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Tag Content
iUUCD ID IUUC-Ptr-091135
Ensembl Protein ID ENSPTRP00000016495.5
UniProt Accession H2QDY9; H2QDY9_PANTR
Genbank Protein ID ENSPTRP00000016495
Protein Name Uncharacterized protein
Genbank Nucleotide ID AACZ03109976
Gene Name TNRC6C
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPTRG00000009699.5 ENSPTRT00000017804.5 ENSPTRP00000016495.5
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
UBD/Alpha-Helix/UBA 36.67 3.00e-31 135.00 IUUC-Dme-032014
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Pan troglodytes
Protein Sequence
(Fasta)
MATGSAQGNF TGHTKKTNGN NGTNGALVQS PSNQSALGAG GANSNGSAAR VWGVATGSSS 60
GLAHCSVSGG DGKMDTMIGD GRSQNCWGAS NSNAGINLNL NPNANPAAWP VLGHEGTVAT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ptr-091135|UBD,UBA|Pan troglodytes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTACAG GGAGTGCCCA GGGCAACTTC ACTGGACATA CCAAGAAGAC AAATGGCAAT 60
AATGGCACCA ATGGCGCACT CGTCCAAAGC CCTTCTAATC AGAGTGCCCT TGGAGCAGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ptr-091135|UBD,UBA|Pan troglodytes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001985 Ailuropoda melanoleuca 42.47 0.00e+00 754.00
IUUC-Apl-003191 Anas platyrhynchos 85.73 0.00e+00 2180.00
IUUC-Aca-004717 Anolis carolinensis 86.46 0.00e+00 2194.00
IUUC-Ame-010681 Astyanax mexicanus 49.82 0.00e+00 799.00
IUUC-Bta-012915 Bos taurus 36.80 8.00e-100 359.00
IUUC-Cja-019614 Callithrix jacchus 94.38 0.00e+00 2338.00
IUUC-Cfa-020452 Canis familiaris 37.20 1.00e-106 382.00
IUUC-Cpo-021452 Cavia porcellus 88.66 0.00e+00 2300.00
IUUC-Csa-023169 Chlorocebus sabaeus 42.40 0.00e+00 738.00
IUUC-Cho-024655 Choloepus hoffmanni 39.90 2.00e-119 424.00
IUUC-Dre-028059 Danio rerio 56.51 0.00e+00 1039.00
IUUC-Dno-029734 Dasypus novemcinctus 41.06 0.00e+00 723.00
IUUC-Dor-030671 Dipodomys ordii 43.94 0.00e+00 663.00
IUUC-Dme-032014 Drosophila melanogaster 43.64 4.00e-24 107.00
IUUC-Ete-032774 Echinops telfairi 79.32 0.00e+00 1446.00
IUUC-Eca-033866 Equus caballus 89.07 0.00e+00 2187.00
IUUC-Eeu-034572 Erinaceus europaeus 55.09 5.00e-40 160.00
IUUC-Fal-036856 Ficedula albicollis 84.57 0.00e+00 2021.00
IUUC-Gga-040531 Gallus gallus 86.22 0.00e+00 2129.00
IUUC-Gac-041681 Gasterosteus aculeatus 51.79 0.00e+00 864.00
IUUC-Ggo-045143 Gorilla gorilla 95.32 0.00e+00 2399.00
IUUC-Hsa-045913 Homo sapiens 96.96 0.00e+00 2399.00
IUUC-Lch-049619 Latimeria chalumnae 52.17 7.00e-98 353.00
IUUC-Loc-052289 Lepisosteus oculatus 68.71 0.00e+00 1046.00
IUUC-Laf-053607 Loxodonta africana 88.75 0.00e+00 2273.00
IUUC-Mcc-055342 Macaca mulatta 96.43 0.00e+00 2329.00
IUUC-Meu-056275 Macropus eugenii 50.69 4.00e-97 350.00
IUUC-Mtr-058185 Medicago truncatula 44.44 1.00e-03 38.10
IUUC-Mga-059241 Meleagris gallopavo 39.08 5.00e-115 409.00
IUUC-Mmr-061348 Microcebus murinus 37.05 8.00e-102 365.00
IUUC-Mdo-062155 Monodelphis domestica 83.81 0.00e+00 2203.00
IUUC-Mmu-064259 Mus musculus 44.50 0.00e+00 720.00
IUUC-Mpu-066534 Mustela putorius furo 53.92 1.00e-81 298.00
IUUC-Mlu-067834 Myotis lucifugus 41.47 0.00e+00 754.00
IUUC-Nle-069168 Nomascus leucogenys 41.97 0.00e+00 717.00
IUUC-Opr-070976 Ochotona princeps 36.07 1.00e-80 295.00
IUUC-Ocu-074534 Oryctolagus cuniculus 73.97 0.00e+00 766.00
IUUC-Oga-088116 Otolemur garnettii 41.75 0.00e+00 741.00
IUUC-Oar-090041 Ovis aries 36.50 4.00e-99 357.00
IUUC-Pan-092665 Papio anubis 98.94 0.00e+00 2348.00
IUUC-Psi-093057 Pelodiscus sinensis 83.87 0.00e+00 2117.00
IUUC-Pma-094508 Petromyzon marinus 44.26 4.00e-50 192.00
IUUC-Pfo-097115 Poecilia formosa 55.82 0.00e+00 658.00
IUUC-Pab-097935 Pongo abelii 42.25 0.00e+00 746.00
IUUC-Pca-100481 Procavia capensis 78.01 0.00e+00 1237.00
IUUC-Pva-102376 Pteropus vampyrus 36.99 2.00e-73 271.00
IUUC-Rno-105508 Rattus norvegicus 37.13 1.00e-100 362.00
IUUC-Sar-113036 Sorex araneus 59.41 5.00e-41 164.00
IUUC-Sbi-114163 Sorghum bicolor 30.88 1.30e-01 31.60
IUUC-Ssc-115574 Sus scrofa 69.86 0.00e+00 1467.00
IUUC-Tgu-117233 Taeniopygia guttata 85.32 0.00e+00 2052.00
IUUC-Tru-117725 Takifugu rubripes 53.39 0.00e+00 943.00
IUUC-Tsy-118786 Tarsius syrichta 37.55 1.00e-71 265.00
IUUC-Tae-123684 Triticum aestivum 37.93 6.30e-02 32.30
IUUC-Tbe-127989 Tupaia belangeri 83.51 0.00e+00 885.00
IUUC-Ttr-128518 Tursiops truncatus 88.84 0.00e+00 2279.00
IUUC-Vpa-130230 Vicugna pacos 43.26 2.00e-73 271.00
IUUC-Xtr-132265 Xenopus tropicalis 71.72 0.00e+00 1752.00
Created Date 25-Jun-2017

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