iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000020496.9	ENSMUST00000094151.5	ENSMUSP00000091703.6
ENSMUSG00000020496.9	ENSMUST00000217262.1	ENSMUSP00000150777.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	miRTarBase	microRNA	TRANSFAC
RAID2
Post-translational Modifications (PTMs)
PHOSIDA	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	94.92	4.00e-96	348.00	IUUC-Hsa-046778

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Mus musculus

Protein Sequence
(Fasta)

LALPAGPADA ICALCQRAPR EPVRADCGHR FCRACVVRFW AEEDGPFPCP ECADDCWQRA 60
VEPSRPPLSR RLLALEEAAA APARDGPASE AALQLLCRAD GDPLCSACRM AAGPEPPEWE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGTGCCC GGCGTTGGCG CAGTCTGGGT CTGAGTCGTA GGCTGAGGCT CGTCGGCCTT 60
GATCTCCGGC CGGTCCTCGG CCCTTCTGCG CCCTCTCCGC CCGCGCCCTC GTCGGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051865--P:protein autoubiquitination
GO:0070936--P:protein K48-linked ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002191	Ailuropoda melanoleuca	85.05	4.00e-48	182.00
IUUC-Bta-012513	Bos taurus	90.68	3.00e-91	327.00
IUUC-Cja-019008	Callithrix jacchus	86.18	5.00e-55	205.00
IUUC-Cpo-022460	Cavia porcellus	86.30	7.00e-73	266.00
IUUC-Csa-024164	Chlorocebus sabaeus	95.28	4.00e-57	213.00
IUUC-Dno-029128	Dasypus novemcinctus	82.24	9.00e-33	131.00
IUUC-Ete-033026	Echinops telfairi	80.00	6.00e-16	75.10
IUUC-Eca-034206	Equus caballus	87.74	2.00e-36	143.00
IUUC-Fca-035393	Felis catus	72.79	2.00e-38	151.00
IUUC-Ggo-045548	Gorilla gorilla	95.28	4.00e-57	213.00
IUUC-Hsa-046778	Homo sapiens	95.48	7.00e-90	323.00
IUUC-Itr-047955	Ictidomys tridecemlineatus	90.57	2.00e-50	191.00
IUUC-Laf-054276	Loxodonta africana	89.29	3.00e-40	156.00
IUUC-Mcc-054972	Macaca mulatta	95.48	7.00e-90	323.00
IUUC-Mpu-066574	Mustela putorius furo	83.67	2.00e-29	121.00
IUUC-Mlu-067760	Myotis lucifugus	91.86	6.00e-92	330.00
IUUC-Nle-069556	Nomascus leucogenys	92.11	1.00e-55	207.00
IUUC-Ocu-074636	Oryctolagus cuniculus	80.00	2.00e-51	193.00
IUUC-Oga-088384	Otolemur garnettii	92.76	1.00e-86	311.00
IUUC-Oar-090060	Ovis aries	88.82	4.00e-58	217.00
IUUC-Ptr-090496	Pan troglodytes	94.34	6.00e-53	198.00
IUUC-Pan-091825	Papio anubis	95.48	7.00e-90	323.00
IUUC-Pca-100168	Procavia capensis	83.04	2.00e-36	144.00
IUUC-Rno-105436	Rattus norvegicus	99.15	6.00e-104	369.00
IUUC-Tbe-127513	Tupaia belangeri	63.28	2.00e-27	113.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence