iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098320

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01033507

Gene Name

WDR90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000006918.1	ENSPPYT00000008160.1	ENSPPYP00000007833.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-36	122.7	699	732
UBD/Beta-Prp	2.20e-78	263.5	1304	1603

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           Ht++v +la  +  + l++ s D t+++WDl t 
   Q: 699  HTAPVLALAMeQRrGQLATVSQDRTVRIWDLATL 732
           999*******944489**************9876 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw...dls........tgkcvht 89
           t++++    +ll  g  +g + vwd++ g ++ s + +++++  + fs +   lv+gs+ + +++w    +s        +++ ++ 
   Q: 1304 TSLCY-GAPPLLYCGTSSGQVCVWDTRAGRCFLSWEADDGGIGLLLFSGS--RLVSGSSVGRLRLWavgAVSelrckgsgASSVFME 1387
           55555.444566677778********************************..7*************666223666876655555555 PP
   S: 90   lk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
            +   +  v+s sf+ s d  v+G+   t+    + +g+  + + sgh++ vn vv+ p +  ++++s D+ vr+W l++++l+ ++
   Q: 1388 HElVLDGAVVSASFDDSVDMGVVGTTAGTLWFVSWAEGTSTR-LISGHRSKVNEVVFGPGEAHCATCSEDGSVRVWALASMELVIQF 1473
           545568999*******99************997778888888.88**************99************************** PP
   S: 176  tgghtdsvysls......fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
           +   ++s  +l+       ++++++l++g  dg++++++++++ +  +++ h    + v+fs +++ ++sg +Dg + +   r+g++
   Q: 1474 QV-LNQSCLCLAwsppccGRPEQQRLAAGYGDGSLRIFSVSRTAMELKMHPHPVALTAVAFSTDGQTVLSGDKDGLVAVSHPRTGTT 1559
           98.9********55555555666**************************************************************** PP
   S: 257  lktlqlhn...ssvisvav.....lsfgdnvlvlgse.dskvni 291
            ++l+ h+    s i+v++     l++++  l l+++ d++v +
   Q: 1560 FRVLSDHQgapISTICVTCkecedLGVEGTDLWLAASgDQRVSV 1603
           ********999999999998888888887777666665888876 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MARAWQHPFL SVFRHFRVDE WKRSAKQGDV AVVTDKTLKG AVYRIRGSVS AANYIQLPGS 60
STQSLGLTGR YLYVLFRPLP GKHFVIHLDV STKDNQVIRV SFSNLFKEFK STATWLQFPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGCGGGGC GTGCTCTGCG CTGGGCGCGC GGAGGCCAAG GCGGGAAGCT CGAGCGGCGG 60
CGCCATGGCC CGAGGTAGCG CGCGGCGGGC GGGGGTCCCG GGTTCCGGGA TCCAGGGTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR007714--CFA20/WDR90/C3orf67
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001801	Ailuropoda melanoleuca	69.77	0.00e+00	1352.00
IUUC-Apl-003387	Anas platyrhynchos	51.90	0.00e+00	1494.00
IUUC-Aca-005235	Anolis carolinensis	51.72	0.00e+00	1603.00
IUUC-Ame-011595	Astyanax mexicanus	53.70	0.00e+00	711.00
IUUC-Bta-012328	Bos taurus	68.00	0.00e+00	2041.00
IUUC-Cja-019058	Callithrix jacchus	78.48	0.00e+00	2380.00
IUUC-Cfa-020934	Canis familiaris	65.60	0.00e+00	1890.00
IUUC-Cpo-022025	Cavia porcellus	67.32	0.00e+00	2076.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	28.78	1.00e-59	226.00
IUUC-Csa-023022	Chlorocebus sabaeus	87.78	0.00e+00	2717.00
IUUC-Cin-025133	Ciona intestinalis	33.92	0.00e+00	1012.00
IUUC-Csv-025816	Ciona savignyi	34.68	0.00e+00	905.00
IUUC-Dre-028823	Danio rerio	48.00	0.00e+00	940.00
IUUC-Dno-029211	Dasypus novemcinctus	72.28	0.00e+00	731.00
IUUC-Dor-030211	Dipodomys ordii	71.64	0.00e+00	2054.00
IUUC-Ete-032363	Echinops telfairi	58.86	0.00e+00	887.00
IUUC-Eca-034296	Equus caballus	70.54	0.00e+00	1326.00
IUUC-Eeu-035226	Erinaceus europaeus	60.31	0.00e+00	866.00
IUUC-Fca-035384	Felis catus	60.59	0.00e+00	1907.00
IUUC-Fal-037660	Ficedula albicollis	55.46	0.00e+00	981.00
IUUC-Gga-040666	Gallus gallus	53.72	0.00e+00	1100.00
IUUC-Gac-041358	Gasterosteus aculeatus	46.02	0.00e+00	1377.00
IUUC-Ggo-045121	Gorilla gorilla	90.68	0.00e+00	3052.00
IUUC-Hsa-046289	Homo sapiens	90.97	0.00e+00	2997.00
IUUC-Itr-048485	Ictidomys tridecemlineatus	69.48	0.00e+00	2026.00
IUUC-Lch-050009	Latimeria chalumnae	47.51	0.00e+00	910.00
IUUC-Loc-052629	Lepisosteus oculatus	44.99	0.00e+00	816.00
IUUC-Mcc-055834	Macaca mulatta	84.59	0.00e+00	2476.00
IUUC-Meu-056162	Macropus eugenii	46.92	0.00e+00	723.00
IUUC-Mga-060167	Meleagris gallopavo	51.79	0.00e+00	1466.00
IUUC-Mmr-060761	Microcebus murinus	86.42	2.00e-78	285.00
IUUC-Mdo-061886	Monodelphis domestica	56.36	0.00e+00	1860.00
IUUC-Mmu-063652	Mus musculus	67.59	0.00e+00	2126.00
IUUC-Mlu-068141	Myotis lucifugus	61.13	0.00e+00	1939.00
IUUC-Nle-069133	Nomascus leucogenys	90.81	0.00e+00	2109.00
IUUC-Ont-072496	Oreochromis niloticus	46.30	0.00e+00	1487.00
IUUC-Oan-072833	Ornithorhynchus anatinus	50.10	0.00e+00	889.00
IUUC-Ola-086564	Oryzias latipes	44.86	0.00e+00	1413.00
IUUC-Oga-088919	Otolemur garnettii	73.62	0.00e+00	2259.00
IUUC-Oar-089946	Ovis aries	54.08	0.00e+00	877.00
IUUC-Ptr-090755	Pan troglodytes	90.55	0.00e+00	2558.00
IUUC-Pan-092054	Papio anubis	86.45	0.00e+00	2705.00
IUUC-Psi-093467	Pelodiscus sinensis	53.81	0.00e+00	1697.00
IUUC-Pma-094553	Petromyzon marinus	45.69	0.00e+00	829.00
IUUC-Pfo-096849	Poecilia formosa	45.31	0.00e+00	1318.00
IUUC-Pca-100172	Procavia capensis	64.32	0.00e+00	1977.00
IUUC-Pva-102772	Pteropus vampyrus	70.41	0.00e+00	1355.00
IUUC-Rno-105046	Rattus norvegicus	67.85	0.00e+00	2146.00
IUUC-Sha-107094	Sarcophilus harrisii	56.40	0.00e+00	1898.00
IUUC-Ssc-116257	Sus scrofa	65.12	0.00e+00	1950.00
IUUC-Tgu-117323	Taeniopygia guttata	51.78	0.00e+00	1286.00
IUUC-Tru-118717	Takifugu rubripes	44.96	0.00e+00	1361.00
IUUC-Tni-120108	Tetraodon nigroviridis	47.05	0.00e+00	887.00
IUUC-Ttr-128378	Tursiops truncatus	72.36	0.00e+00	1472.00
IUUC-Xtr-131760	Xenopus tropicalis	49.42	0.00e+00	1502.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence