iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-118233

UUCD1 version

UUC-TaR-00802

Ensembl Protein ID

ENSTRUP00000037844.1

UniProt Accession

H2ULM3; H2ULM3_TAKRU

Protein Name

Uncharacterized protein

Gene Name

wdr47a (1 of many); wdr47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000014812.1	ENSTRUT00000037980.1	ENSTRUP00000037844.1
ENSTRUG00000014812.1	ENSTRUT00000037981.1	ENSTRUP00000037845.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-26	92.5	749	785
UBD/Beta-Prp	9.20e-48	164.2	652	911

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsd.tllvsGsdDgtikvWDlrtgvll 36
           gHt+ + +l  + + ++++sGs D+t++ WDlr   ++
   Q: 749  GHTGHILSLYtW-GgWMIASGSQDKTVRFWDLRVPSCV 785
           8*******9669.44*****************988887 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl......lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlst 83
           ++hhk+ i+cv++s  ++llatgs d+ +kv  ++ +++        ++s h+++++++ f +  +    il++++  D +i+  d + 
   Q: 652  NKHHKGSIYCVAWSHCGQLLATGSNDKYVKVLPFSAETCnategpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCQR 740
           68**********************************9999999998899************987667778777765516788888**** PP
   S: 84   gkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
           g+ +h+l+gh+  +lsl     g  ++sGs+d+t+r wdl+  +c++     + g  + v +v+v+p+g+ll++G  D++++l+d++ g
   Q: 741  GQGLHALSGHTGHILSLYTWG-GWMIASGSQDKTVRFWDLRVPSCVRVvgtAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDVRGG 828
           ****************98888.9***********************999999************************************* PP
   S: 170  kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           ++++  +  h ++v+s+ f++   +l++gs+d++v + +lq    ++  + t+ +h d v + r + +d  ++s s+D+++ +W
   Q: 829  RIVQVYRP-HSSDVRSVRFSPGAHYLLTGSYDTKVMVTNLQgdltKQLPLTTVGEHGDKVIQCRWHTQDLSFLSSSADRTVTLW 911
           *******9.********************************99977778*********************************** PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MTAEETINVK EVEIIKVVLD FLNSRKLHIS MLALEKESGV INGLYSDDML FLRQLVLDGQ 60
WDEVLQFIQP LEFMEKFDRR RFRYIVLKQK FLEALCVNNA MSAEDEPQHL EFTMQEAVKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACAGCGG AAGAAACCAT CAATGTGAAG GAGGTGGAGA TCATTAAAGT GGTCCTGGAC 60
TTCCTCAACT CTAGGAAGCT GCACATCAGC ATGCTGGCGC TTGAGAAGGA GAGCGGCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	75.48	0.00e+00	1239.00
IUUC-Apl-003954	Anas platyrhynchos	76.40	0.00e+00	1253.00
IUUC-Aca-004766	Anolis carolinensis	76.90	0.00e+00	1256.00
IUUC-Bta-013072	Bos taurus	75.32	0.00e+00	1230.00
IUUC-Cja-018835	Callithrix jacchus	75.48	0.00e+00	1243.00
IUUC-Cfa-020380	Canis familiaris	71.30	0.00e+00	697.00
IUUC-Cpo-021883	Cavia porcellus	75.51	0.00e+00	1240.00
IUUC-Csa-023467	Chlorocebus sabaeus	75.94	0.00e+00	1245.00
IUUC-Cho-024342	Choloepus hoffmanni	67.74	0.00e+00	1084.00
IUUC-Cin-025112	Ciona intestinalis	44.89	7.00e-74	270.00
IUUC-Dre-027530	Danio rerio	81.48	0.00e+00	1315.00
IUUC-Dno-029290	Dasypus novemcinctus	75.86	0.00e+00	1241.00
IUUC-Dor-030258	Dipodomys ordii	83.12	4.00e-173	602.00
IUUC-Dme-032040	Drosophila melanogaster	51.18	5.00e-100	357.00
IUUC-Ete-032248	Echinops telfairi	66.30	1.00e-153	536.00
IUUC-Eca-033623	Equus caballus	76.19	0.00e+00	1239.00
IUUC-Fca-036425	Felis catus	73.15	0.00e+00	1056.00
IUUC-Fal-036661	Ficedula albicollis	75.43	0.00e+00	1241.00
IUUC-Gmo-039527	Gadus morhua	81.32	0.00e+00	1363.00
IUUC-Gga-041177	Gallus gallus	76.43	0.00e+00	1246.00
IUUC-Gac-042049	Gasterosteus aculeatus	85.49	0.00e+00	1477.00
IUUC-Ggo-044833	Gorilla gorilla	75.59	0.00e+00	1245.00
IUUC-Hsa-046084	Homo sapiens	75.59	0.00e+00	1244.00
IUUC-Lch-050313	Latimeria chalumnae	72.07	0.00e+00	1221.00
IUUC-Loc-051790	Lepisosteus oculatus	78.90	0.00e+00	1337.00
IUUC-Laf-053521	Loxodonta africana	75.73	0.00e+00	1246.00
IUUC-Mcc-055053	Macaca mulatta	75.94	0.00e+00	1245.00
IUUC-Meu-056734	Macropus eugenii	77.00	1.00e-156	547.00
IUUC-Mga-059381	Meleagris gallopavo	76.76	0.00e+00	1258.00
IUUC-Mmr-060859	Microcebus murinus	75.59	0.00e+00	1240.00
IUUC-Mdo-062501	Monodelphis domestica	75.90	0.00e+00	1161.00
IUUC-Mmu-063126	Mus musculus	76.15	0.00e+00	1243.00
IUUC-Mpu-066718	Mustela putorius furo	73.27	0.00e+00	931.00
IUUC-Mlu-067246	Myotis lucifugus	75.84	0.00e+00	1244.00
IUUC-Nle-069807	Nomascus leucogenys	75.48	0.00e+00	1240.00
IUUC-Opr-070862	Ochotona princeps	88.99	4.00e-56	213.00
IUUC-Ont-072519	Oreochromis niloticus	92.56	0.00e+00	1576.00
IUUC-Oan-072740	Ornithorhynchus anatinus	75.96	0.00e+00	632.00
IUUC-Ocu-074898	Oryctolagus cuniculus	75.84	0.00e+00	1235.00
IUUC-Ola-086396	Oryzias latipes	89.06	0.00e+00	1552.00
IUUC-Oga-088563	Otolemur garnettii	75.16	0.00e+00	1234.00
IUUC-Oar-089926	Ovis aries	75.73	0.00e+00	1236.00
IUUC-Ptr-090706	Pan troglodytes	75.48	0.00e+00	1242.00
IUUC-Pan-091740	Papio anubis	75.94	0.00e+00	1245.00
IUUC-Psi-093938	Pelodiscus sinensis	75.13	0.00e+00	1239.00
IUUC-Pfo-096531	Poecilia formosa	90.00	0.00e+00	1535.00
IUUC-Pab-098312	Pongo abelii	75.94	0.00e+00	1247.00
IUUC-Pca-101100	Procavia capensis	83.25	1.00e-169	590.00
IUUC-Pva-102734	Pteropus vampyrus	71.25	5.00e-157	548.00
IUUC-Rno-105625	Rattus norvegicus	75.73	0.00e+00	1236.00
IUUC-Sha-106999	Sarcophilus harrisii	73.96	0.00e+00	1192.00
IUUC-Sar-112988	Sorex araneus	64.24	0.00e+00	847.00
IUUC-Ssc-115384	Sus scrofa	75.75	0.00e+00	1228.00
IUUC-Tgu-116808	Taeniopygia guttata	76.24	0.00e+00	1243.00
IUUC-Tsy-119509	Tarsius syrichta	82.98	5.00e-168	584.00
IUUC-Tni-120473	Tetraodon nigroviridis	93.14	0.00e+00	1640.00
IUUC-Tbe-127447	Tupaia belangeri	74.16	3.00e-119	422.00
IUUC-Ttr-128459	Tursiops truncatus	75.38	0.00e+00	1167.00
IUUC-Vpa-130258	Vicugna pacos	66.00	0.00e+00	679.00
IUUC-Xtr-132609	Xenopus tropicalis	72.09	0.00e+00	1177.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence