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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105470
UUCD1 version UUC-RaN-00917
Ensembl Protein ID ENSRNOP00000018025.5
UniProt Accession D3ZUV2; D3ZUV2_RAT
Genbank Protein ID ENSRNOP00000018025
Protein Name Mindbomb E3 ubiquitin protein ligase 1
Genbank Nucleotide ID AABR07031156
Gene Name Mib1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000013281.6 ENSRNOT00000018025.6 ENSRNOP00000018025.5
Annotation
mRNA Expression
GEO
Protein-protein Interaction
PINA
Post-translational Modifications (PTMs)
CPLMdbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 91.38 0.00e+00 1934.00 IUUC-Dre-028261
E3 activity/RING/RING 66.30 0.00e+00 1294.00 IUUC-Dme-031616
E3 activity/RING/RING 98.71 0.00e+00 2028.00 IUUC-Hsa-046439
E3 activity/RING/RING 99.20 0.00e+00 2037.00 IUUC-Mmu-063520
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSNSRNNRVM VEGVGARVVR GPDWKWGKQD GGEGHVGTVR SFESPEEVVV VWDNGTAANY 60
RCSGAYDLRI LDSAPTGIKH DGTMCDTCRQ QPIIGIRWKC AECTNYDLCT VCYHGDKHHL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105470|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TTTCCCACCC TGTTGTCGCT GAGGAGCACC TCGCAGTCCC TCACGAGGCG CCGCTCGGGC 60
CTGGACGCGG CGGTACCCGG ATGTGGAGCC GCTCTCGCCC GGCGGGGACT CGGTGGCGGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105470|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001370--BIR_rpt
IPR010606--Mib_Herc2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR000433--Znf_ZZ
PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS51416--MIB_HERC2
PS50089--ZF_RING_2
PS01357--ZF_ZZ_1
PS50135--ZF_ZZ_2
Pfam

PF12796--Ank_2
PF06701--MIB_HERC2
PF00569--ZZ
PRINTS

PR01415--ANKYRIN
SMART

SM00248--ANK
SM00184--RING
SM00291--ZnF_ZZ
Gene Ontology

GO:0005813--C:centrosome
GO:0005737--C:cytoplasm
GO:0031410--C:cytoplasmic vesicle
GO:0014069--C:postsynaptic density
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0001568--P:blood vessel development
GO:0006897--P:endocytosis
GO:0001947--P:heart looping
GO:0001701--P:in utero embryonic development
GO:0045665--P:negative regulation of neuron differentiation
GO:0001841--P:neural tube formation
GO:0007219--P:Notch signaling pathway
GO:0045807--P:positive regulation of endocytosis
GO:0001756--P:somitogenesis
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001993 Ailuropoda melanoleuca 98.78 0.00e+00 1968.00
IUUC-Atr-002913 Amborella trichopoda 27.54 1.00e-21 99.40
IUUC-Apl-003867 Anas platyrhynchos 98.28 0.00e+00 1984.00
IUUC-Aca-004471 Anolis carolinensis 98.31 0.00e+00 2012.00
IUUC-Aly-006101 Arabidopsis lyrata 28.67 3.00e-18 86.30
IUUC-Ath-007301 Arabidopsis thaliana 29.46 6.00e-20 92.00
IUUC-Ang-009817 Aspergillus niger 36.24 5.00e-31 128.00
IUUC-Ame-011923 Astyanax mexicanus 87.12 0.00e+00 1821.00
IUUC-Bta-012972 Bos taurus 98.71 0.00e+00 2022.00
IUUC-Bra-017946 Brassica rapa 27.10 7.00e-21 97.10
IUUC-Cel-018156 Caenorhabditis elegans 23.56 5.00e-24 106.00
IUUC-Cja-019044 Callithrix jacchus 94.26 0.00e+00 1798.00
IUUC-Cfa-020049 Canis familiaris 96.63 0.00e+00 1962.00
IUUC-Cpo-022228 Cavia porcellus 98.07 0.00e+00 1853.00
IUUC-Csa-023228 Chlorocebus sabaeus 98.61 0.00e+00 2018.00
IUUC-Cho-024456 Choloepus hoffmanni 86.61 0.00e+00 823.00
IUUC-Cin-025506 Ciona intestinalis 71.52 0.00e+00 878.00
IUUC-Csv-026037 Ciona savignyi 64.67 0.00e+00 1196.00
IUUC-Dre-028261 Danio rerio 91.38 0.00e+00 1932.00
IUUC-Dno-029816 Dasypus novemcinctus 98.81 0.00e+00 2022.00
IUUC-Dor-030678 Dipodomys ordii 79.20 0.00e+00 1419.00
IUUC-Dme-031616 Drosophila melanogaster 64.82 0.00e+00 1281.00
IUUC-Ete-032436 Echinops telfairi 93.59 2.00e-131 464.00
IUUC-Eca-033837 Equus caballus 98.71 0.00e+00 1860.00
IUUC-Eeu-034896 Erinaceus europaeus 84.56 0.00e+00 683.00
IUUC-Fca-036568 Felis catus 98.81 0.00e+00 1849.00
IUUC-Fal-037586 Ficedula albicollis 98.31 0.00e+00 2013.00
IUUC-Gmo-038802 Gadus morhua 89.68 0.00e+00 1888.00
IUUC-Gga-040131 Gallus gallus 98.21 0.00e+00 2014.00
IUUC-Gac-042052 Gasterosteus aculeatus 90.50 0.00e+00 1933.00
IUUC-Ggo-044970 Gorilla gorilla 98.71 0.00e+00 2021.00
IUUC-Hsa-046439 Homo sapiens 98.71 0.00e+00 2021.00
IUUC-Itr-048363 Ictidomys tridecemlineatus 97.72 0.00e+00 797.00
IUUC-Lch-049434 Latimeria chalumnae 90.48 0.00e+00 1829.00
IUUC-Lpe-051464 Leersia perrieri 26.46 1.00e-15 79.70
IUUC-Loc-052278 Lepisosteus oculatus 90.19 0.00e+00 1878.00
IUUC-Laf-054292 Loxodonta africana 97.74 0.00e+00 1845.00
IUUC-Meu-056752 Macropus eugenii 79.43 7.00e-145 508.00
IUUC-Mpo-057569 Magnaporthe poae 36.90 5.00e-33 136.00
IUUC-Mga-059408 Meleagris gallopavo 97.76 0.00e+00 1863.00
IUUC-Mmr-061628 Microcebus murinus 98.81 0.00e+00 2023.00
IUUC-Mdo-062055 Monodelphis domestica 98.41 0.00e+00 2016.00
IUUC-Mmu-063520 Mus musculus 99.20 0.00e+00 2066.00
IUUC-Mpu-065864 Mustela putorius furo 99.01 0.00e+00 2025.00
IUUC-Mlu-067802 Myotis lucifugus 98.71 0.00e+00 1861.00
IUUC-Nle-069568 Nomascus leucogenys 97.29 0.00e+00 1958.00
IUUC-Opr-071018 Ochotona princeps 77.88 8.00e-172 597.00
IUUC-Ont-072079 Oreochromis niloticus 91.53 0.00e+00 1947.00
IUUC-Oan-073346 Ornithorhynchus anatinus 99.08 0.00e+00 1307.00
IUUC-Ocu-073932 Oryctolagus cuniculus 98.91 0.00e+00 2025.00
IUUC-Oba-075968 Oryza barthii 27.08 1.00e-15 79.70
IUUC-Obr-076548 Oryza brachyantha 26.77 4.00e-20 94.70
IUUC-Ogl-077477 Oryza glaberrima 27.08 1.00e-15 79.70
IUUC-Oin-079705 Oryza indica 27.08 1.00e-15 79.70
IUUC-Ome-081845 Oryza meridionalis 27.08 4.00e-16 81.30
IUUC-Opu-083740 Oryza punctata 26.40 2.00e-16 82.40
IUUC-Oru-085255 Oryza rufipogon 27.08 1.00e-15 79.70
IUUC-Osa-085560 Oryza sativa 29.62 2.00e-18 87.00
IUUC-Ola-087184 Oryzias latipes 90.97 0.00e+00 1919.00
IUUC-Oga-089002 Otolemur garnettii 95.93 0.00e+00 1999.00
IUUC-Oar-089440 Ovis aries 98.60 0.00e+00 1868.00
IUUC-Ptr-090690 Pan troglodytes 98.11 0.00e+00 2001.00
IUUC-Pan-092295 Papio anubis 98.61 0.00e+00 2018.00
IUUC-Psi-093118 Pelodiscus sinensis 98.11 0.00e+00 2001.00
IUUC-Pma-094438 Petromyzon marinus 89.13 0.00e+00 693.00
IUUC-Pfo-096302 Poecilia formosa 86.94 0.00e+00 1824.00
IUUC-Pab-097804 Pongo abelii 97.96 0.00e+00 1085.00
IUUC-Pca-101028 Procavia capensis 90.16 0.00e+00 819.00
IUUC-Pva-102890 Pteropus vampyrus 92.49 0.00e+00 904.00
IUUC-Sha-106650 Sarcophilus harrisii 98.26 0.00e+00 1944.00
IUUC-Sar-113247 Sorex araneus 85.71 0.00e+00 803.00
IUUC-Ssc-115706 Sus scrofa 98.91 0.00e+00 2025.00
IUUC-Tgu-116863 Taeniopygia guttata 98.21 0.00e+00 2008.00
IUUC-Tru-117733 Takifugu rubripes 90.42 0.00e+00 1920.00
IUUC-Tsy-119313 Tarsius syrichta 98.44 0.00e+00 1374.00
IUUC-Tni-120601 Tetraodon nigroviridis 91.89 0.00e+00 1903.00
IUUC-Tbe-127979 Tupaia belangeri 93.85 0.00e+00 1532.00
IUUC-Ttr-128673 Tursiops truncatus 98.71 0.00e+00 2020.00
IUUC-Vda-129784 Verticillium dahliae 35.21 7.00e-32 132.00
IUUC-Vpa-130332 Vicugna pacos 95.00 0.00e+00 1914.00
IUUC-Xtr-132423 Xenopus tropicalis 95.63 0.00e+00 1971.00
Created Date 25-Jun-2017

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