iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126339

Ensembl Protein ID

TRIUR3_16797-P1

UniProt Accession

M7ZYX2; M7ZYX2_TRIUA

Genbank Protein ID

EMS65257.1

Protein Name

Zinc finger CCCH domain-containing protein 17

Genbank Nucleotide ID

KD045998

Gene Name

TRIUR3_16797

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_16797	TRIUR3_16797-T1	TRIUR3_16797-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-23	81.7	124	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgvll 36
           gH++ +t+++    s + l sGs Dg+++vWD  +g+++
   Q: 124  GHEEAITGISMpmgS-DKLYSGSADGSVRVWDGNSGKCV 161
           8*********97754.889*************9999997 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEAIACREAL SLAEELMIQS FVVASESKQI VNGIQKETNG TYDKIIAEIK NRAQMFNCSF 60
TFEGRAANSD ADRLAKFSIS LDLKKSDPKT DPKPAGTNPE PIQEPRVEES RGCGGFAFLC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAAGCCA TTGCTTGTCG TGAAGCCCTC TCATTAGCCG AGGAGTTGAT GATACAAAGC 60
TTCGTGGTAG CTTCGGAATC GAAGCAAATT GTGAATGGCA TTCAGAAGGA GACAAACGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR012337--RNaseH-like_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000399	Aegilops tauschii	82.68	2.00e-158	550.00
IUUC-Aml-001971	Ailuropoda melanoleuca	25.10	1.00e-16	80.50
IUUC-Bta-013153	Bos taurus	25.10	1.00e-16	80.50
IUUC-Bdi-014959	Brachypodium distachyon	79.52	3.00e-119	421.00
IUUC-Csa-023363	Chlorocebus sabaeus	25.10	1.00e-16	80.50
IUUC-Cin-025279	Ciona intestinalis	27.45	1.00e-16	80.50
IUUC-Eca-033671	Equus caballus	27.02	3.00e-17	82.80
IUUC-Fca-035843	Felis catus	25.10	1.00e-16	80.90
IUUC-Lpe-051507	Leersia perrieri	63.95	2.00e-93	334.00
IUUC-Mmu-063844	Mus musculus	25.10	1.00e-16	80.50
IUUC-Mlu-067719	Myotis lucifugus	25.10	1.00e-16	80.50
IUUC-Nle-070045	Nomascus leucogenys	24.70	3.00e-16	79.30
IUUC-Opr-070927	Ochotona princeps	25.62	1.00e-16	80.50
IUUC-Oba-075357	Oryza barthii	74.87	3.00e-83	300.00
IUUC-Obr-076846	Oryza brachyantha	74.19	5.00e-106	376.00
IUUC-Ogl-077192	Oryza glaberrima	81.44	1.00e-79	288.00
IUUC-Ogu-077987	Oryza glumaepatula	71.55	1.00e-96	346.00
IUUC-Oin-079320	Oryza indica	81.30	3.00e-110	390.00
IUUC-Olo-080642	Oryza longistaminata	79.45	1.00e-100	361.00
IUUC-Ome-081921	Oryza meridionalis	79.53	3.00e-99	354.00
IUUC-Oni-082030	Oryza nivara	60.31	5.00e-121	426.00
IUUC-Opu-083302	Oryza punctata	74.58	3.00e-102	364.00
IUUC-Oru-085210	Oryza rufipogon	71.65	2.00e-105	375.00
IUUC-Oga-088380	Otolemur garnettii	25.10	1.00e-16	80.90
IUUC-Pop-099244	Populus trichocarpa	55.05	3.00e-73	268.00
IUUC-Pva-102434	Pteropus vampyrus	25.10	1.00e-16	80.90
IUUC-Smo-109306	Selaginella moellendorffii	43.33	2.00e-49	188.00
IUUC-Sit-110042	Setaria italica	77.83	1.00e-106	379.00
IUUC-Sbi-114302	Sorghum bicolor	70.37	8.00e-108	382.00
IUUC-Tae-123685	Triticum aestivum	98.80	3.00e-149	520.00
IUUC-Xtr-132043	Xenopus tropicalis	26.69	8.00e-18	84.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence