iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111181

Ensembl Protein ID

Solyc01g087670.2.1

UniProt Accession

K4AYF7; K4AYF7_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g087670.2	Solyc01g087670.2.1	Solyc01g087670.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-31	108.3	555	586
UBD/Beta-Prp	1.10e-52	179.8	91	362

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+d++t+++f  d + l+++s Dgt+++WD+
   Q: 555  GHSDRITDISFsEDgKWLLTSSMDGTLRIWDV 586
           8**********955699**************6 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkl....lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlk 91
           gh  +v + +    +++++++    g i +w+++  ++    +  ++  +++  ++ ++pd+    +v gs+ +++++w++st k ++ +k
   Q: 91   GHSAKVNQLLI---FGEHVLSVDVEGNIFIWQFKGIDKnlapIGHIKLEDEFSPSCIMHPDTYlnKIVLGSQEGALQLWNISTKKKIYEFK 178
           55555555444...59999999999999999999988888998888777778888888888767799************************ PP
   S: 92   ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtd 181
           g  +s++++ +sp  d++++G +d  i+v +++ ++++ ++   ++g+vn ++++ dg  ll+sG+  +++ +W+l+  +l    +++h++
   Q: 179  GWGSSITCCVSSPALDVIAVGCADGKIHVHNIRYDEEVASFSHSTRGAVNALSFSTDGqPLLASGGSSGVISIWNLEKRRLQSVIKEAHDS 269
           ***************************************9999************************************************ PP
   S: 182  svyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn.... 264
           s+ sl+f  n + l+s s d++ k+w +     + + +r   gh++++++++f  n+ +++s+++D+  r++ + +++  + l++++    
   Q: 270  SIVSLQFFANEPVLMSSSADNSMKMWIFDtsdgEPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRLFSVVQDQQSRELSQQHvskr 360
           **************************8886666666799999******************************9999998888888875444 PP
   S: 265  .s 265
            +
   Q: 361  aK 362
           40 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGIFEPFRAI GYITTNVPFS VQRLGTETFV TVSVGKAFQV YNCAKLSLVL VGPQLPKKIR 60
ALASYREYTF AAYGSDIAVV KRAHQVATWS GHSAKVNQLL IFGEHVLSVD VEGNIFIWQF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAAATAAA AATAAAAAAC ACACACATAC ACATAGTTGA GCGTGTGCAT CCAATTAGGG 60
TTTAAGCTTC ACTTGTAAAA CCCTTTTGTG TGCAGAATAA CCTATAAGCT TTACCAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR002469--Peptidase_S9B_N
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

sly:101254131

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	69.63	0.00e+00	1239.00
IUUC-Aml-002289	Ailuropoda melanoleuca	35.37	1.00e-151	530.00
IUUC-Atr-002859	Amborella trichopoda	70.33	0.00e+00	1199.00
IUUC-Apl-003505	Anas platyrhynchos	36.19	7.00e-145	507.00
IUUC-Aca-004339	Anolis carolinensis	35.51	2.00e-151	529.00
IUUC-Aly-005913	Arabidopsis lyrata	73.55	0.00e+00	1345.00
IUUC-Ath-006767	Arabidopsis thaliana	72.84	0.00e+00	1348.00
IUUC-Ago-007763	Ashbya gossypii	31.03	2.00e-118	419.00
IUUC-Acl-008275	Aspergillus clavatus	29.64	1.00e-78	287.00
IUUC-Afl-008457	Aspergillus flavus	31.03	2.00e-75	276.00
IUUC-Afu-008914	Aspergillus fumigatus	29.46	2.00e-81	296.00
IUUC-Ani-009225	Aspergillus nidulans	30.25	2.00e-87	317.00
IUUC-Aor-010046	Aspergillus oryzae	29.68	9.00e-102	364.00
IUUC-Ate-010337	Aspergillus terreus	28.22	6.00e-94	338.00
IUUC-Ame-010963	Astyanax mexicanus	36.41	4.00e-153	535.00
IUUC-Bgr-011973	Blumeria graminis	31.15	5.00e-66	245.00
IUUC-Bta-012462	Bos taurus	35.87	3.00e-152	532.00
IUUC-Bci-013940	Botrytis cinerea	31.82	4.00e-70	259.00
IUUC-Bdi-014725	Brachypodium distachyon	68.93	0.00e+00	1291.00
IUUC-Bol-016534	Brassica oleracea	73.22	0.00e+00	1340.00
IUUC-Bra-016781	Brassica rapa	71.13	0.00e+00	1298.00
IUUC-Cel-018581	Caenorhabditis elegans	25.85	6.00e-83	301.00
IUUC-Cja-019675	Callithrix jacchus	34.55	1.00e-157	549.00
IUUC-Cfa-020118	Canis familiaris	35.24	5.00e-152	531.00
IUUC-Cpo-021798	Cavia porcellus	35.14	1.00e-149	523.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	32.98	4.00e-49	188.00
IUUC-Csa-023547	Chlorocebus sabaeus	34.90	4.00e-147	514.00
IUUC-Cho-024518	Choloepus hoffmanni	32.95	2.00e-52	200.00
IUUC-Cin-025339	Ciona intestinalis	33.47	4.00e-146	511.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	28.93	9.00e-101	360.00
IUUC-Cne-026859	Cryptococcus neoformans	34.01	5.00e-134	471.00
IUUC-Cme-027173	Cyanidioschyzon merolae	27.88	3.00e-85	309.00
IUUC-Dre-027733	Danio rerio	36.08	4.00e-152	531.00
IUUC-Dno-029439	Dasypus novemcinctus	35.80	1.00e-147	516.00
IUUC-Dor-030329	Dipodomys ordii	34.17	3.00e-67	249.00
IUUC-Dse-031511	Dothistroma septosporum	28.04	1.00e-90	327.00
IUUC-Dme-031694	Drosophila melanogaster	33.44	1.00e-131	462.00
IUUC-Ete-032930	Echinops telfairi	35.09	1.00e-126	446.00
IUUC-Eca-033302	Equus caballus	34.97	8.00e-147	513.00
IUUC-Eeu-034516	Erinaceus europaeus	34.46	7.00e-157	547.00
IUUC-Fca-036064	Felis catus	35.46	1.00e-149	523.00
IUUC-Fal-037024	Ficedula albicollis	36.42	2.00e-159	555.00
IUUC-Fox-037787	Fusarium oxysporum	29.89	2.00e-95	343.00
IUUC-Fso-038378	Fusarium solani	30.20	1.00e-99	357.00
IUUC-Gmo-039637	Gadus morhua	35.07	1.00e-81	296.00
IUUC-Ggr-040108	Gaeumannomyces graminis	29.04	6.00e-96	345.00
IUUC-Gga-040982	Gallus gallus	35.19	5.00e-166	577.00
IUUC-Gac-041565	Gasterosteus aculeatus	35.01	2.00e-139	489.00
IUUC-Gma-043185	Glycine max	75.41	0.00e+00	1386.00
IUUC-Ggo-045463	Gorilla gorilla	34.71	1.00e-148	520.00
IUUC-Hsa-045675	Homo sapiens	34.85	9.00e-151	526.00
IUUC-Hvu-047352	Hordeum vulgare	68.52	0.00e+00	1142.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	34.39	3.00e-158	551.00
IUUC-Kpa-049164	Komagataella pastoris	30.81	7.00e-112	397.00
IUUC-Lch-050476	Latimeria chalumnae	35.76	3.00e-163	568.00
IUUC-Lpe-051556	Leersia perrieri	63.48	0.00e+00	900.00
IUUC-Loc-052820	Lepisosteus oculatus	34.93	6.00e-155	540.00
IUUC-Lma-052961	Leptosphaeria maculans	30.83	5.00e-46	179.00
IUUC-Laf-054006	Loxodonta africana	33.87	2.00e-139	489.00
IUUC-Mcc-055037	Macaca mulatta	34.57	2.00e-149	522.00
IUUC-Mor-057280	Magnaporthe oryzae	29.37	1.00e-98	353.00
IUUC-Mpo-057408	Magnaporthe poae	29.29	6.00e-94	338.00
IUUC-Mtr-058473	Medicago truncatula	74.81	0.00e+00	1377.00
IUUC-Mla-058892	Melampsora laricipopulina	33.25	4.00e-109	388.00
IUUC-Mga-059598	Meleagris gallopavo	31.38	8.00e-116	410.00
IUUC-Mvi-060334	Microbotryum violaceum	31.36	9.00e-112	397.00
IUUC-Mmr-061239	Microcebus murinus	34.49	1.00e-147	516.00
IUUC-Mdo-062471	Monodelphis domestica	35.77	3.00e-144	505.00
IUUC-Mmu-063872	Mus musculus	35.37	4.00e-156	544.00
IUUC-Mac-064631	Musa acuminata	71.12	0.00e+00	1163.00
IUUC-Mpu-066039	Mustela putorius furo	35.03	3.00e-162	565.00
IUUC-Mlu-067485	Myotis lucifugus	35.12	1.00e-149	523.00
IUUC-Nfi-068319	Neosartorya fischeri	28.24	2.00e-96	346.00
IUUC-Ncr-068725	Neurospora crassa	30.06	2.00e-105	376.00
IUUC-Nle-069050	Nomascus leucogenys	34.39	5.00e-150	524.00
IUUC-Opr-070437	Ochotona princeps	32.97	6.00e-45	175.00
IUUC-Ont-071574	Oreochromis niloticus	34.27	4.00e-144	504.00
IUUC-Oan-072826	Ornithorhynchus anatinus	36.48	7.00e-159	553.00
IUUC-Ocu-073995	Oryctolagus cuniculus	34.83	2.00e-142	499.00
IUUC-Oba-075407	Oryza barthii	63.00	0.00e+00	1098.00
IUUC-Obr-076451	Oryza brachyantha	70.47	0.00e+00	1313.00
IUUC-Ogl-077535	Oryza glaberrima	69.66	0.00e+00	1290.00
IUUC-Ogu-077995	Oryza glumaepatula	62.19	0.00e+00	1096.00
IUUC-Oin-079431	Oryza indica	70.04	0.00e+00	1298.00
IUUC-Olo-080495	Oryza longistaminata	61.66	0.00e+00	1074.00
IUUC-Oni-082336	Oryza nivara	67.51	0.00e+00	1218.00
IUUC-Opu-084028	Oryza punctata	64.38	0.00e+00	1094.00
IUUC-Oru-084500	Oryza rufipogon	62.23	0.00e+00	1093.00
IUUC-Osa-086242	Oryza sativa	70.15	0.00e+00	1299.00
IUUC-Ola-086612	Oryzias latipes	34.88	1.00e-114	406.00
IUUC-Olu-087703	Ostreococcus lucimarinus	35.63	1.00e-155	542.00
IUUC-Oga-088572	Otolemur garnettii	35.36	4.00e-150	525.00
IUUC-Oar-090363	Ovis aries	36.02	8.00e-154	537.00
IUUC-Ptr-090477	Pan troglodytes	34.71	1.00e-148	520.00
IUUC-Pan-092914	Papio anubis	34.55	2.00e-150	525.00
IUUC-Psi-093019	Pelodiscus sinensis	34.89	2.00e-150	525.00
IUUC-Pma-094303	Petromyzon marinus	33.68	1.00e-129	456.00
IUUC-Pno-094938	Phaeosphaeria nodorum	31.81	3.00e-46	179.00
IUUC-Ppa-095720	Physcomitrella patens	54.61	0.00e+00	1009.00
IUUC-Pfo-097034	Poecilia formosa	34.27	2.00e-134	473.00
IUUC-Pab-097669	Pongo abelii	34.67	2.00e-150	525.00
IUUC-Pop-098835	Populus trichocarpa	75.99	0.00e+00	1401.00
IUUC-Pca-101097	Procavia capensis	37.99	1.00e-60	227.00
IUUC-Ppe-101430	Prunus persica	77.75	0.00e+00	1473.00
IUUC-Pva-103152	Pteropus vampyrus	35.11	5.00e-153	534.00
IUUC-Pgr-103517	Puccinia graminis	30.98	1.00e-128	453.00
IUUC-Ptt-103697	Puccinia triticina	32.12	1.00e-96	346.00
IUUC-Pte-104121	Pyrenophora teres	29.80	7.00e-50	192.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	29.82	3.00e-49	189.00
IUUC-Rno-105435	Rattus norvegicus	34.86	1.00e-150	526.00
IUUC-Sce-106202	Saccharomyces cerevisiae	31.31	2.00e-103	369.00
IUUC-Sha-107272	Sarcophilus harrisii	36.20	7.00e-142	497.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.43	7.00e-152	530.00
IUUC-Spo-108256	Schizosaccharomyces pombe	36.60	1.00e-149	523.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	31.66	3.00e-65	243.00
IUUC-Smo-108762	Selaginella moellendorffii	55.39	0.00e+00	1018.00
IUUC-Sit-110051	Setaria italica	69.82	0.00e+00	1283.00
IUUC-Stu-112018	Solanum tuberosum	97.46	0.00e+00	1710.00
IUUC-Sar-113348	Sorex araneus	33.63	7.00e-100	357.00
IUUC-Sbi-114282	Sorghum bicolor	69.38	0.00e+00	1301.00
IUUC-Sre-114946	Sporisorium reilianum	30.08	9.00e-86	311.00
IUUC-Ssc-115287	Sus scrofa	35.70	3.00e-153	535.00
IUUC-Tgu-117138	Taeniopygia guttata	34.80	9.00e-130	457.00
IUUC-Tru-118232	Takifugu rubripes	33.59	1.00e-135	476.00
IUUC-Tsy-119502	Tarsius syrichta	28.84	1.00e-102	367.00
IUUC-Tni-120378	Tetraodon nigroviridis	36.29	4.00e-137	481.00
IUUC-Tca-121506	Theobroma cacao	76.87	0.00e+00	1408.00
IUUC-Tre-122166	Trichoderma reesei	29.82	3.00e-109	389.00
IUUC-Tvi-122385	Trichoderma virens	29.41	2.00e-106	380.00
IUUC-Tae-122836	Triticum aestivum	69.75	0.00e+00	1318.00
IUUC-Tur-126490	Triticum urartu	59.77	0.00e+00	999.00
IUUC-Tme-127157	Tuber melanosporum	32.54	5.00e-113	401.00
IUUC-Tbe-127981	Tupaia belangeri	37.59	6.00e-129	454.00
IUUC-Ttr-128886	Tursiops truncatus	35.00	6.00e-147	514.00
IUUC-Uma-129439	Ustilago maydis	29.90	4.00e-92	332.00
IUUC-Vda-129760	Verticillium dahliae	30.23	1.00e-111	397.00
IUUC-Vpa-130456	Vicugna pacos	35.15	4.00e-152	531.00
IUUC-Vvi-131086	Vitis vinifera	78.83	0.00e+00	1465.00
IUUC-Xtr-131829	Xenopus tropicalis	36.55	6.00e-167	580.00
IUUC-Xma-133588	Xiphophorus maculatus	33.51	1.00e-132	466.00
IUUC-Yli-134328	Yarrowia lipolytica	31.45	8.00e-102	364.00
IUUC-Zma-135808	Zea mays	68.30	0.00e+00	1286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence