iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aml-001534

Ensembl Protein ID

ENSAMEP00000008624.1

UniProt Accession

G1LNJ6; G1LNJ6_AILME

Genbank Protein ID

ENSAMEP00000008624

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01131353

Gene Name

IFT140

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000008128.1	ENSAMET00000008988.1	ENSAMEP00000008624.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-06	27.1	102	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           Ht ++t l++ ++ + lvsG + g++ +W+l+
   Q: 102  HTTDITVLKWsPNgNCLVSGDRLGVLLLWRLD 133
           9999*******777****************86 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

MALYFDHRIE APDAVGSPSH IHWHPVHPFL AVASVSTTSG GSVDIYLEQG EHVPDAHMER 60
SFRVSSLCWH PTRLMLAVGW ETGEVTVFNK QDKEQHAVPP THTTDITVLK WSPNGNCLVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCTCT ATTTTGACCA CCGAATAGAA GCCCCAGACG CCGTCGGGTC TCCTTCGCAC 60
ATCCATTGGC ACCCTGTTCA CCCATTTCTG GCAGTTGCCT CCGTCAGCAC GACCTCAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005813--C:centrosome
GO:0036064--C:ciliary basal body
GO:0030991--C:intraciliary transport particle A
GO:0032391--C:photoreceptor connecting cilium
GO:0001750--C:photoreceptor outer segment
GO:0007368--P:determination of left/right symmetry
GO:1990403--P:embryonic brain development
GO:0031076--P:embryonic camera-type eye development
GO:0048701--P:embryonic cranial skeleton morphogenesis
GO:0042733--P:embryonic digit morphogenesis
GO:0007507--P:heart development
GO:0035721--P:intraciliary retrograde transport
GO:0021532--P:neural tube patterning
GO:1905515--P:non-motile cilium assembly
GO:0035845--P:photoreceptor cell outer segment organization
GO:0061512--P:protein localization to cilium
GO:1902017--P:regulation of cilium assembly
GO:0008589--P:regulation of smoothened signaling pathway
GO:0072001--P:renal system development
GO:0060041--P:retina development in camera-type eye

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004045	Anas platyrhynchos	67.87	0.00e+00	1120.00
IUUC-Aca-004856	Anolis carolinensis	71.94	0.00e+00	2128.00
IUUC-Bta-013342	Bos taurus	81.63	0.00e+00	2345.00
IUUC-Cel-018591	Caenorhabditis elegans	21.89	2.00e-08	55.50
IUUC-Cja-019368	Callithrix jacchus	80.20	0.00e+00	825.00
IUUC-Cre-022796	Chlamydomonas reinhardtii	33.81	0.00e+00	715.00
IUUC-Csa-023417	Chlorocebus sabaeus	81.87	0.00e+00	2342.00
IUUC-Cin-025150	Ciona intestinalis	46.92	0.00e+00	1313.00
IUUC-Csv-025810	Ciona savignyi	32.11	8.00e-86	310.00
IUUC-Dre-027680	Danio rerio	60.64	0.00e+00	1746.00
IUUC-Eca-033444	Equus caballus	86.18	0.00e+00	2586.00
IUUC-Fca-036025	Felis catus	87.44	0.00e+00	2553.00
IUUC-Gmo-038491	Gadus morhua	62.47	0.00e+00	1696.00
IUUC-Loc-052740	Lepisosteus oculatus	66.94	0.00e+00	1962.00
IUUC-Mpu-065874	Mustela putorius furo	90.71	0.00e+00	2656.00
IUUC-Mlu-067077	Myotis lucifugus	83.41	0.00e+00	2441.00
IUUC-Ont-072303	Oreochromis niloticus	60.47	0.00e+00	1734.00
IUUC-Ola-086338	Oryzias latipes	58.08	0.00e+00	1644.00
IUUC-Ptr-090583	Pan troglodytes	80.63	0.00e+00	2332.00
IUUC-Pan-092689	Papio anubis	81.60	0.00e+00	2335.00
IUUC-Psi-093824	Pelodiscus sinensis	74.71	0.00e+00	2251.00
IUUC-Pma-094497	Petromyzon marinus	59.64	0.00e+00	1742.00
IUUC-Pfo-096612	Poecilia formosa	59.36	0.00e+00	1658.00
IUUC-Pva-102236	Pteropus vampyrus	87.83	0.00e+00	1248.00
IUUC-Sha-106814	Sarcophilus harrisii	82.03	0.00e+00	2428.00
IUUC-Tru-118007	Takifugu rubripes	58.50	0.00e+00	1672.00
IUUC-Ttr-128400	Tursiops truncatus	84.72	0.00e+00	1122.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence