iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Smo-108974

Ensembl Protein ID

EFJ15498

UniProt Accession

D8SJR8; D8SJR8_SELML

Genbank Protein ID

EFJ15498.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL377623

Gene Name

SELMODRAFT_155930

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_155930	EFJ15498	EFJ15498

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-42	140.3	148	187
UBD/Beta-Prp	4.70e-113	378.0	23	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gH d vt++ f  +++ l+++s D  ++vWD+ t+ ++++
   Q: 148  GHRDQVTDVVFieNGNKLLTSSKDTFVRVWDIQTQACVQT 187
           8***********877********************99986 PP

UBD/Beta-Prp

   S: 57   avkfspdgkilvtgseDrtikvwdlstgkcvhtlk......ghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgn 150
            ++++++gk+l+ g+ D+++ vw++++g cvh+l       g    v++++  p s++ ++sG +d  +r+wd+ +g c + t + h+g+v+ ++++++g+
   Q: 23   NLCYDSTGKLLIAGALDKLL-VWNVKQGLCVHSLApslpesGSRPAVTAIACTPaSSSLVASGYSDGSLRIWDIVKGACES-TMNSHRGAVTALRYNKNGS 121
           589999999********988.9***********9999999999999999**9996669999999****************9.999*************99* PP
   S: 151  llvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
           ll++Gs+D+ v +Wd   ++ l +l+g h d+v+ + f +ng+ l++ s+d+ v++wd+qt+ cv+t   h++ v+s++++p + ++v+g++D  +r++ +
   Q: 122  LLATGSKDTDVIVWDTVGETGLFRLQG-HRDQVTDVVFIENGNKLLTSSKDTFVRVWDIQTQACVQTIVSHRSEVWSLDVDPLERYVVTGGADMELRLFQV 221
           ****************99999****99.***************************************************************9999998743 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MVKSYLRYEE CNSFGVVVSA ESNLCYDSTG KLLIAGALDK LLVWNVKQGL CVHSLAPSLP 60
ESGSRPAVTA IACTPASSSL VASGYSDGSL RIWDIVKGAC ESTMNSHRGA VTALRYNKNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGAAGT CCTACCTCCG CTACGAGGAA TGCAATTCTT TCGGTGTGGT TGTGTCGGCG 60
GAATCGAATC TGTGCTACGA TAGCACAGGG AAGCTCCTCA TCGCCGGCGC TCTCGACAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

smo:SELMODRAFT_155930

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001245	Ailuropoda melanoleuca	39.04	2.00e-179	621.00
IUUC-Atr-002700	Amborella trichopoda	55.25	0.00e+00	999.00
IUUC-Apl-004164	Anas platyrhynchos	41.45	4.00e-153	534.00
IUUC-Aca-004765	Anolis carolinensis	40.13	0.00e+00	640.00
IUUC-Afl-008544	Aspergillus flavus	35.59	2.00e-156	545.00
IUUC-Aor-010140	Aspergillus oryzae	36.05	3.00e-159	555.00
IUUC-Ame-010956	Astyanax mexicanus	45.00	4.00e-130	458.00
IUUC-Cja-019425	Callithrix jacchus	39.04	1.00e-178	619.00
IUUC-Cpo-021729	Cavia porcellus	41.42	3.00e-139	488.00
IUUC-Csa-024098	Chlorocebus sabaeus	39.13	0.00e+00	627.00
IUUC-Cho-024495	Choloepus hoffmanni	40.77	3.00e-105	375.00
IUUC-Cin-025245	Ciona intestinalis	37.18	2.00e-106	379.00
IUUC-Cme-027162	Cyanidioschyzon merolae	24.22	8.00e-50	191.00
IUUC-Dre-027874	Danio rerio	39.98	0.00e+00	634.00
IUUC-Ete-032608	Echinops telfairi	36.82	2.00e-100	358.00
IUUC-Eca-034181	Equus caballus	39.13	3.00e-179	621.00
IUUC-Eeu-034495	Erinaceus europaeus	39.66	2.00e-178	619.00
IUUC-Fca-035994	Felis catus	40.58	2.00e-175	608.00
IUUC-Fal-036611	Ficedula albicollis	39.01	2.00e-180	625.00
IUUC-Gmo-039018	Gadus morhua	34.41	9.00e-86	310.00
IUUC-Gga-040707	Gallus gallus	39.18	3.00e-179	621.00
IUUC-Gac-042334	Gasterosteus aculeatus	33.57	4.00e-75	275.00
IUUC-Hsa-046996	Homo sapiens	38.95	5.00e-179	620.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	39.47	7.00e-179	620.00
IUUC-Kpa-049185	Komagataella pastoris	34.04	1.00e-155	543.00
IUUC-Lch-050098	Latimeria chalumnae	39.05	3.00e-156	545.00
IUUC-Mcc-055077	Macaca mulatta	39.23	0.00e+00	626.00
IUUC-Mtr-057838	Medicago truncatula	55.23	0.00e+00	987.00
IUUC-Mga-060120	Meleagris gallopavo	41.68	4.00e-135	474.00
IUUC-Mmr-060635	Microcebus murinus	39.44	0.00e+00	627.00
IUUC-Mdo-063023	Monodelphis domestica	39.64	0.00e+00	634.00
IUUC-Mpu-066462	Mustela putorius furo	39.08	2.00e-179	622.00
IUUC-Mlu-067894	Myotis lucifugus	38.83	8.00e-180	623.00
IUUC-Ont-072339	Oreochromis niloticus	38.09	1.00e-172	599.00
IUUC-Ocu-074227	Oryctolagus cuniculus	39.26	0.00e+00	628.00
IUUC-Ola-087395	Oryzias latipes	45.64	3.00e-117	415.00
IUUC-Oga-088574	Otolemur garnettii	39.47	2.00e-180	625.00
IUUC-Ptr-090694	Pan troglodytes	39.06	5.00e-179	620.00
IUUC-Pan-092420	Papio anubis	38.94	3.00e-178	618.00
IUUC-Psi-093683	Pelodiscus sinensis	39.66	0.00e+00	643.00
IUUC-Pma-094197	Petromyzon marinus	39.22	1.00e-39	155.00
IUUC-Pfo-096299	Poecilia formosa	38.79	2.00e-176	612.00
IUUC-Pab-098706	Pongo abelii	38.53	5.00e-178	617.00
IUUC-Pca-100796	Procavia capensis	33.26	9.00e-121	427.00
IUUC-Pva-103241	Pteropus vampyrus	42.22	1.00e-167	582.00
IUUC-Pgr-103432	Puccinia graminis	36.07	1.00e-146	513.00
IUUC-Ptt-103742	Puccinia triticina	37.10	3.00e-129	455.00
IUUC-Sce-106271	Saccharomyces cerevisiae	34.61	1.00e-152	533.00
IUUC-Sha-107550	Sarcophilus harrisii	38.55	4.00e-177	614.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	34.85	2.00e-155	542.00
IUUC-Sre-115006	Sporisorium reilianum	37.88	4.00e-107	382.00
IUUC-Tgu-117282	Taeniopygia guttata	38.59	5.00e-179	620.00
IUUC-Tru-118406	Takifugu rubripes	39.57	6.00e-175	607.00
IUUC-Tsy-119170	Tarsius syrichta	38.64	1.00e-175	609.00
IUUC-Tni-119721	Tetraodon nigroviridis	38.61	3.00e-165	575.00
IUUC-Vpa-130163	Vicugna pacos	31.58	7.00e-60	224.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence