iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-027658

Ensembl Protein ID

ENSDARP00000085270.4

UniProt Accession

B0S6Y2; B0S6Y2_DANRE

Genbank Protein ID

ENSDARP00000085270

Protein Name

Zinc finger, C3HC-type-containing 1

Genbank Nucleotide ID

BX571796

Gene Name

zc3hc1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000062651.5	ENSDART00000090837.4	ENSDARP00000085270.4

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	45.79	8.00e-103	372.00	IUUC-Hsa-046932

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Danio rerio

Protein Sequence
(Fasta)

MAALGSRANR PENGEKQTKS PLVSPLKVRE LLNEGVASED SVLNCSQQDP NTASPNGLGK 60
APCEAANKEA FFNRVESYSC LKWAGKPSVL SPLRCARYGW INVDCDMLKC CSCQAFLCAS 120

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Nucleotide Sequence
(Fasta)

TTTATCTTTT GCTGCGGGAG GGTTTAGAGA CAGACACCAA ACATGGCGGC GCTTGGCAGC 60
CGCGCAAATC GGCCAGAAAA CGGCGAAAAA CAAACCAAAT CTCCTCTTGT ATCGCCCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR013909--NIPA/Rsm1
IPR012935--Znf_C3HC-like

Pfam

PF08600--Rsm1
PF07967--zf-C3HC

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002290	Ailuropoda melanoleuca	45.71	5.00e-100	358.00
IUUC-Atr-003126	Amborella trichopoda	25.12	2.00e-12	68.20
IUUC-Aca-004720	Anolis carolinensis	46.20	8.00e-105	374.00
IUUC-Ath-006863	Arabidopsis thaliana	27.18	4.00e-15	76.30
IUUC-Bta-012342	Bos taurus	45.94	2.00e-103	370.00
IUUC-Bra-016709	Brassica rapa	24.04	9.00e-12	66.20
IUUC-Cja-019724	Callithrix jacchus	45.51	3.00e-99	355.00
IUUC-Cfa-020918	Canis familiaris	47.55	2.00e-105	375.00
IUUC-Cpo-022028	Cavia porcellus	45.33	3.00e-109	389.00
IUUC-Csa-023238	Chlorocebus sabaeus	41.94	5.00e-62	231.00
IUUC-Cho-024962	Choloepus hoffmanni	48.53	3.00e-102	365.00
IUUC-Dno-028891	Dasypus novemcinctus	44.89	1.00e-105	377.00
IUUC-Dse-031338	Dothistroma septosporum	20.76	8.00e-05	42.00
IUUC-Eca-033965	Equus caballus	44.79	6.00e-92	331.00
IUUC-Eeu-034997	Erinaceus europaeus	53.80	2.00e-42	167.00
IUUC-Fca-036112	Felis catus	45.36	9.00e-100	357.00
IUUC-Gmo-039188	Gadus morhua	55.42	6.00e-151	527.00
IUUC-Ggr-039778	Gaeumannomyces graminis	19.82	4.00e-05	43.50
IUUC-Gga-040879	Gallus gallus	44.18	2.00e-98	352.00
IUUC-Gac-041886	Gasterosteus aculeatus	57.88	1.00e-147	516.00
IUUC-Gma-043122	Glycine max	29.52	2.00e-18	87.80
IUUC-Ggo-045489	Gorilla gorilla	45.51	1.00e-99	357.00
IUUC-Hsa-046932	Homo sapiens	45.59	2.00e-100	359.00
IUUC-Itr-048776	Ictidomys tridecemlineatus	45.35	5.00e-104	371.00
IUUC-Lch-050627	Latimeria chalumnae	47.10	3.00e-98	352.00
IUUC-Loc-052294	Lepisosteus oculatus	61.40	2.00e-149	522.00
IUUC-Laf-053461	Loxodonta africana	45.62	3.00e-100	358.00
IUUC-Mcc-055411	Macaca mulatta	43.99	1.00e-90	327.00
IUUC-Meu-056049	Macropus eugenii	47.58	7.00e-109	387.00
IUUC-Mga-059941	Meleagris gallopavo	42.14	3.00e-86	312.00
IUUC-Mmr-061230	Microcebus murinus	44.74	8.00e-96	344.00
IUUC-Mdo-062254	Monodelphis domestica	36.50	4.00e-70	258.00
IUUC-Mmu-063183	Mus musculus	46.96	4.00e-103	368.00
IUUC-Mpu-066430	Mustela putorius furo	47.54	3.00e-98	352.00
IUUC-Mlu-067318	Myotis lucifugus	44.69	6.00e-93	334.00
IUUC-Nle-069871	Nomascus leucogenys	45.49	8.00e-100	357.00
IUUC-Opr-071023	Ochotona princeps	48.99	1.00e-57	217.00
IUUC-Ont-071854	Oreochromis niloticus	62.38	3.00e-153	535.00
IUUC-Ocu-074725	Oryctolagus cuniculus	45.65	6.00e-104	371.00
IUUC-Ogl-076943	Oryza glaberrima	28.64	4.00e-17	84.00
IUUC-Ogu-078596	Oryza glumaepatula	28.14	5.00e-17	83.20
IUUC-Ome-081625	Oryza meridionalis	28.14	1.00e-16	82.00
IUUC-Oru-084191	Oryza rufipogon	28.14	7.00e-17	83.20
IUUC-Osa-085482	Oryza sativa	28.14	5.00e-17	83.20
IUUC-Ola-086385	Oryzias latipes	59.46	8.00e-155	540.00
IUUC-Oga-089112	Otolemur garnettii	40.61	3.00e-81	296.00
IUUC-Oar-089630	Ovis aries	46.65	1.00e-101	363.00
IUUC-Ptr-091222	Pan troglodytes	45.59	6.00e-101	361.00
IUUC-Pan-092930	Papio anubis	44.08	3.00e-94	339.00
IUUC-Psi-093330	Pelodiscus sinensis	44.69	1.00e-82	300.00
IUUC-Ppa-095707	Physcomitrella patens	25.25	5.00e-17	83.60
IUUC-Pfo-096184	Poecilia formosa	57.34	2.00e-145	509.00
IUUC-Pab-097781	Pongo abelii	42.48	3.00e-82	299.00
IUUC-Pop-099933	Populus trichocarpa	22.04	3.00e-09	57.80
IUUC-Pca-101038	Procavia capensis	46.71	2.00e-96	346.00
IUUC-Pva-102707	Pteropus vampyrus	43.18	3.00e-91	329.00
IUUC-Rno-105631	Rattus norvegicus	46.12	7.00e-105	374.00
IUUC-Sha-106923	Sarcophilus harrisii	48.76	3.00e-98	352.00
IUUC-Smo-109192	Selaginella moellendorffii	26.67	1.00e-19	91.70
IUUC-Sly-111755	Solanum lycopersicum	26.04	2.00e-11	65.10
IUUC-Sar-113436	Sorex araneus	44.13	3.00e-87	315.00
IUUC-Ssc-115977	Sus scrofa	43.20	1.00e-59	223.00
IUUC-Tni-120167	Tetraodon nigroviridis	55.18	1.00e-136	479.00
IUUC-Tbe-127998	Tupaia belangeri	38.93	2.00e-66	246.00
IUUC-Ttr-128617	Tursiops truncatus	47.26	9.00e-104	370.00
IUUC-Vda-129867	Verticillium dahliae	22.67	3.00e-07	50.40
IUUC-Xtr-132321	Xenopus tropicalis	42.64	3.00e-90	325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence