iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108208

Ensembl Protein ID

SPAC25H1.08c.1:pep

UniProt Accession

O13982; YEC8_SCHPO

Genbank Protein ID

CAB11604.1

Protein Name

Uncharacterized WD repeat-containing protein C25H1.08c

Genbank Nucleotide ID

CU329670

Gene Name

SPAC25H1.08c

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC25H1.08c	SPAC25H1.08c.1	SPAC25H1.08c.1:pep

Annotation

mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-36	118.8	102	135
UBD/Beta-Prp	1.40e-51	173.5	57	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH+ds+ ++++  d t++++G+ D ++++W  +t
   Q: 102  GHKDSIVAIDWsFDgTYIATGGMDSQVRLWKSST 135
           8***********666***************9665 PP

UBD/Beta-Prp

   S: 48   lsgheaevtavkfspdgk.ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghd 137
           + +h++ v +v+++p  + + ++g+ D++ ++wd+ tg+++  l+gh+ds++++++s +g ++++G+ d+ +r+w+ +tg ++ + ++  d
   Q: 57   FFEHKDSVFSVSINPVHSnLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVD 147
           56899*********98766*****************************************************************7777777 PP
   S: 138  gvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng..kelvsgsldgtvklwdlq..tgecvrtlngh 221
           ++v+ +++hp+g  l++G++D+ + +W+l++gk+++ + g ht +v+  +f + g  k+l+++++ gt+++w+    + ec ++  +h
   Q: 148  EIVW-LSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYG-HTAPVNAGKFIPPGvgKRLATVDDSGTLIVWNPAtgAPECRMSSDDH 233
           7766.89*******************************99.***********99999****************994444566665555 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MAEEEENQEL YIAENEVEEV IKDNDKLMDQ GVTEDEAEQE QNDTMNNMVM DMSVQGFFEH 60
KDSVFSVSIN PVHSNLCASG GGDDLGYIWD ITTGEQICQL TGHKDSIVAI DWSFDGTYIA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTTAGCTG GTACACACCC ACATTAATAA TGGCCGAAGA AGAAGAAAAT CAAGAATTAT 60
ACATAGCAGA AAATGAAGTA GAAGAAGTTA TTAAAGATAA TGACAAACTA ATGGACCAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0030687--C:preribosome, large subunit precursor
GO:0043234--C:protein complex
GO:0051082--F:unfolded protein binding
GO:0000027--P:ribosomal large subunit assembly
GO:0042273--P:ribosomal large subunit biogenesis

KEGG

spo:SPAC25H1.08c

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000794	Aegilops tauschii	29.76	2.00e-48	184.00
IUUC-Aml-001781	Ailuropoda melanoleuca	29.10	4.00e-47	180.00
IUUC-Atr-003169	Amborella trichopoda	30.92	3.00e-49	186.00
IUUC-Aca-004594	Anolis carolinensis	31.07	3.00e-49	186.00
IUUC-Aly-006277	Arabidopsis lyrata	29.68	2.00e-46	177.00
IUUC-Ath-007701	Arabidopsis thaliana	29.97	5.00e-48	182.00
IUUC-Ago-007790	Ashbya gossypii	26.92	7.00e-28	116.00
IUUC-Acl-008079	Aspergillus clavatus	28.08	4.00e-27	114.00
IUUC-Afl-008588	Aspergillus flavus	27.29	1.00e-33	135.00
IUUC-Afu-009093	Aspergillus fumigatus	29.46	3.00e-24	104.00
IUUC-Aor-010024	Aspergillus oryzae	27.29	1.00e-33	135.00
IUUC-Ate-010448	Aspergillus terreus	27.24	4.00e-33	134.00
IUUC-Ame-011651	Astyanax mexicanus	28.87	6.00e-44	169.00
IUUC-Bgr-012118	Blumeria graminis	30.11	8.00e-36	142.00
IUUC-Bta-012833	Bos taurus	29.10	3.00e-46	177.00
IUUC-Bci-013724	Botrytis cinerea	29.50	2.00e-31	128.00
IUUC-Bdi-014289	Brachypodium distachyon	30.46	2.00e-51	194.00
IUUC-Bol-015313	Brassica oleracea	29.11	2.00e-46	177.00
IUUC-Bra-017115	Brassica rapa	29.39	1.00e-41	162.00
IUUC-Cja-019433	Callithrix jacchus	29.94	1.00e-47	182.00
IUUC-Cfa-020093	Canis familiaris	29.10	3.00e-47	180.00
IUUC-Cpo-021742	Cavia porcellus	29.66	4.00e-47	179.00
IUUC-Cre-022781	Chlamydomonas reinhardtii	33.06	8.00e-48	182.00
IUUC-Csa-023498	Chlorocebus sabaeus	29.66	1.00e-47	182.00
IUUC-Cho-024628	Choloepus hoffmanni	28.07	1.00e-33	134.00
IUUC-Cin-025244	Ciona intestinalis	27.40	2.00e-34	137.00
IUUC-Csv-026218	Ciona savignyi	30.87	8.00e-42	162.00
IUUC-Cne-026911	Cryptococcus neoformans	32.41	1.00e-53	201.00
IUUC-Dre-028528	Danio rerio	31.71	2.00e-46	177.00
IUUC-Dno-029297	Dasypus novemcinctus	29.66	4.00e-47	180.00
IUUC-Dse-031205	Dothistroma septosporum	27.29	5.00e-33	134.00
IUUC-Dme-031587	Drosophila melanogaster	25.20	8.00e-25	106.00
IUUC-Ete-033100	Echinops telfairi	30.49	1.00e-28	118.00
IUUC-Eca-034277	Equus caballus	29.38	3.00e-47	180.00
IUUC-Eeu-035052	Erinaceus europaeus	24.52	4.00e-17	80.50
IUUC-Fca-036115	Felis catus	29.10	4.00e-47	180.00
IUUC-Fal-036864	Ficedula albicollis	30.51	8.00e-51	192.00
IUUC-Fox-037970	Fusarium oxysporum	26.28	8.00e-27	112.00
IUUC-Fso-038432	Fusarium solani	25.69	3.00e-26	110.00
IUUC-Gmo-039090	Gadus morhua	28.01	5.00e-30	122.00
IUUC-Ggr-040066	Gaeumannomyces graminis	27.54	3.00e-20	91.30
IUUC-Gga-040545	Gallus gallus	31.36	1.00e-51	194.00
IUUC-Gac-042027	Gasterosteus aculeatus	32.10	2.00e-54	204.00
IUUC-Gma-044168	Glycine max	29.89	2.00e-45	174.00
IUUC-Ggo-045036	Gorilla gorilla	29.66	1.00e-47	181.00
IUUC-Hsa-046749	Homo sapiens	29.66	1.00e-47	181.00
IUUC-Hvu-047217	Hordeum vulgare	30.14	1.00e-51	195.00
IUUC-Itr-048114	Ictidomys tridecemlineatus	29.66	4.00e-47	179.00
IUUC-Kpa-049147	Komagataella pastoris	29.76	3.00e-37	147.00
IUUC-Lch-049747	Latimeria chalumnae	29.45	6.00e-38	149.00
IUUC-Lpe-051433	Leersia perrieri	29.14	6.00e-47	179.00
IUUC-Loc-052406	Lepisosteus oculatus	29.07	2.00e-48	184.00
IUUC-Lma-053153	Leptosphaeria maculans	27.21	7.00e-34	136.00
IUUC-Laf-053901	Loxodonta africana	29.38	1.00e-46	178.00
IUUC-Mcc-054990	Macaca mulatta	29.66	3.00e-47	180.00
IUUC-Meu-056844	Macropus eugenii	29.10	2.00e-44	171.00
IUUC-Mor-056975	Magnaporthe oryzae	26.40	2.00e-26	111.00
IUUC-Mtr-057759	Medicago truncatula	30.29	5.00e-44	169.00
IUUC-Mla-058856	Melampsora laricipopulina	33.14	1.00e-57	214.00
IUUC-Mga-059749	Meleagris gallopavo	31.07	1.00e-51	194.00
IUUC-Mvi-060237	Microbotryum violaceum	35.16	8.00e-62	229.00
IUUC-Mmr-061270	Microcebus murinus	27.76	2.00e-43	168.00
IUUC-Mdo-062965	Monodelphis domestica	28.81	6.00e-46	176.00
IUUC-Mmu-064081	Mus musculus	29.66	1.00e-46	178.00
IUUC-Mac-065236	Musa acuminata	29.94	5.00e-48	182.00
IUUC-Mpu-066355	Mustela putorius furo	29.38	1.00e-47	181.00
IUUC-Mlu-067630	Myotis lucifugus	29.30	2.00e-45	174.00
IUUC-Ncr-068720	Neurospora crassa	28.17	3.00e-26	111.00
IUUC-Nle-069701	Nomascus leucogenys	29.66	1.00e-47	181.00
IUUC-Opr-070337	Ochotona princeps	27.68	2.00e-38	150.00
IUUC-Ont-072614	Oreochromis niloticus	32.67	4.00e-54	203.00
IUUC-Ocu-073912	Oryctolagus cuniculus	29.66	2.00e-47	181.00
IUUC-Oba-075195	Oryza barthii	28.61	6.00e-48	182.00
IUUC-Obr-076059	Oryza brachyantha	28.82	3.00e-49	187.00
IUUC-Ogl-077318	Oryza glaberrima	28.82	3.00e-50	190.00
IUUC-Ogu-078579	Oryza glumaepatula	28.36	2.00e-48	184.00
IUUC-Oin-079340	Oryza indica	28.82	3.00e-50	190.00
IUUC-Olo-080813	Oryza longistaminata	28.96	1.00e-48	185.00
IUUC-Ome-081420	Oryza meridionalis	29.52	2.00e-48	184.00
IUUC-Oni-082650	Oryza nivara	28.61	6.00e-48	182.00
IUUC-Opu-083832	Oryza punctata	29.82	3.00e-50	190.00
IUUC-Oru-084207	Oryza rufipogon	28.61	6.00e-48	182.00
IUUC-Osa-085708	Oryza sativa	28.82	3.00e-50	190.00
IUUC-Ola-087164	Oryzias latipes	31.82	7.00e-52	195.00
IUUC-Olu-087824	Ostreococcus lucimarinus	34.27	3.00e-38	150.00
IUUC-Oga-088864	Otolemur garnettii	29.38	6.00e-47	179.00
IUUC-Oar-090115	Ovis aries	29.38	6.00e-47	179.00
IUUC-Ptr-091398	Pan troglodytes	29.66	1.00e-47	181.00
IUUC-Pan-092002	Papio anubis	29.66	2.00e-47	181.00
IUUC-Psi-093979	Pelodiscus sinensis	36.26	1.00e-29	121.00
IUUC-Pma-094618	Petromyzon marinus	28.82	1.00e-38	151.00
IUUC-Pno-095088	Phaeosphaeria nodorum	26.76	2.00e-30	126.00
IUUC-Ppa-095351	Physcomitrella patens	32.95	8.00e-56	209.00
IUUC-Pfo-097078	Poecilia formosa	32.67	9.00e-53	198.00
IUUC-Pab-098540	Pongo abelii	29.66	1.00e-47	181.00
IUUC-Pop-099140	Populus trichocarpa	31.59	4.00e-50	189.00
IUUC-Pca-101072	Procavia capensis	29.02	2.00e-44	171.00
IUUC-Ppe-101979	Prunus persica	30.23	4.00e-47	179.00
IUUC-Pva-102400	Pteropus vampyrus	25.42	8.00e-34	135.00
IUUC-Pgr-103362	Puccinia graminis	34.17	9.00e-65	238.00
IUUC-Ptt-103756	Puccinia triticina	38.08	1.00e-47	181.00
IUUC-Pte-104401	Pyrenophora teres	25.95	6.00e-26	110.00
IUUC-Pyt-104510	Pyrenophora triticirepentis	25.95	1.00e-23	102.00
IUUC-Rno-105672	Rattus norvegicus	29.66	6.00e-47	179.00
IUUC-Sce-106242	Saccharomyces cerevisiae	26.11	5.00e-23	100.00
IUUC-Sja-107693	Schizosaccharomyces japonicus	76.14	3.00e-167	578.00
IUUC-Smo-109168	Selaginella moellendorffii	35.82	2.00e-54	204.00
IUUC-Sit-109978	Setaria italica	30.29	5.00e-50	189.00
IUUC-Sly-111316	Solanum lycopersicum	29.48	2.00e-48	184.00
IUUC-Stu-111956	Solanum tuberosum	29.77	3.00e-48	183.00
IUUC-Sbi-114189	Sorghum bicolor	31.18	6.00e-47	179.00
IUUC-Sre-115029	Sporisorium reilianum	35.53	7.00e-56	209.00
IUUC-Ssc-116045	Sus scrofa	26.70	6.00e-32	129.00
IUUC-Tgu-117514	Taeniopygia guttata	30.51	2.00e-51	194.00
IUUC-Tru-117851	Takifugu rubripes	31.01	8.00e-51	192.00
IUUC-Tsy-119140	Tarsius syrichta	27.42	5.00e-37	146.00
IUUC-Tni-120248	Tetraodon nigroviridis	31.79	1.00e-52	198.00
IUUC-Tca-121686	Theobroma cacao	28.33	2.00e-41	160.00
IUUC-Tre-122058	Trichoderma reesei	27.68	2.00e-28	118.00
IUUC-Tvi-122350	Trichoderma virens	28.81	1.00e-29	122.00
IUUC-Tae-123968	Triticum aestivum	29.86	7.00e-52	195.00
IUUC-Tur-126174	Triticum urartu	30.24	8.00e-50	188.00
IUUC-Tme-127079	Tuber melanosporum	32.69	3.00e-24	104.00
IUUC-Ttr-128182	Tursiops truncatus	29.10	3.00e-45	174.00
IUUC-Uma-129624	Ustilago maydis	31.96	6.00e-58	216.00
IUUC-Vda-129787	Verticillium dahliae	26.39	7.00e-30	123.00
IUUC-Vpa-130605	Vicugna pacos	24.38	9.00e-31	125.00
IUUC-Vvi-131319	Vitis vinifera	29.19	8.00e-51	192.00
IUUC-Xtr-132193	Xenopus tropicalis	33.80	3.00e-54	204.00
IUUC-Xma-133880	Xiphophorus maculatus	32.67	8.00e-53	199.00
IUUC-Yli-134520	Yarrowia lipolytica	27.90	5.00e-40	156.00
IUUC-Zma-135877	Zea mays	30.15	2.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence