iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000005045.1	ENSPSIT00000005482.1	ENSPSIP00000005450.1
ENSPSIG00000005045.1	ENSPSIT00000005484.1	ENSPSIP00000005452.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-20	71.8	389	420

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH+++v+cl+      +ll sGs D+tikvWD+
   Q: 389  GHQGPVWCLCVysiG-DLLFSGSSDKTIKVWDT 420
           8********965643.89**************6 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MSSNKSARYN RFSSGAANIT TSDNTNGTRM ETTFGPAYST VTTITKADGT NTFKQHRRTP 60
SSSSTLTYSP RDEDDGMPPI STPRRSDSAI SVRSLHSESS MSLRSTFSLH EEEEEPEPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTCAA ACAAGAGCGC TCGCTACAAT CGCTTCTCCA GTGGCGCAGC AAACATCACG 60
ACTTCTGACA ACACTAACGG GGTAAGCGGA GCAGGGGCCG GAAATAGGGA GTGGGGGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR008974--TRAF-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
IPR001293--Znf_TRAF

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2
PS50145--ZF_TRAF

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0005886--C:plasma membrane
GO:0000151--C:ubiquitin ligase complex
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0000185--P:activation of MAPKKK activity
GO:0006915--P:apoptotic process
GO:2001235--P:positive regulation of apoptotic signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001971	Ailuropoda melanoleuca	85.26	0.00e+00	1026.00
IUUC-Apl-004098	Anas platyrhynchos	90.98	0.00e+00	1050.00
IUUC-Aca-004852	Anolis carolinensis	84.59	0.00e+00	915.00
IUUC-Ame-011275	Astyanax mexicanus	82.08	0.00e+00	904.00
IUUC-Bta-013153	Bos taurus	86.31	0.00e+00	1036.00
IUUC-Cja-019243	Callithrix jacchus	85.35	0.00e+00	1032.00
IUUC-Cfa-020036	Canis familiaris	86.46	0.00e+00	1050.00
IUUC-Cpo-022194	Cavia porcellus	85.99	0.00e+00	1047.00
IUUC-Csa-023363	Chlorocebus sabaeus	86.62	0.00e+00	1049.00
IUUC-Cin-025279	Ciona intestinalis	53.12	0.00e+00	635.00
IUUC-Csv-026163	Ciona savignyi	57.45	1.00e-174	606.00
IUUC-Cme-027264	Cyanidioschyzon merolae	48.65	7.00e-11	63.50
IUUC-Dre-027998	Danio rerio	84.81	0.00e+00	949.00
IUUC-Dno-029356	Dasypus novemcinctus	89.73	6.00e-119	419.00
IUUC-Dor-030750	Dipodomys ordii	84.21	0.00e+00	1008.00
IUUC-Eca-033671	Equus caballus	72.56	0.00e+00	802.00
IUUC-Eeu-034765	Erinaceus europaeus	81.51	4.00e-119	421.00
IUUC-Fca-035843	Felis catus	86.62	0.00e+00	1055.00
IUUC-Fal-037237	Ficedula albicollis	90.13	0.00e+00	1097.00
IUUC-Gmo-038779	Gadus morhua	75.20	0.00e+00	857.00
IUUC-Gga-040579	Gallus gallus	90.45	0.00e+00	1100.00
IUUC-Gac-042233	Gasterosteus aculeatus	79.87	0.00e+00	958.00
IUUC-Ggo-045147	Gorilla gorilla	85.99	0.00e+00	1043.00
IUUC-Hsa-046117	Homo sapiens	86.15	0.00e+00	1045.00
IUUC-Itr-048899	Ictidomys tridecemlineatus	86.31	0.00e+00	1047.00
IUUC-Lch-050593	Latimeria chalumnae	86.80	0.00e+00	1033.00
IUUC-Loc-052444	Lepisosteus oculatus	85.78	0.00e+00	1063.00
IUUC-Laf-053499	Loxodonta africana	80.53	0.00e+00	964.00
IUUC-Mcc-055038	Macaca mulatta	86.46	0.00e+00	1047.00
IUUC-Meu-056610	Macropus eugenii	91.24	0.00e+00	893.00
IUUC-Mga-060183	Meleagris gallopavo	89.84	0.00e+00	1092.00
IUUC-Mmr-061133	Microcebus murinus	86.76	0.00e+00	1054.00
IUUC-Mdo-062312	Monodelphis domestica	87.60	0.00e+00	1061.00
IUUC-Mmu-063844	Mus musculus	86.62	0.00e+00	1020.00
IUUC-Mpu-066552	Mustela putorius furo	85.99	0.00e+00	1027.00
IUUC-Mlu-067719	Myotis lucifugus	86.46	0.00e+00	1020.00
IUUC-Nle-070045	Nomascus leucogenys	87.14	0.00e+00	979.00
IUUC-Opr-070927	Ochotona princeps	83.12	0.00e+00	998.00
IUUC-Ont-072680	Oreochromis niloticus	80.52	0.00e+00	984.00
IUUC-Oan-073521	Ornithorhynchus anatinus	94.19	8.00e-44	167.00
IUUC-Ola-087454	Oryzias latipes	81.83	0.00e+00	1022.00
IUUC-Oga-088380	Otolemur garnettii	86.15	0.00e+00	1045.00
IUUC-Oar-089558	Ovis aries	68.06	0.00e+00	772.00
IUUC-Ptr-091606	Pan troglodytes	85.99	0.00e+00	1043.00
IUUC-Pan-092227	Papio anubis	86.46	0.00e+00	1047.00
IUUC-Pma-094541	Petromyzon marinus	78.80	3.00e-148	517.00
IUUC-Pfo-096237	Poecilia formosa	79.54	0.00e+00	972.00
IUUC-Pab-097589	Pongo abelii	86.15	0.00e+00	1045.00
IUUC-Pca-100375	Procavia capensis	83.76	0.00e+00	986.00
IUUC-Pva-102434	Pteropus vampyrus	86.78	0.00e+00	1056.00
IUUC-Rno-105443	Rattus norvegicus	86.94	0.00e+00	1025.00
IUUC-Sha-106517	Sarcophilus harrisii	87.30	0.00e+00	1056.00
IUUC-Ssc-115990	Sus scrofa	85.83	0.00e+00	1043.00
IUUC-Tgu-117222	Taeniopygia guttata	89.81	0.00e+00	1092.00
IUUC-Tru-118392	Takifugu rubripes	82.93	0.00e+00	979.00
IUUC-Tni-120220	Tetraodon nigroviridis	81.96	0.00e+00	969.00
IUUC-Tbe-128045	Tupaia belangeri	83.06	1.00e-115	410.00
IUUC-Ttr-128203	Tursiops truncatus	82.64	0.00e+00	983.00
IUUC-Xtr-132043	Xenopus tropicalis	86.46	0.00e+00	1062.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence