iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-120965

Ensembl Protein ID

EOY17994

UniProt Accession

A0A061FTI7; A0A061FTI7_THECC

Genbank Protein ID

EOY17994.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 1

Genbank Nucleotide ID

CM001888

Gene Name

TCM_042671

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042671	EOY17994	EOY17994

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-22	77.8	117	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           +s+ +++f   + ++++sG+   ++++WDl + +++
   Q: 117  ESILAISFsnKGsRYICSGGSAQVVRIWDLQRKRCI 152
           5789999*973359****************998886 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MCCEDLPSGN ALKCSIVHFQ TLMRILMNLP DPSMELLAAS GGDTVKIFDI KLEPNDPCVS 60
SYSPSPSCLV NSVKWNHTNL VVASAGEDKK ISLWRKNGQS MGTVPVAGTD SGDNIEESIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACAAAAGA AAATACCTTC TCAGATATAA CTAGCTCTCT CTTAAGATGT TGGCTGAAGG 60
TTGTCTGGAT CACATGAAAG TAGAGAATGT TTAAAAGTAA AAAAGGGCTG GTAATAAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	45.85	2.00e-103	369.00
IUUC-Aml-002397	Ailuropoda melanoleuca	32.37	4.00e-41	162.00
IUUC-Atr-002464	Amborella trichopoda	61.83	0.00e+00	879.00
IUUC-Apl-003870	Anas platyrhynchos	32.89	2.00e-40	160.00
IUUC-Aca-004925	Anolis carolinensis	32.45	9.00e-41	160.00
IUUC-Aly-005931	Arabidopsis lyrata	62.47	0.00e+00	931.00
IUUC-Ath-006681	Arabidopsis thaliana	62.25	0.00e+00	906.00
IUUC-Ame-010906	Astyanax mexicanus	31.55	4.00e-31	129.00
IUUC-Bta-013389	Bos taurus	32.10	4.00e-42	165.00
IUUC-Bdi-014340	Brachypodium distachyon	55.75	0.00e+00	777.00
IUUC-Bol-015773	Brassica oleracea	59.48	0.00e+00	883.00
IUUC-Bra-016623	Brassica rapa	59.80	0.00e+00	873.00
IUUC-Cja-019541	Callithrix jacchus	28.95	2.00e-39	156.00
IUUC-Cfa-021218	Canis familiaris	30.10	2.00e-41	163.00
IUUC-Cpo-021697	Cavia porcellus	31.66	2.00e-40	159.00
IUUC-Csa-023620	Chlorocebus sabaeus	30.59	3.00e-41	162.00
IUUC-Cho-025105	Choloepus hoffmanni	32.62	1.00e-29	124.00
IUUC-Cin-025293	Ciona intestinalis	34.02	4.00e-26	112.00
IUUC-Csv-026234	Ciona savignyi	30.00	2.00e-22	98.20
IUUC-Dre-028251	Danio rerio	33.65	1.00e-32	133.00
IUUC-Dno-029281	Dasypus novemcinctus	31.53	4.00e-39	155.00
IUUC-Ete-033113	Echinops telfairi	35.62	4.00e-38	152.00
IUUC-Eca-034230	Equus caballus	32.23	4.00e-41	162.00
IUUC-Eeu-034671	Erinaceus europaeus	32.64	3.00e-37	149.00
IUUC-Fca-035775	Felis catus	31.43	7.00e-42	164.00
IUUC-Fal-037557	Ficedula albicollis	30.17	3.00e-34	139.00
IUUC-Gmo-038586	Gadus morhua	32.04	3.00e-28	119.00
IUUC-Gga-040153	Gallus gallus	31.88	3.00e-37	149.00
IUUC-Gac-041385	Gasterosteus aculeatus	31.29	5.00e-33	135.00
IUUC-Gma-043049	Glycine max	70.17	0.00e+00	1051.00
IUUC-Ggo-044576	Gorilla gorilla	30.59	7.00e-41	161.00
IUUC-Hsa-046198	Homo sapiens	30.59	7.00e-41	161.00
IUUC-Hvu-047794	Hordeum vulgare	79.50	7.00e-77	278.00
IUUC-Lch-050561	Latimeria chalumnae	26.86	6.00e-19	88.60
IUUC-Lpe-051469	Leersia perrieri	56.55	0.00e+00	817.00
IUUC-Loc-052816	Lepisosteus oculatus	31.25	8.00e-28	117.00
IUUC-Laf-053880	Loxodonta africana	30.70	2.00e-36	146.00
IUUC-Mcc-054977	Macaca mulatta	30.59	3.00e-41	162.00
IUUC-Meu-056141	Macropus eugenii	35.58	7.00e-37	148.00
IUUC-Mtr-058441	Medicago truncatula	68.15	0.00e+00	1003.00
IUUC-Mga-060141	Meleagris gallopavo	31.51	7.00e-36	144.00
IUUC-Mmr-061201	Microcebus murinus	30.88	1.00e-40	160.00
IUUC-Mdo-061855	Monodelphis domestica	32.21	6.00e-38	151.00
IUUC-Mmu-064342	Mus musculus	29.97	4.00e-39	155.00
IUUC-Mac-065368	Musa acuminata	60.12	0.00e+00	840.00
IUUC-Mpu-066191	Mustela putorius furo	32.37	8.00e-41	161.00
IUUC-Mlu-067310	Myotis lucifugus	32.06	1.00e-40	160.00
IUUC-Nle-069990	Nomascus leucogenys	30.59	7.00e-41	161.00
IUUC-Opr-070336	Ochotona princeps	35.16	7.00e-38	151.00
IUUC-Ont-071675	Oreochromis niloticus	30.90	1.00e-35	144.00
IUUC-Oan-072772	Ornithorhynchus anatinus	35.38	2.00e-38	152.00
IUUC-Ocu-074095	Oryctolagus cuniculus	31.41	2.00e-39	156.00
IUUC-Oba-075327	Oryza barthii	58.37	0.00e+00	772.00
IUUC-Obr-076119	Oryza brachyantha	57.25	0.00e+00	796.00
IUUC-Ogl-077820	Oryza glaberrima	57.83	0.00e+00	784.00
IUUC-Ogu-078679	Oryza glumaepatula	57.98	0.00e+00	770.00
IUUC-Oin-079891	Oryza indica	58.11	0.00e+00	771.00
IUUC-Olo-080414	Oryza longistaminata	58.11	0.00e+00	721.00
IUUC-Ome-081888	Oryza meridionalis	56.46	0.00e+00	750.00
IUUC-Oni-082417	Oryza nivara	57.95	0.00e+00	787.00
IUUC-Opu-083393	Oryza punctata	57.27	0.00e+00	801.00
IUUC-Oru-084698	Oryza rufipogon	58.16	0.00e+00	772.00
IUUC-Osa-086121	Oryza sativa	57.95	0.00e+00	787.00
IUUC-Ola-086806	Oryzias latipes	31.41	5.00e-35	142.00
IUUC-Olu-087591	Ostreococcus lucimarinus	28.27	1.00e-23	103.00
IUUC-Oga-088622	Otolemur garnettii	30.90	3.00e-41	162.00
IUUC-Oar-090391	Ovis aries	32.58	8.00e-43	167.00
IUUC-Ptr-091036	Pan troglodytes	30.59	1.00e-40	160.00
IUUC-Pan-092576	Papio anubis	30.59	5.00e-41	161.00
IUUC-Psi-093450	Pelodiscus sinensis	31.65	2.00e-40	160.00
IUUC-Pma-094101	Petromyzon marinus	34.95	3.00e-35	140.00
IUUC-Ppa-095262	Physcomitrella patens	47.55	0.00e+00	661.00
IUUC-Pfo-097142	Poecilia formosa	29.44	2.00e-35	142.00
IUUC-Pab-097829	Pongo abelii	30.88	2.00e-41	162.00
IUUC-Pop-099687	Populus trichocarpa	75.09	0.00e+00	1060.00
IUUC-Pca-100217	Procavia capensis	28.89	5.00e-32	132.00
IUUC-Ppe-101502	Prunus persica	75.03	0.00e+00	1076.00
IUUC-Pva-102736	Pteropus vampyrus	30.70	5.00e-41	161.00
IUUC-Rno-104977	Rattus norvegicus	30.91	2.00e-39	156.00
IUUC-Sha-107003	Sarcophilus harrisii	31.54	4.00e-38	152.00
IUUC-Smo-109328	Selaginella moellendorffii	53.80	8.00e-152	530.00
IUUC-Sit-109796	Setaria italica	55.16	0.00e+00	768.00
IUUC-Sly-110941	Solanum lycopersicum	68.32	0.00e+00	948.00
IUUC-Stu-112314	Solanum tuberosum	67.81	0.00e+00	935.00
IUUC-Sar-112926	Sorex araneus	26.34	1.00e-29	124.00
IUUC-Sbi-113822	Sorghum bicolor	51.31	2.00e-162	565.00
IUUC-Ssc-116242	Sus scrofa	32.59	3.00e-39	154.00
IUUC-Tgu-116765	Taeniopygia guttata	30.85	2.00e-34	140.00
IUUC-Tru-117738	Takifugu rubripes	30.65	1.00e-33	137.00
IUUC-Tsy-118856	Tarsius syrichta	30.84	1.00e-36	147.00
IUUC-Tni-120871	Tetraodon nigroviridis	30.43	1.00e-35	144.00
IUUC-Tae-124830	Triticum aestivum	55.74	0.00e+00	780.00
IUUC-Tur-126840	Triticum urartu	54.42	0.00e+00	756.00
IUUC-Ttr-128551	Tursiops truncatus	30.00	1.00e-34	140.00
IUUC-Vpa-130324	Vicugna pacos	31.44	7.00e-42	164.00
IUUC-Vvi-131699	Vitis vinifera	76.30	0.00e+00	1096.00
IUUC-Xtr-131956	Xenopus tropicalis	32.69	3.00e-42	166.00
IUUC-Xma-132982	Xiphophorus maculatus	28.61	3.00e-34	139.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence