iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000055433.1	ENSRNOT00000088822.1	ENSRNOP00000075503.1
ENSRNOG00000055433.1	ENSRNOT00000077074.1	ENSRNOP00000075661.1
ENSRNOG00000055433.1	ENSRNOT00000092093.1	ENSRNOP00000073021.1
ENSRNOG00000055433.1	ENSRNOT00000088199.1	ENSRNOP00000071982.1
ENSRNOG00000055433.1	ENSRNOT00000089781.1	ENSRNOP00000070340.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.4	33	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw................pglknssskefr................................ 41
           C++C+e++k+ plvlpC H  ++ C   +                p ++                                        
   Q: 33   CPVCQEMYKQ-PLVLPCTHNVCQACAREVlgqqgyighggdpssePTSP-------Astpstrsprlsrrtlpkpdrldrllksgfgty 113
           ********99.**************877755555566644443332222.......133444456666667777777777777777777 PP
   S: 42   ................CPlC 45
                           CP C
   Q: 114  pgrkrgalhpqtilfpCPAC 133
           77777777777777777777 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAEGEDMQTF TSIMDALVRI STSMKNMEKE LLCPVCQEMY KQPLVLPCTH NVCQACAREV 60
LGQQGYIGHG GDPSSEPTSP ASTPSTRSPR LSRRTLPKPD RLDRLLKSGF GTYPGRKRGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCAGTGATA TCTAACCCTC CCCACCCCTC CCTACACCCC ACCCGGCTCC TGCATTAAGC 60
CCCGGGTTCG CAGCAGCAGC CAGGATCGTG CACCCGGGGG CGGGCGGGCA CAGTAGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR003961--FN3_dom
IPR013783--Ig-like_fold
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50853--FN3
PS50119--ZF_BBOX
PS00518--ZF_RING_1

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:1904115--C:axon cytoplasm
GO:0043194--C:axon initial segment
GO:1990769--C:proximal neuron projection
GO:0008270--F:zinc ion binding
GO:0048490--P:anterograde synaptic vesicle transport
GO:0007409--P:axonogenesis
GO:0001578--P:microtubule bundle formation
GO:0001764--P:neuron migration
GO:0099612--P:protein localization to axon

KEGG

rno:310641

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001433	Ailuropoda melanoleuca	92.63	0.00e+00	945.00
IUUC-Apl-003350	Anas platyrhynchos	63.23	0.00e+00	628.00
IUUC-Ame-011708	Astyanax mexicanus	58.94	2.00e-177	615.00
IUUC-Bta-012983	Bos taurus	97.54	0.00e+00	1009.00
IUUC-Cja-018992	Callithrix jacchus	97.35	0.00e+00	1008.00
IUUC-Cfa-020108	Canis familiaris	95.93	0.00e+00	962.00
IUUC-Cpo-022537	Cavia porcellus	95.82	0.00e+00	792.00
IUUC-Csa-023757	Chlorocebus sabaeus	97.54	0.00e+00	1011.00
IUUC-Dre-027914	Danio rerio	57.39	6.00e-165	574.00
IUUC-Dno-029447	Dasypus novemcinctus	97.92	0.00e+00	1014.00
IUUC-Dor-030163	Dipodomys ordii	97.35	0.00e+00	1003.00
IUUC-Eca-033632	Equus caballus	97.35	0.00e+00	1009.00
IUUC-Fca-036188	Felis catus	96.13	0.00e+00	736.00
IUUC-Fal-037431	Ficedula albicollis	72.78	0.00e+00	701.00
IUUC-Gmo-039199	Gadus morhua	54.24	4.00e-150	525.00
IUUC-Gac-041603	Gasterosteus aculeatus	56.96	5.00e-175	608.00
IUUC-Ggo-045326	Gorilla gorilla	97.92	0.00e+00	1013.00
IUUC-Hsa-046475	Homo sapiens	97.92	0.00e+00	1013.00
IUUC-Itr-048505	Ictidomys tridecemlineatus	97.16	0.00e+00	1018.00
IUUC-Lch-049891	Latimeria chalumnae	62.64	0.00e+00	659.00
IUUC-Laf-053620	Loxodonta africana	96.23	0.00e+00	1011.00
IUUC-Mcc-055666	Macaca mulatta	97.73	0.00e+00	1018.00
IUUC-Mmr-060777	Microcebus murinus	98.11	0.00e+00	1014.00
IUUC-Mdo-062526	Monodelphis domestica	92.29	0.00e+00	746.00
IUUC-Mmu-063938	Mus musculus	99.43	0.00e+00	1023.00
IUUC-Mpu-066543	Mustela putorius furo	95.35	0.00e+00	855.00
IUUC-Mlu-067086	Myotis lucifugus	92.63	0.00e+00	947.00
IUUC-Nle-070157	Nomascus leucogenys	97.92	0.00e+00	1011.00
IUUC-Ont-071483	Oreochromis niloticus	58.89	0.00e+00	629.00
IUUC-Ocu-073837	Oryctolagus cuniculus	96.79	0.00e+00	999.00
IUUC-Ola-086452	Oryzias latipes	57.54	1.00e-173	603.00
IUUC-Oga-088518	Otolemur garnettii	97.54	0.00e+00	1011.00
IUUC-Oar-089791	Ovis aries	94.71	0.00e+00	970.00
IUUC-Ptr-091585	Pan troglodytes	97.92	0.00e+00	1013.00
IUUC-Pan-092902	Papio anubis	95.09	0.00e+00	1014.00
IUUC-Pfo-096276	Poecilia formosa	57.38	3.00e-177	615.00
IUUC-Pab-098589	Pongo abelii	97.92	0.00e+00	1013.00
IUUC-Pva-103153	Pteropus vampyrus	94.52	0.00e+00	972.00
IUUC-Sha-107412	Sarcophilus harrisii	92.82	0.00e+00	984.00
IUUC-Ssc-115661	Sus scrofa	97.92	0.00e+00	1013.00
IUUC-Tru-117886	Takifugu rubripes	57.33	2.00e-179	622.00
IUUC-Tni-120625	Tetraodon nigroviridis	57.57	2.00e-169	589.00
IUUC-Ttr-129000	Tursiops truncatus	96.79	0.00e+00	1005.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence