iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129756

Ensembl Protein ID

EGY13608

UniProt Accession

G2WRV7; G2WRV7_VERDV

Genbank Protein ID

EGY13608.1

Protein Name

WD repeat-containing protein pop3

Genbank Nucleotide ID

DS572695

Gene Name

VDAG_00290

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_00290	EGY13608	EGY13608

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-34	116.1	73	109
UBD/Beta-Prp	9.20e-49	165.3	4	188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt+ +t++af  + + +v++s Dgt+k+W++r+g +
   Q: 73   GHTGNITGVAFhCEgKWMVTSSEDGTVKIWETRSGQV 109
           8**********9667999**************99975 PP

UBD/Beta-Prp

   S: 24   llatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwd 122
           +l t+++d+ti+ w++ +g + r+++  +++v+ +++spd+  ++ ++  +t+k++d++  ++ ++ t++gh+ +++ ++f+ +g+++v+ s+d t+++w+
   Q: 4    ILCTAGYDHTIRFWEALSGICSRTIQHPDSQVNRLCISPDK-RFLAAAGHHTVKLFDIKstNPNPLLTFEGHTGNITGVAFHCEGKWMVTSSEDGTVKIWE 103
           5789999*********************************8.677777779*****9998899************************************** PP
   S: 123  letgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           +++gq+ +     h    n vv+hp++  ++s+  ++ vr+Wdl+ +++ ++l  + + sv s+++ s+g  l ++ + g v +w+l
   Q: 104  TRSGQVQR--SYSHGCPANDVVIHPNQGEIISCDRNGSVRVWDLAENNCSHQLIPEEDVSVSSVTVASDGSLLCAANNAGNVFVWQL 188
           *******8..7888889************************************77799***************************87 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MSVILCTAGY DHTIRFWEAL SGICSRTIQH PDSQVNRLCI SPDKRFLAAA GHHTVKLFDI 60
KSTNPNPLLT FEGHTGNITG VAFHCEGKWM VTSSEDGTVK IWETRSGQVQ RSYSHGCPAN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGATTCT GCGTTCTCTT CCCTGCACCT TGCTGCAGTC TACTGATACA AAGCTTCCTG 60
TCGTATAACA TGCGAACGCC AGAGCGGCCG TCTCAGTAAA TATGTCTGTG ATTCTTTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0010008--C:endosome membrane
GO:0031234--C:extrinsic component of cytoplasmic side of plasma membrane
GO:0000139--C:Golgi membrane
GO:0034399--C:nuclear periphery
GO:0031931--C:TORC1 complex
GO:0031932--C:TORC2 complex
GO:0030295--F:protein kinase activator activity
GO:0030950--P:establishment or maintenance of actin cytoskeleton polarity
GO:0031505--P:fungal-type cell wall organization
GO:0031930--P:mitochondria-nucleus signaling pathway
GO:0001558--P:regulation of cell growth
GO:0031929--P:TOR signaling

KEGG

vda:VDAG_00290

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000595	Aegilops tauschii	52.96	3.00e-96	343.00
IUUC-Aml-001813	Ailuropoda melanoleuca	45.08	1.00e-77	281.00
IUUC-Atr-002512	Amborella trichopoda	50.78	9.00e-92	328.00
IUUC-Apl-003495	Anas platyrhynchos	41.05	1.00e-58	217.00
IUUC-Aca-004613	Anolis carolinensis	46.35	1.00e-78	285.00
IUUC-Aly-006340	Arabidopsis lyrata	51.12	4.00e-90	322.00
IUUC-Ath-007273	Arabidopsis thaliana	50.48	9.00e-89	318.00
IUUC-Ago-007737	Ashbya gossypii	61.98	8.00e-121	424.00
IUUC-Acl-008090	Aspergillus clavatus	75.52	3.00e-105	373.00
IUUC-Afl-008490	Aspergillus flavus	71.65	1.00e-77	281.00
IUUC-Afu-009060	Aspergillus fumigatus	70.95	4.00e-96	343.00
IUUC-Ani-009251	Aspergillus nidulans	76.69	5.00e-105	372.00
IUUC-Ang-009528	Aspergillus niger	74.61	2.00e-135	473.00
IUUC-Aor-010005	Aspergillus oryzae	71.47	1.00e-127	447.00
IUUC-Ate-010423	Aspergillus terreus	76.69	1.00e-104	371.00
IUUC-Ame-011752	Astyanax mexicanus	46.35	3.00e-79	286.00
IUUC-Bgr-012299	Blumeria graminis	77.88	1.00e-145	507.00
IUUC-Bta-013007	Bos taurus	44.73	1.00e-76	278.00
IUUC-Bci-013987	Botrytis cinerea	84.04	2.00e-153	533.00
IUUC-Bdi-014082	Brachypodium distachyon	53.27	3.00e-96	342.00
IUUC-Bol-015088	Brassica oleracea	51.28	3.00e-89	319.00
IUUC-Bra-016682	Brassica rapa	42.90	2.00e-73	267.00
IUUC-Cel-018473	Caenorhabditis elegans	24.85	2.00e-28	117.00
IUUC-Cja-019216	Callithrix jacchus	39.93	7.00e-56	208.00
IUUC-Cfa-021229	Canis familiaris	45.40	1.00e-78	284.00
IUUC-Cpo-022270	Cavia porcellus	45.40	1.00e-78	284.00
IUUC-Cre-022742	Chlamydomonas reinhardtii	51.44	8.00e-92	328.00
IUUC-Csa-023275	Chlorocebus sabaeus	45.71	6.00e-79	285.00
IUUC-Cin-025588	Ciona intestinalis	40.38	9.00e-71	258.00
IUUC-Csv-026252	Ciona savignyi	41.96	5.00e-72	262.00
IUUC-Cgl-026418	Colletotrichum gloeosporioides	94.32	2.00e-175	605.00
IUUC-Cne-027013	Cryptococcus neoformans	60.94	1.00e-111	394.00
IUUC-Cme-027131	Cyanidioschyzon merolae	33.97	7.00e-57	212.00
IUUC-Dre-028424	Danio rerio	46.98	3.00e-80	290.00
IUUC-Dno-029327	Dasypus novemcinctus	45.40	1.00e-78	284.00
IUUC-Dor-030186	Dipodomys ordii	51.72	2.00e-43	167.00
IUUC-Dse-031475	Dothistroma septosporum	76.63	4.00e-147	511.00
IUUC-Dme-031826	Drosophila melanogaster	38.10	7.00e-56	208.00
IUUC-Ete-032252	Echinops telfairi	38.57	3.00e-48	183.00
IUUC-Eca-033889	Equus caballus	41.77	5.00e-47	179.00
IUUC-Fca-035989	Felis catus	45.40	2.00e-78	284.00
IUUC-Fal-036637	Ficedula albicollis	46.67	9.00e-80	288.00
IUUC-Fox-038066	Fusarium oxysporum	93.08	3.00e-174	602.00
IUUC-Fso-038288	Fusarium solani	90.57	3.00e-166	575.00
IUUC-Gmo-039477	Gadus morhua	46.67	8.00e-81	291.00
IUUC-Ggr-039990	Gaeumannomyces graminis	90.25	3.00e-168	582.00
IUUC-Gga-040890	Gallus gallus	46.35	3.00e-79	286.00
IUUC-Gac-041502	Gasterosteus aculeatus	46.98	2.00e-80	290.00
IUUC-Gma-043580	Glycine max	52.81	3.00e-94	336.00
IUUC-Ggo-045629	Gorilla gorilla	45.11	5.00e-77	279.00
IUUC-Hsa-045824	Homo sapiens	45.00	4.00e-67	246.00
IUUC-Hvu-047767	Hordeum vulgare	53.27	2.00e-96	343.00
IUUC-Itr-047932	Ictidomys tridecemlineatus	45.40	1.00e-78	284.00
IUUC-Kpa-049173	Komagataella pastoris	64.54	3.00e-123	432.00
IUUC-Lch-049703	Latimeria chalumnae	46.98	2.00e-80	290.00
IUUC-Lpe-050744	Leersia perrieri	46.73	5.00e-77	279.00
IUUC-Loc-052507	Lepisosteus oculatus	46.35	2.00e-79	286.00
IUUC-Lma-053084	Leptosphaeria maculans	77.09	1.00e-143	500.00
IUUC-Laf-053595	Loxodonta africana	45.40	3.00e-78	283.00
IUUC-Mcc-055634	Macaca mulatta	38.86	1.00e-68	251.00
IUUC-Meu-055925	Macropus eugenii	46.43	5.00e-68	249.00
IUUC-Mor-057131	Magnaporthe oryzae	82.08	1.00e-155	540.00
IUUC-Mpo-057524	Magnaporthe poae	89.62	9.00e-168	580.00
IUUC-Mtr-057980	Medicago truncatula	52.19	3.00e-93	333.00
IUUC-Mla-059082	Melampsora laricipopulina	51.91	5.00e-91	325.00
IUUC-Mga-059552	Meleagris gallopavo	41.90	1.00e-57	214.00
IUUC-Mvi-060504	Microbotryum violaceum	55.77	4.00e-99	353.00
IUUC-Mdo-062886	Monodelphis domestica	46.35	4.00e-79	286.00
IUUC-Mmu-063477	Mus musculus	45.71	8.00e-80	288.00
IUUC-Mac-065439	Musa acuminata	52.96	2.00e-95	340.00
IUUC-Mpu-066708	Mustela putorius furo	45.08	1.00e-77	280.00
IUUC-Mlu-067311	Myotis lucifugus	43.25	3.00e-75	273.00
IUUC-Nfi-068294	Neosartorya fischeri	73.31	2.00e-98	350.00
IUUC-Ncr-068811	Neurospora crassa	85.53	3.00e-164	568.00
IUUC-Nle-069632	Nomascus leucogenys	45.40	2.00e-78	283.00
IUUC-Opr-071128	Ochotona princeps	47.75	1.00e-45	173.00
IUUC-Ont-071494	Oreochromis niloticus	46.35	1.00e-79	287.00
IUUC-Oan-073298	Ornithorhynchus anatinus	40.53	1.00e-35	140.00
IUUC-Ocu-073983	Oryctolagus cuniculus	45.08	2.00e-77	280.00
IUUC-Oba-076001	Oryza barthii	46.11	6.00e-76	275.00
IUUC-Obr-076833	Oryza brachyantha	51.09	1.00e-90	324.00
IUUC-Ogl-077680	Oryza glaberrima	51.09	1.00e-90	324.00
IUUC-Ogu-078086	Oryza glumaepatula	46.11	3.00e-76	276.00
IUUC-Oin-079336	Oryza indica	51.09	1.00e-90	324.00
IUUC-Olo-080368	Oryza longistaminata	43.60	2.00e-62	229.00
IUUC-Oni-083046	Oryza nivara	46.11	5.00e-76	275.00
IUUC-Opu-084173	Oryza punctata	46.11	6.00e-76	275.00
IUUC-Oru-084599	Oryza rufipogon	46.11	6.00e-76	275.00
IUUC-Osa-086193	Oryza sativa	51.09	1.00e-90	324.00
IUUC-Ola-087216	Oryzias latipes	46.67	8.00e-80	288.00
IUUC-Olu-087852	Ostreococcus lucimarinus	49.52	5.00e-89	318.00
IUUC-Oga-088840	Otolemur garnettii	45.11	7.00e-77	278.00
IUUC-Oar-089294	Ovis aries	44.68	3.00e-66	243.00
IUUC-Ptr-090565	Pan troglodytes	45.40	2.00e-78	283.00
IUUC-Pan-092175	Papio anubis	45.71	6.00e-79	285.00
IUUC-Psi-093180	Pelodiscus sinensis	42.28	2.00e-59	220.00
IUUC-Pma-094705	Petromyzon marinus	44.13	5.00e-78	282.00
IUUC-Pno-095001	Phaeosphaeria nodorum	73.15	1.00e-132	464.00
IUUC-Ppa-095628	Physcomitrella patens	52.05	4.00e-93	332.00
IUUC-Pfo-097128	Poecilia formosa	46.98	6.00e-80	288.00
IUUC-Pab-098386	Pongo abelii	45.40	2.00e-78	283.00
IUUC-Pop-099064	Populus trichocarpa	54.06	3.00e-95	339.00
IUUC-Pca-100971	Procavia capensis	45.36	4.00e-68	249.00
IUUC-Ppe-101871	Prunus persica	53.44	6.00e-95	338.00
IUUC-Pva-102230	Pteropus vampyrus	52.46	4.00e-35	139.00
IUUC-Pgr-103511	Puccinia graminis	51.16	1.00e-90	324.00
IUUC-Ptt-103882	Puccinia triticina	48.50	1.00e-88	317.00
IUUC-Pte-104402	Pyrenophora teres	76.78	2.00e-143	499.00
IUUC-Pyt-104448	Pyrenophora triticirepentis	76.47	6.00e-143	498.00
IUUC-Rno-104880	Rattus norvegicus	45.71	1.00e-79	287.00
IUUC-Sce-106266	Saccharomyces cerevisiae	63.58	4.00e-123	432.00
IUUC-Sha-106966	Sarcophilus harrisii	46.35	4.00e-79	286.00
IUUC-Sja-107797	Schizosaccharomyces japonicus	64.54	3.00e-118	416.00
IUUC-Spo-108366	Schizosaccharomyces pombe	64.54	1.00e-120	424.00
IUUC-Smo-108749	Selaginella moellendorffii	51.26	1.00e-87	314.00
IUUC-Sit-110807	Setaria italica	53.58	3.00e-96	343.00
IUUC-Sly-111879	Solanum lycopersicum	47.93	1.00e-59	221.00
IUUC-Sbi-114551	Sorghum bicolor	53.58	3.00e-96	342.00
IUUC-Sre-114962	Sporisorium reilianum	54.25	2.00e-108	384.00
IUUC-Ssc-115363	Sus scrofa	45.43	2.00e-77	280.00
IUUC-Tgu-116695	Taeniopygia guttata	39.37	2.00e-52	197.00
IUUC-Tru-117999	Takifugu rubripes	44.79	5.00e-78	282.00
IUUC-Tni-119973	Tetraodon nigroviridis	45.40	1.00e-78	284.00
IUUC-Tca-121688	Theobroma cacao	52.96	1.00e-93	333.00
IUUC-Tre-122158	Trichoderma reesei	84.28	3.00e-158	548.00
IUUC-Tvi-122511	Trichoderma virens	88.75	5.00e-168	581.00
IUUC-Tae-124124	Triticum aestivum	52.96	3.00e-96	343.00
IUUC-Tur-126228	Triticum urartu	47.98	9.00e-82	294.00
IUUC-Tme-127100	Tuber melanosporum	77.85	1.00e-145	507.00
IUUC-Uma-129358	Ustilago maydis	55.15	8.00e-109	385.00
IUUC-Vvi-131581	Vitis vinifera	53.44	3.00e-93	333.00
IUUC-Xtr-132363	Xenopus tropicalis	46.67	1.00e-80	290.00
IUUC-Xma-133857	Xiphophorus maculatus	46.98	6.00e-80	288.00
IUUC-Yli-134368	Yarrowia lipolytica	68.05	1.00e-128	450.00
IUUC-Zma-135854	Zea mays	53.27	2.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence