteus aculeatus	76.25	5.00e-130	457.00
IUUC-Ggo-045344	Gorilla gorilla	91.34	1.00e-178	618.00
IUUC-Hsa-045960	Homo sapiens	91.34	1.00e-178	618.00
IUUC-Hvu-047136	Hordeum vulgare	35.18	1.00e-29	124.00
IUUC-Itr-048327	Ictidomys tridecemlineatus	90.29	3.00e-178	617.00
IUUC-Lch-050635	Latimeria chalumnae	83.12	7.00e-137	479.00
IUUC-Lpe-051192	Leersia perrieri	34.40	2.00e-29	123.00
IUUC-Loc-052869	Lepisosteus oculatus	79.82	7.00e-145	506.00
IUUC-Lma-053199	Leptosphaeria maculans	43.06	3.00e-14	72.80
IUUC-Laf-054477	Loxodonta africana	89.50	3.00e-174	603.00
IUUC-Mcc-055232	Macaca mulatta	91.60	3.00e-179	620.00
IUUC-Meu-056237	Macropus eugenii	82.35	2.00e-117	414.00
IUUC-Mpo-057522	Magnaporthe poae	44.44	2.00e-13	70.10
IUUC-Mtr-058129	Medicago truncatula	33.46	2.00e-28	120.00
IUUC-Mla-059171	Melampsora laricipopulina	36.14	1.00e-11	64.30
IUUC-Mga-059780	Meleagris gallopavo	93.96	3.00e-180	624.00
IUUC-Mvi-060468	Microbotryum violaceum	46.00	3.00e-12	67.00
IUUC-Mmr-061384	Microcebus murinus	91.89	1.00e-173	602.00
IUUC-Mdo-062781	Monodelphis domestica	91.10	8.00e-179	619.00
IUUC-Mmu-063727	Mus musculus	87.66	3.00e-166	577.00
IUUC-Mac-065216	Musa acuminata	32.64	5.00e-30	125.00
IUUC-Mpu-066497	Mustela putorius furo	92.13	2.00e-179	620.00
IUUC-Mlu-067654	Myotis lucifugus	92.27	4.00e-111	393.00
IUUC-Nfi-068514	Neosartorya fischeri	44.78	2.00e-13	69.70
IUUC-Nle-069368	Nomascus leucogenys	91.34	1.00e-178	618.00
IUUC-Opr-070934	Ochotona princeps	64.30	2.00e-106	378.00
IUUC-Ont-071868	Oreochromis niloticus	76.18	1.00e-128	452.00
IUUC-Oan-072733	Ornithorhynchus anatinus	87.54	5.00e-106	376.00
IUUC-Ocu-074083	Oryctolagus cuniculus	90.03	4.00e-177	613.00
IUUC-Oba-075841	Oryza barthii	33.44	4.00e-28	119.00
IUUC-Obr-076703	Oryza brachyantha	35.82	2.00e-31	129.00
IUUC-Ogl-077861	Oryza glaberrima	35.46	7.00e-31	128.00
IUUC-Ogu-078205	Oryza glumaepatula	35.18	2.00e-28	120.00
IUUC-Oin-080138	Oryza indica	32.21	3.00e-29	122.00
IUUC-Olo-081024	Oryza longistaminata	34.04	9.00e-30	125.00
IUUC-Ome-081844	Oryza meridionalis	35.46	8.00e-31	128.00
IUUC-Oni-082382	Oryza nivara	31.91	2.00e-30	127.00
IUUC-Opu-083162	Oryza punctata	36.17	4.00e-31	129.00
IUUC-Oru-085122	Oryza rufipogon	32.78	1.00e-29	124.00
IUUC-Osa-086175	Oryza sativa	35.46	6.00e-31	128.00
IUUC-Ola-086440	Oryzias latipes	75.33	1.00e-116	412.00
IUUC-Oga-088291	Otolemur garnettii	86.79	2.00e-162	564.00
IUUC-Oar-089911	Ovis aries	91.08	0.00e+00	651.00
IUUC-Ptr-091166	Pan troglodytes	91.34	1.00e-178	618.00
IUUC-Pan-092154	Papio anubis	91.60	3.00e-179	620.00
IUUC-Pma-094545	Petromyzon marinus	73.21	5.00e-26	108.00
IUUC-Pno-094907	Phaeosphaeria nodorum	47.62	4.00e-14	72.00
IUUC-Ppa-095928	Physcomitrella patens	34.09	2.00e-31	129.00
IUUC-Pfo-097232	Poecilia formosa	77.43	7.00e-133	466.00
IUUC-Pab-097909	Pongo abelii	91.08	0.00e+00	633.00
IUUC-Pop-098937	Populus trichocarpa	29.86	9.00e-27	114.00
IUUC-Pca-100724	Procavia capensis	74.86	3.00e-135	474.00
IUUC-Ppe-101605	Prunus persica	30.94	2.00e-27	115.00
IUUC-Pva-102624	Pteropus vampyrus	85.04	1.00e-157	548.00
IUUC-Pgr-103420	Puccinia graminis	55.32	2.00e-12	68.20
IUUC-Ptt-103943	Puccinia triticina	31.36	9.00e-12	64.70
IUUC-Rno-105109	Rattus norvegicus	84.25	2.00e-157	547.00
IUUC-Sha-107563	Sarcophilus harrisii	91.10	6.00e-174	603.00
IUUC-Spo-108083	Schizosaccharomyces pombe	25.75	1.00e-14	73.60
IUUC-Smo-109274	Selaginella moellendorffii	36.08	5.00e-32	130.00
IUUC-Sit-110628	Setaria italica	34.75	3.00e-32	132.00
IUUC-Sly-110842	Solanum lycopersicum	29.66	6.00e-29	121.00
IUUC-Stu-112408	Solanum tuberosum	30.32	9.00e-27	114.00
IUUC-Sre-115097	Sporisorium reilianum	51.02	9.00e-13	68.60
IUUC-Ssc-116043	Sus scrofa	91.60	3.00e-178	617.00
IUUC-Tgu-116908	Taeniopygia guttata	93.98	1.00e-178	618.00
IUUC-Tru-118219	Takifugu rubripes	76.73	2.00e-133	468.00
IUUC-Tsy-119333	Tarsius syrichta	91.60	7.00e-178	615.00
IUUC-Tni-120332	Tetraodon nigroviridis	71.49	1.00e-88	319.00
IUUC-Tca-121333	Theobroma cacao	31.56	2.00e-26	112.00
IUUC-Tvi-122495	Trichoderma virens	41.67	2.00e-12	67.00
IUUC-Tme-127069	Tuber melanosporum	60.00	5.00e-13	68.60
IUUC-Tbe-127859	Tupaia belangeri	81.32	2.00e-160	558.00
IUUC-Ttr-129219	Tursiops truncatus	82.15	6.00e-151	526.00
IUUC-Uma-129559	Ustilago maydis	52.08	1.00e-12	68.20
IUUC-Vda-129899	Verticillium dahliae	43.40	5.00e-13	68.90
IUUC-Vpa-130314	Vicugna pacos	88.98	8.00e-168	582.00
IUUC-Vvi-131355	Vitis vinifera	34.10	3.00e-29	122.00
IUUC-Xtr-132114	Xenopus tropicalis	76.67	2.00e-134	471.00
IUUC-Xma-133474	Xiphophorus maculatus	77.43	5.00e-133	467.00
IUUC-Yli-134442	Yarrowia lipolytica	44.68	3.00e-12	65.90
IUUC-Zma-134793	Zea mays	33.00	2.00e-31	129.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence