iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-022512

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02007412

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000008475.3	ENSCPOT00000008552.2	ENSCPOP00000007618.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-13	49.1	166	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt +  +
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTAKEAQ 204
           8**********98559*****************998765 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MERATQLAVP LGQTEVFQAL QRLHMTIFSQ SVSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKKPVV TFQAHDGPVY SMVSTDRHLL SAGDGEVKAW LWAEILKKGC KEVWRRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAACGTG CTACGCAGCT TGCGGTGCCT CTGGGTCAGG TGAGCCGACG TGGGCCTGGT 60
GCTTTCTGGG GTTTGGAGTC TCTGCATGGC TTGGATGGAA TGGGCAAGGG ATAACGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.84	2.00e-29	122.00
IUUC-Aml-001693	Ailuropoda melanoleuca	95.31	9.00e-179	619.00
IUUC-Atr-002699	Amborella trichopoda	29.60	1.00e-23	103.00
IUUC-Aca-004231	Anolis carolinensis	70.95	8.00e-128	449.00
IUUC-Aly-006385	Arabidopsis lyrata	28.71	3.00e-27	115.00
IUUC-Ath-006723	Arabidopsis thaliana	28.71	2.00e-27	116.00
IUUC-Ame-010813	Astyanax mexicanus	65.12	6.00e-89	320.00
IUUC-Bta-013458	Bos taurus	95.89	5.00e-180	623.00
IUUC-Bdi-014935	Brachypodium distachyon	29.44	3.00e-29	122.00
IUUC-Bol-015442	Brassica oleracea	29.03	1.00e-27	117.00
IUUC-Bra-017807	Brassica rapa	31.18	7.00e-28	117.00
IUUC-Cja-019061	Callithrix jacchus	95.61	1.00e-178	618.00
IUUC-Cfa-021146	Canis familiaris	95.31	8.00e-179	619.00
IUUC-Csa-023055	Chlorocebus sabaeus	95.01	4.00e-180	623.00
IUUC-Cho-024693	Choloepus hoffmanni	95.88	3.00e-99	353.00
IUUC-Cin-025181	Ciona intestinalis	36.02	2.00e-57	216.00
IUUC-Csv-025852	Ciona savignyi	35.67	2.00e-49	189.00
IUUC-Dre-028221	Danio rerio	59.63	1.00e-118	419.00
IUUC-Dno-029200	Dasypus novemcinctus	91.53	6.00e-89	319.00
IUUC-Dor-030863	Dipodomys ordii	94.43	4.00e-178	616.00
IUUC-Dme-032016	Drosophila melanogaster	30.11	2.00e-37	149.00
IUUC-Eca-034363	Equus caballus	96.19	0.00e+00	625.00
IUUC-Fca-036546	Felis catus	95.31	2.00e-179	620.00
IUUC-Gmo-038513	Gadus morhua	56.46	2.00e-108	385.00
IUUC-Gac-042606	Gasterosteus aculeatus	56.83	1.00e-111	396.00
IUUC-Gma-043171	Glycine max	28.86	5.00e-32	131.00
IUUC-Ggo-044877	Gorilla gorilla	96.19	0.00e+00	628.00
IUUC-Hsa-045813	Homo sapiens	96.19	0.00e+00	628.00
IUUC-Hvu-047782	Hordeum vulgare	31.08	2.00e-20	91.70
IUUC-Itr-047876	Ictidomys tridecemlineatus	96.77	0.00e+00	629.00
IUUC-Lch-049506	Latimeria chalumnae	64.44	2.00e-120	425.00
IUUC-Lpe-051203	Leersia perrieri	30.51	1.00e-24	107.00
IUUC-Loc-052451	Lepisosteus oculatus	51.23	2.00e-89	322.00
IUUC-Laf-053864	Loxodonta africana	94.13	3.00e-176	610.00
IUUC-Mcc-055705	Macaca mulatta	88.02	4.00e-154	537.00
IUUC-Meu-055926	Macropus eugenii	90.52	7.00e-157	546.00
IUUC-Mtr-058556	Medicago truncatula	29.13	1.00e-31	130.00
IUUC-Mmr-060836	Microcebus murinus	95.60	2.00e-180	624.00
IUUC-Mdo-062534	Monodelphis domestica	90.52	7.00e-156	543.00
IUUC-Mmu-063560	Mus musculus	94.72	3.00e-178	617.00
IUUC-Mac-065134	Musa acuminata	27.02	9.00e-26	110.00
IUUC-Mpu-066031	Mustela putorius furo	96.48	0.00e+00	626.00
IUUC-Mlu-068051	Myotis lucifugus	91.79	1.00e-169	588.00
IUUC-Nle-069080	Nomascus leucogenys	95.60	4.00e-180	623.00
IUUC-Opr-070787	Ochotona princeps	90.03	3.00e-166	577.00
IUUC-Ont-071952	Oreochromis niloticus	55.59	3.00e-110	391.00
IUUC-Oan-073334	Ornithorhynchus anatinus	83.09	2.00e-119	421.00
IUUC-Oba-075175	Oryza barthii	30.39	2.00e-25	109.00
IUUC-Obr-076393	Oryza brachyantha	30.94	2.00e-25	109.00
IUUC-Ogl-077603	Oryza glaberrima	35.59	8.00e-19	87.40
IUUC-Ogu-078211	Oryza glumaepatula	31.07	2.00e-25	110.00
IUUC-Oin-079554	Oryza indica	30.39	8.00e-26	110.00
IUUC-Olo-080922	Oryza longistaminata	30.34	2.00e-23	103.00
IUUC-Ome-081127	Oryza meridionalis	23.20	1.00e-11	64.70
IUUC-Oni-082376	Oryza nivara	30.39	2.00e-25	110.00
IUUC-Opu-083163	Oryza punctata	29.83	6.00e-25	108.00
IUUC-Oru-084311	Oryza rufipogon	30.39	2.00e-25	109.00
IUUC-Osa-085762	Oryza sativa	35.59	1.00e-18	86.70
IUUC-Oga-088804	Otolemur garnettii	94.13	6.00e-178	616.00
IUUC-Oar-090095	Ovis aries	95.31	4.00e-179	620.00
IUUC-Ptr-090731	Pan troglodytes	96.48	0.00e+00	628.00
IUUC-Pan-092595	Papio anubis	95.61	2.00e-179	620.00
IUUC-Psi-093866	Pelodiscus sinensis	71.52	1.00e-119	422.00
IUUC-Pma-094236	Petromyzon marinus	60.49	4.00e-118	417.00
IUUC-Pfo-096095	Poecilia formosa	55.90	3.00e-106	377.00
IUUC-Pab-098385	Pongo abelii	95.60	0.00e+00	625.00
IUUC-Pop-099433	Populus trichocarpa	27.24	7.00e-29	121.00
IUUC-Pca-101119	Procavia capensis	93.61	4.00e-115	407.00
IUUC-Ppe-101677	Prunus persica	27.82	3.00e-26	112.00
IUUC-Pva-102726	Pteropus vampyrus	95.31	3.00e-179	620.00
IUUC-Rno-105576	Rattus norvegicus	95.31	2.00e-179	620.00
IUUC-Sha-106774	Sarcophilus harrisii	91.13	9.00e-158	549.00
IUUC-Sit-109988	Setaria italica	27.78	2.00e-27	116.00
IUUC-Sly-110864	Solanum lycopersicum	29.76	8.00e-28	117.00
IUUC-Sar-113060	Sorex araneus	86.31	4.00e-128	450.00
IUUC-Sbi-114699	Sorghum bicolor	29.12	4.00e-28	118.00
IUUC-Ssc-116445	Sus scrofa	95.60	4.00e-180	623.00
IUUC-Tru-117834	Takifugu rubripes	58.39	8.00e-115	406.00
IUUC-Tni-119651	Tetraodon nigroviridis	57.14	7.00e-114	403.00
IUUC-Tca-121318	Theobroma cacao	27.02	3.00e-27	115.00
IUUC-Tae-124184	Triticum aestivum	29.84	3.00e-29	122.00
IUUC-Tur-126226	Triticum urartu	30.39	2.00e-26	112.00
IUUC-Tbe-128079	Tupaia belangeri	80.15	1.00e-106	379.00
IUUC-Ttr-128391	Tursiops truncatus	90.94	2.00e-167	581.00
IUUC-Vvi-131148	Vitis vinifera	26.69	4.00e-24	105.00
IUUC-Xtr-132743	Xenopus tropicalis	62.09	3.00e-117	414.00
IUUC-Xma-133722	Xiphophorus maculatus	56.21	5.00e-111	393.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence